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1. Full Text The shrinking human gut microbiome
by Moeller, Andrew H
Current Opinion in Microbiology, ISSN 1369-5274, 2017, Volume 38, pp. 30 - 35
Graphical abstract 
Pathology | IMPACT | DIET | COMMUNITY | RICHNESS | ANTIBIOTIC USE | PATTERNS | MICROBIOLOGY | DIVERSITY | OBESE | Microbiota (Symbiotic organisms) | Primates
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2. Dispersal limitation promotes the diversification of the mammalian gut microbiota
by Andrew H Moeller and Taichi A Suzuki and Dana Lin and Eileen A Lacey and Samuel K Wasser and Michael W Nachman
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 12/2017, Volume 114, Issue 52, p. 13768
The gut bacterial communities of mammals have profound effects on host fitness, but the processes that generate and maintain gut bacterial diversity remain... 
Geographical distribution | Divergence | Populations | Sympatric populations | Communities | Spatial discrimination | Phylogeny | Mammals | Biodiversity | Dispersion | Prey | Species diversity | Horizontal transfer | Taxa | Microbiota | Food chains | Diet | Dispersal | Phylogenetics | Western hemisphere | Bacteria | Species | Fitness
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3. Full Text Cospeciation of gut microbiota with hominids
by Moeller, Andrew H and Caro-Quintero, Alejandro and Mjungu, Deus and Georgiev, Alexander V and Lonsdorf, Elizabeth V and Muller, Martin N and Pusey, Anne E and Peeters, Martine and Hahn, Beatrice H and Ochman, Howard
Science, ISSN 0036-8075, 07/2016, Volume 353, Issue 6297, pp. 380 - 382
The evolutionary origins of the bacterial lineages that populate the human gut are unknown. Here we show that multiple lineages of the predominant bacterial... 
BACTERIA | COMMUNITIES | GENOMES | HUMAN-EVOLUTION | MULTIDISCIPLINARY SCIENCES | CHIMPANZEES | Symbiosis | Genome, Bacterial | Species Specificity | Humans | Actinobacteria - classification | Gastrointestinal Microbiome - physiology | Phylogeny | Gastrointestinal Microbiome - genetics | Bacteroidaceae - genetics | Hominidae - microbiology | Biological Evolution | Animals | Actinobacteria - genetics | Bacteroidaceae - physiology | Bacteroidaceae - classification | Actinobacteria - physiology | Genome, Mitochondrial | Cell Nucleus | Apes | Research | Microbiota (Symbiotic organisms) | Analysis | Hominids | Stomach | Bacteria | Evolution & development | Immune systems | Intestines | Chimpanzees | Genes | Concerts | Evolution
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4. Full Text Destabilization of the gut microbiome marks the end-stage of simian immunodeficiency virus infection in wild chimpanzees
: Impact of SIVcpz on the Gut Microbiome
by Barbian, Hannah J and Li, Yingying and Ramirez, Miguel and Klase, Zachary and Lipende, Iddi and Mjungu, Deus and Moeller, Andrew H and Wilson, Michael L and Pusey, Anne E and Lonsdorf, Elizabeth V and Bushman, Frederic D and Hahn, Beatrice H
American Journal of Primatology, ISSN 0275-2565, 01/2018, Volume 80, Issue 1, p. e22515
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5. Full Text Rapid changes in the gut microbiome during human evolution
by Andrew H. Moeller and Yingying Li and Eitel Mpoudi Ngole and Steve Ahuka-Mundeke and Elizabeth V. Lonsdorf and Anne E. Pusey and Martine Peeters and Beatrice H. Hahn and Howard Ochman
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 11/2014, Volume 111, Issue 46, pp. 16431 - 16435
Humans are ecosystems containing trillions of microorganisms, but the evolutionary history of this microbiome is obscured by a lack of knowledge about... 
Human populations | Biological taxonomies | Taxa | Species diversity | Microbiota | Apes | Chimpanzees | Humans | Genera | Bonobos | Gastrointestinal tract | Coevolution | Pan | Gorilla | microbiota | gastrointestinal tract | ENTEROTYPES | coevolution | WILD CHIMPANZEES | MULTIDISCIPLINARY SCIENCES | PATTERNS | DIVERSITY | Americas | Life Style | Species Specificity | Primates - classification | Primates - microbiology | Africa | Phylogeny | Urban Population | Hominidae - microbiology | Genetic Variation | Feces - microbiology | Venezuela | Bacteria - isolation & purification | Animals | Intestines - microbiology | Diet | Genetic Speciation | Bacteria - classification | Population Groups | Hominidae - classification | Microbiological research | Microorganisms | Genetic research | Genetic aspects | Research | Nucleotide sequencing | DNA sequencing | Biological Sciences
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6. Rapid changes in the gut microbiome during human evolution
by Andrew H Moeller and Yingying Li and Eitel Mpoudi Ngole and Steve Ahuka-Mundeke and Elizabeth V Lonsdorf and Anne E Pusey and Martine Peeters and Beatrice H Hahn and Howard Ochman
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 11/2014, Volume 111, Issue 46, p. 16431
  Humans are ecosystems containing trillions of microorganisms, but the evolutionary history of this microbiome is obscured by a lack of knowledge about... 
