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INSULA-REVISTA DE LETRAS Y CIENCIAS HUMANAS, ISSN 0020-4536, 01/2015, Volume 70, Issue 817, pp. 22 - 23
Journal Article
Development (Cambridge), ISSN 0950-1991, 03/2014, Volume 141, Issue 6, pp. 1381 - 1391
How signaling gradients supply positional information in a field of moving cells is an unsolved question in patterning and morphogenesis. Here, we ask how a... 
Signal gradient | Wnt signaling | Embryonic elongation | Fgf signaling | Segmentation clock | Time-lapse microscopy | WAVE-FRONT ACTIVITY | SIGNALING PATHWAYS | MOUSE EMBRYOS | NOTCH | DEVELOPMENTAL BIOLOGY | BOUNDARY FORMATION | GENE-EXPRESSION | BODY FORMATION | PRESOMITIC MESODERM | VERTEBRATE SEGMENTATION | T-Box Domain Proteins - physiology | Fibroblast Growth Factors - genetics | Wnt Signaling Pathway - physiology | Zebrafish - embryology | Intercellular Signaling Peptides and Proteins - physiology | Somites - embryology | Wnt Proteins - genetics | Gene Expression Regulation, Developmental | Fibroblast Growth Factors - physiology | Somites - metabolism | Basic Helix-Loop-Helix Transcription Factors - physiology | Basic Helix-Loop-Helix Transcription Factors - genetics | Animals, Genetically Modified | Zebrafish Proteins - antagonists & inhibitors | Intercellular Signaling Peptides and Proteins - genetics | Heat-Shock Response - physiology | T-Box Domain Proteins - genetics | Zebrafish - genetics | Zebrafish Proteins - physiology | Body Patterning - physiology | Heat-Shock Response - genetics | Animals | Wnt Signaling Pathway - genetics | Models, Biological | Zebrafish - metabolism | Wnt Proteins - physiology | Zebrafish Proteins - genetics | Wnt Proteins - antagonists & inhibitors | Body Patterning - genetics | Index Medicus | Life Sciences | Genetics
Journal Article
Physical Review Letters, ISSN 0031-9007, 07/2007, Volume 99, Issue 1, pp. 010602 - 010602
We study general aspects of active motion with fluctuations in the speed and the direction of motion in two dimensions. We consider the case in which... 
PHYSICS, MULTIDISCIPLINARY | MOVEMENT | RANDOM-WALK | Biological Physics | Physics
Journal Article
Science, ISSN 0036-8075, 2014, Volume 345, Issue 6193, pp. 222 - 225
During embryonic development, temporal and spatial cues are coordinated to generate a segmented body axis. In sequentially segmenting animals, the rhythm of... 
DYNAMICS | SOMITOGENESIS | VERTEBRATE SEGMENTATION | SEGMENTATION CLOCK | MULTIDISCIPLINARY SCIENCES | Genetic research | Embryonic development | Genetic aspects | Research | Growth | Zebra fish | Doppler effect | Vertebrates | Embryos | Segmentation | Oscillations | Genetics | Segments | Rhythm | Formations | Time measurements
Journal Article
Physical Review Letters, ISSN 0031-9007, 04/2014, Volume 112, Issue 17, pp. 174101 - 174101
In systems of coupled oscillators, the effects of complex signaling can be captured by time delays and phase shifts. Here, we show how time delays and phase... 
PHYSICS, MULTIDISCIPLINARY | OSCILLATORS | MUTUAL ENTRAINMENT | SYSTEMS | KURAMOTO MODEL | TIME-DELAY | VERTEBRATE SEGMENTATION | CLOCK | LAMBERT-W-FUNCTION | Models, Theoretical | Signal Transduction | Phase Transition | Index Medicus | Phase shift | Dynamics | Synchronism | Joining | Time delay | Synchronization | Dynamical systems | Oscillators | Physics - Adaptation and Self-Organizing Systems
Journal Article
PLoS Biology, ISSN 1544-9173, 07/2012, Volume 10, Issue 7, pp. 11 - e1001364
Journal Article
Current Biology, ISSN 0960-9822, 2010, Volume 20, Issue 14, pp. 1254 - 1258
Background: Coupled biological oscillators can tick with the same period. How this collective period is established is a key question in understanding... 