Microbiology | Digestive system | Evolution | Monkeys & apes
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7. Full Text Response to: The relative utility of sequence divergence and phylogenetic informativeness profiling in phylogenetic study design
by Moeller, Andrew H and Townsend, Jeffrey P
Molecular Phylogenetics and Evolution, ISSN 1055-7903, 01/2013, Volume 66, Issue 1, pp. 436 - 436
EVOLUTIONARY BIOLOGY | BIOCHEMISTRY & MOLECULAR BIOLOGY | GENETICS & HEREDITY | Animals | Bayes Theorem | Phylogeny
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8. Full Text Chimpanzees and humans harbour compositionally similar gut enterotypes
by Moeller, Andrew H and Degnan, Patrick H and Pusey, Anne E and Wilson, Michael L and Hahn, Beatrice H and Ochman, Howard
Nature Communications, ISSN 2041-1723, 2012, Volume 3, Issue 1, pp. 1179 - 1179
Microbes inhabiting the human gastrointestinal tract tend to adopt one of three characteristic community structures, called 'enterotypes', each of which is... 
DIET | MULTIDISCIPLINARY SCIENCES | EVOLUTION | Pan troglodytes - microbiology | Bacteria - isolation & purification | Animals | Time Factors | Humans | Bacteria - classification | Gastrointestinal Tract - microbiology
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9. Full Text Factors that drive variation among gut microbial communities
by Moeller, Andrew H and Ochman, Howard
Gut Microbes, ISSN 1949-0976, 09/2013, Volume 4, Issue 5, pp. 403 - 408
Surveys of humans from around the world have revealed differences in gut microbiota composition among geographically separated populations. But because humans... 
microbiota | Pan troglodytes | enterotypes | Enterotypes | Microbiota | Biological Evolution | Genetic Variation | Pan troglodytes - microbiology | Gastrointestinal Tract - microbiology | Animals | Addendum
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10. Full Text Transmission modes of the mammalian gut microbiota
by Moeller, Andrew H and Suzuki, Taichi A and Phifer-Rixey, Megan and Nachman, Michael W
Science, ISSN 0036-8075, 10/2018, Volume 362, Issue 6413, pp. 453 - 457
Mammals house a diversity of bacteria that affect health in various ways, but the routes by which bacterial lineages are transmitted between hosts remain... 
EVOLUTION | SHAPES | MULTIDISCIPLINARY SCIENCES | DISEASE | HEALTH | VIRULENCE | PATHOGENS | Animals | Bacteria - classification | Bacterial Physiological Phenomena | Bacteria - pathogenicity | Gastrointestinal Microbiome - physiology | Mice | Mice, Inbred Strains | Disease transmission | Microbiota (Symbiotic organisms) | Observations | Mammals | Health aspects | Distribution | Taxa | Microbiota | Offspring | Populations | Rodents | Microbiomes | Bacteria | Inbreeding | Heredity | Human behavior
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11. Full Text Sympatric chimpanzees and gorillas harbor convergent gut microbial communities
by Moeller, Andrew H and Peeters, Martine and Ndjango, Jean-Basco and Li, Yingying and Hahn, Beatrice H and Ochman, Howard
Genome Research, ISSN 1088-9051, 10/2013, Volume 23, Issue 10, pp. 1715 - 1720
The gut microbial communities within great apes have been shown to reflect the phylogenetic history of their hosts, indicating codiversification between great... 
RESPONSES | EVOLUTION | DIET | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMISTRY & MOLECULAR BIOLOGY | GENETICS & HEREDITY | PATTERNS | DIVERGENCE TIMES | Sympatry | Gorilla gorilla - microbiology | Proteobacteria - classification | Pan paniscus - classification | Phylogeny | Pan paniscus - genetics | Proteobacteria - genetics | Africa, Central | Feces - microbiology | Gorilla gorilla - genetics | Microbiota | Genetic Speciation | Actinobacteria - genetics | Bacteria - classification | Pan troglodytes - genetics | Gastrointestinal Tract - microbiology | Actinobacteria - classification | Bacteroidetes - classification | Bacteria - genetics | Pan troglodytes - microbiology | Animals | RNA, Ribosomal, 16S - genetics | Environment | Pan troglodytes - classification | Gorilla gorilla - classification | High-Throughput Nucleotide Sequencing | Genome, Mitochondrial | Pan paniscus - microbiology | Bacteroidetes - genetics | Metagenome | Evolution, Molecular | Epigenetic inheritance | Genetic aspects | Research | Microbiota (Symbiotic organisms)
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12. Full Text Microbiomes are true to type
by Andrew H. Moeller and Howard Ochmana
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 7/2014, Volume 111, Issue 26, pp. 9372 - 9373
Taxa | COMMENTARIES | Microbiota | Diet | Humans | Mice | Bacteroides | GUT MICROBIOME | MULTIDISCIPLINARY SCIENCES | ENTEROTYPES | Mice - microbiology | Animals | Intestines - microbiology | Animal Feed - analysis | Microbiota - genetics | Bacteria - genetics | Biological Sciences | Commentaries
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13. Full Text The Microbiome in Psychology and Cognitive Neuroscience
by Sarkar, Amar and Harty, Siobhán and Lehto, Soili M and Moeller, Andrew H and Dinan, Timothy G and Dunbar, Robin I.M and Cryan, John F and Burnet, Philip W.J
Trends in Cognitive Sciences, ISSN 1364-6613, 07/2018, Volume 22, Issue 7, pp. 611 - 636
Psychology and microbiology make unlikely friends, but the past decade has witnessed striking bidirectional associations between intrinsic gut microbes and the... 