DEVBIO
Journal Article
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, ISSN 1539-3755, 03/2013, Volume 87, Issue 3
We study the transient synchronization dynamics of locally coupled phase oscillators moving on a one-dimensional lattice. Analysis of spatial phase correlation... 
BIODIVERSITY | ROCK-PAPER-SCISSORS | SYNCHRONIZATION | PHYSICS, FLUIDS & PLASMAS | SEGMENTATION | POPULATIONS | NETWORKS | MODEL | PHYSICS, MATHEMATICAL | PROMOTES
Journal Article
New Journal of Physics, ISSN 1367-2630, 09/2015, Volume 17, Issue 9, pp. 093042 - 093042
The segmentation of the vertebrate body plan during embryonic development is a rhythmic and sequential process governed by genetic oscillations. These genetic... 
coupled oscillators, morphogenesis, pattern formation | Vertebrates | Segmentation | Continuums | Oscillations | Genetics | Segments | Zebrafish | Gene expression | 87.18.Hf | morphogenesis | coupled oscillators | 05.45.Xt | 82.39.Rt | Paper | 87.17.Pq | pattern formation
Journal Article
Physical Review Letters, ISSN 0031-9007, 05/2007, Volume 98, Issue 22, pp. 228101 - 228101
We develop a stochastic description of feedback oscillators in which functional molecules are produced by an assembly line consisting of many identical steps.... 
SYSTEM | RHYTHMS | PHYSICS, MULTIDISCIPLINARY | FLUCTUATIONS | NOISE | TIME | NETWORKS | MECHANISMS | EXPRESSION | DELAY | FEEDBACK | Gene Expression | Biophysical Phenomena | Stochastic Processes | Feedback | Models, Biological | Biological Clocks - genetics | Circadian Rhythm - genetics | Models, Genetic | Biophysics | Index Medicus
Journal Article
New Journal of Physics, ISSN 1367-2630, 09/2010, Volume 12, Issue 9, p. 093029
We study the synchronization of locally coupled noisy phase oscillators that move diffusively in a one-dimensional ring. Together with the disordered and the... 
BIODIVERSITY | ROCK-PAPER-SCISSORS | PHYSICS, MULTIDISCIPLINARY | MEAN-FIELD THEORY | SEGMENTATION CLOCK | NOISE | COUPLED OSCILLATORS | PROMOTES | Biological Physics | Physics
Journal Article
eLife, ISSN 2050-084X, 04/2018, Volume 7
Segmentation of the axial skeleton in amniotes depends on the segmentation clock, which patterns the paraxial mesoderm and the sclerotome. While the... 
BOUNDARIES | EVOLUTION | PATTERN | MINERALIZATION | OSTEOBLASTS | BIOLOGY | SOMITE CELLS | VERTEBRAL COLUMN | OSTEOGENESIS | EXPRESSION | OSCILLATOR | Circadian rhythms | Physiological aspects | Zebra fish
Journal Article
Physical Review Letters, ISSN 0031-9007, 05/2012, Volume 108, Issue 20, pp. 204101 - 204101
We study the effects of delayed coupling on timing and pattern formation in spatially extended systems of dynamic oscillators. Starting from a discrete lattice... 
PATTERN-FORMATION | PHYSICS, MULTIDISCIPLINARY | SEGMENTATION CLOCK | DYNAMICS | SYSTEMS | NETWORKS | LIMIT-CYCLE OSCILLATORS | SOMITOGENESIS | TIME-DELAY | VERTEBRATE SEGMENTATION
Journal Article