microbiota | hypothalamic-pituitary-adrenal axis | gut–brain axis | interkingdom signaling | prebiotics | psychobiotics | commensal bacteria | microbiome | antibiotics | probiotics | HISTONE DEACETYLASE INHIBITOR | FERMENTED MILK | FECAL MICROBIOTA | LACTOBACILLUS-HELVETICUS | GUT MICROBIOTA | ANXIETY-LIKE BEHAVIOR | ELEVATED PLUS-MAZE | NEUROSCIENCES | PSYCHOLOGY, EXPERIMENTAL | SODIUM-BUTYRATE | BEHAVIORAL SCIENCES | CENTRAL-NERVOUS-SYSTEM | MAJOR DEPRESSIVE DISORDER | Cognition - physiology | Behavior - physiology | Gastrointestinal Microbiome - physiology | Animals | Brain - physiology | Humans
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14. Full Text Stability of the gorilla microbiome despite simian immunodeficiency virus infection
by Moeller, Andrew H and Peeters, Martine and Ayouba, Ahidjo and Ngole, Eitel Mpoudi and Esteban, Amadine and Hahn, Beatrice H and Ochman, Howard
Molecular Ecology, ISSN 0962-1083, 02/2015, Volume 24, Issue 3, pp. 690 - 697
Simian immunodeficiency viruses (SIVs) have been discovered in over 45 primate species; however, the pathogenic potential of most SIV strains remains unknown... 
microbial biology | metabarcoding | bacteria | conservation biology | coevolution | community ecology | TRANSLOCATION | ENTEROTYPES | SYSTEMIC IMMUNE ACTIVATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | COMMUNITIES | PATHOGENESIS | EVOLUTIONARY BIOLOGY | ORIGIN | GUT MICROBIOME | ECOLOGY | DIVERSITY | HIV-1 INFECTION | CHIMPANZEES | Feces - microbiology | Microbiota | Animals | Intestines - microbiology | Gorilla gorilla - virology | Bacteria - classification | Gorilla gorilla - microbiology | Simian Immunodeficiency Virus | Simian Acquired Immunodeficiency Syndrome - microbiology | Virus diseases | Control systems | Microbiota (Symbiotic organisms) | Simian immunodeficiency virus | Health aspects | Analysis | Gorillas | Animal diseases | Pathology | Viruses | Infections | Microbiology
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15. Full Text SIV-Induced Instability of the Chimpanzee Gut Microbiome
by Moeller, Andrew H and Shilts, Meghan and Li, Yingying and Rudicell, Rebecca S and Lonsdorf, Elizabeth V and Pusey, Anne E and Wilson, Michael L and Hahn, Beatrice H and Ochman, Howard
Cell Host & Microbe, ISSN 1931-3128, 09/2013, Volume 14, Issue 3, pp. 340 - 345
Simian immunodeficiency virus of chimpanzees (SIVcpz) is the ancestor of human immunodeficiency virus type 1 (HIV-1), the etiologic agent of acquired... 
HIV-INFECTION | ENTEROTYPES | VIROLOGY | SCHWEINFURTHII | IMMUNODEFICIENCY VIRUS-INFECTION | AIDS | MICROBIOLOGY | PARASITOLOGY | Biota | Tanzania | Gastrointestinal Tract - microbiology | Molecular Sequence Data | DNA, Bacterial - chemistry | Pan troglodytes | Dysbiosis | Simian Acquired Immunodeficiency Syndrome - complications | DNA, Ribosomal - chemistry | Sequence Analysis, DNA | Feces - microbiology | Bacteria - growth & development | Animals | DNA, Bacterial - genetics | Bacteria - classification | RNA, Ribosomal, 16S - genetics | DNA, Ribosomal - genetics | AIDS vaccines | Evolutionary biology | Simian immunodeficiency virus | Health aspects | Immunodeficiency
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