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1. Full Text Integrated metabolomics for abiotic stress responses in plants
by Nakabayashi, Ryo and Saito, Kazuki
Current opinion in plant biology, ISSN 1369-5266, 04/2015, Volume 24, pp. 10 - 16
Life Sciences & Biomedicine | Plant Sciences | Science & Technology | Metabolomics | Flavonoids - genetics | Plants - metabolism | Plants - genetics | Antioxidants - metabolism | Flavonoids - metabolism | Gene Expression Regulation, Plant | Stress, Physiological | Plant Physiological Phenomena | Plants | Metabolites | Analysis | Isoflavones | Index Medicus
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2. Full Text HiC-Hiker: a probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C
by Nakabayashi, Ryo and Morishita, Shinichi
Bioinformatics, ISSN 1367-4803, 07/2020, Volume 36, Issue 13, pp. 3966 - 3974
Statistics & Probability | Biochemistry & Molecular Biology | Physical Sciences | Computer Science, Interdisciplinary Applications | Life Sciences & Biomedicine | Technology | Biochemical Research Methods | Computer Science | Mathematics | Biotechnology & Applied Microbiology | Science & Technology | Mathematical & Computational Biology | Algorithms | Chromosomes - genetics | Genomics | Humans | Contig Mapping | Models, Statistical | Genome | Sequence Analysis, DNA | Index Medicus | Original Papers
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3. Full Text Higher dimensional metabolomics using stable isotope labeling for identifying the missing specialized metabolism in plants
by Nakabayashi, Ryo and Saito, Kazuki
Current opinion in plant biology, ISSN 1369-5266, 06/2020, Volume 55, pp. 84 - 92
Physiological aspects | Evolution | Plants | Metabolites | Index Medicus
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4. Full Text Ultrahigh resolution metabolomics for S-containing metabolites
by Nakabayashi, Ryo and Saito, Kazuki
Current opinion in biotechnology, ISSN 0958-1669, 2016, Volume 43, pp. 8 - 16
Internal Medicine | Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Biochemical Research Methods | Science & Technology | Metabolome | Sulfur - analysis | Plants - metabolism | Sulfur Isotopes - analysis | Mass Spectrometry - methods | Metabolomics - methods | Metabolites | Sulfur compounds | Mass spectrometry | Analysis | Index Medicus
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5. Full Text Metabolomics for unknown plant metabolites
by Nakabayashi, Ryo and Saito, Kazuki
Analytical and bioanalytical chemistry, ISSN 1618-2642, 6/2013, Volume 405, Issue 15, pp. 5005 - 5011
Biochemistry, general | Metabolomics | LC–SPE–NMR–MS | Chemistry | Analytical Chemistry | Food Science | Unknown secondary metabolites | LC–MS | Characterization and Evaluation of Materials | Laboratory Medicine | Environmental Monitoring/Analysis | Computer-assisted structure elucidation | LC-MS | LC-SPE-NMR-MS | Biochemistry & Molecular Biology | Physical Sciences | Life Sciences & Biomedicine | Biochemical Research Methods | Chemistry, Analytical | Science & Technology | Arabidopsis - genetics | Gene Expression Regulation, Plant - physiology | Metabolomics - trends | Chemistry Techniques, Analytical - instrumentation | Chemistry Techniques, Analytical - methods | Metabolomics - methods | Arabidopsis - metabolism | Physiological aspects | Biosynthesis | Liquid chromatography | Research | Mass spectrometry | Plant metabolites | Methods | Index Medicus | Consolidation | Metabolites | Mathematical analysis | Genes | Plants (organisms) | Metabolism | Standards | Structural analysis
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6. Full Text Hydrogen Rearrangement Rules: Computational MS/MS Fragmentation and Structure Elucidation Using MS-FINDER Software
by Tsugawa, Hiroshi and Kind, Tobias and Nakabayashi, Ryo and Yukihira, Daichi and Tanaka, Wataru and Cajka, Tomas and Saito, Kazuki and Fiehn, Oliver and Arita, Masanori
Analytical chemistry (Washington), ISSN 0003-2700, 08/2016, Volume 88, Issue 16, pp. 7946 - 7958
Physical Sciences | Chemistry | Chemistry, Analytical | Science & Technology | Lysine - analogs & derivatives | Glutathione - analogs & derivatives | Humans | Hydrogen - chemistry | Tandem Mass Spectrometry | Glutamic Acid - analogs & derivatives | Phenylurea Compounds - chemistry | Phosphorylcholine - chemistry | Glutathione - chemistry | Molecular Structure | Software | Lysine - chemistry | Cohort Studies | Glutamic Acid - chemistry | Computational chemistry | Metabolomics | Usage | Hydrogen | Analysis | Chemical properties | Mass spectrometry | Probability | Ions | Accuracy | Index Medicus | Databases | Molecular structure | Spectra | Isomers | Computer programs | Fragmentation
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7. Full Text The Origin and Evolution of Plant Flavonoid Metabolism
by Yonekura-Sakakibara, Keiko and Higashi, Yasuhiro and Nakabayashi, Ryo
Frontiers in plant science, ISSN 1664-462X, 08/2019, Volume 10, pp. 943 - 943
Life Sciences & Biomedicine | Plant Sciences | Science & Technology | Botanical research | Flavonoids | Biosynthesis | Research | Flavones | Bioflavonoids | Metabolites | Evolutionary biology | Analysis | Genetic research | Evolution | Plants | secondary metabolites | polyketide synthase | flavonoid | cytochrome P450 | 2-oxoglutarate-dependent dioxygenase | short-chain dehydrogenase/reductase
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8. Full Text Human genetic variation database, a reference database of genetic variations in the Japanese population
by Higasa, Koichiro and Miyake, Noriko and Yoshimura, Jun and Okamura, Kohji and Niihori, Tetsuya and Saitsu, Hirotomo and Doi, Koichiro and Shimizu, Masakazu and Nakabayashi, Kazuhiko and Aoki, Yoko and Tsurusaki, Yoshinori and Morishita, Shinichi and Kawaguchi, Takahisa and Migita, Osuke and Nakayama, Keiko and Nakashima, Mitsuko and Mitsui, Jun and Narahara, Maiko and Hayashi, Keiko and Funayama, Ryo and Yamaguchi, Daisuke and Ishiura, Hiroyuki and Ko, Wen-Ya and Hata, Kenichiro and Nagashima, Takeshi and Yamada, Ryo and Matsubara, Yoichi and Umezawa, Akihiro and Tsuji, Shoji and Matsumoto, Naomichi and Matsuda, Fumihiko
Journal of human genetics, ISSN 1434-5161, 06/2016, Volume 61, Issue 6, pp. 547 - 553
Life Sciences & Biomedicine | Genetics & Heredity | Science & Technology | Genetics, Population | Gene Frequency | Humans | Japan | Selection, Genetic | Databases, Genetic | Genotype | Exome | Genetic Variation | Alleles | High-Throughput Nucleotide Sequencing | Genome, Human | Genomics - methods | Web Browser | Quality Control | Index Medicus | Original
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9. Full Text Identification of chemical form of stable carbon released from type 304L and 316L stainless-steel powders in alkaline and acidic solutions under low-oxygen conditions
by Nakabayashi, Ryo and Fujita, Tomonari
Radiocarbon, ISSN 0033-8222, 12/2018, Volume 60, Issue 6, pp. 1691 - 1710
Irradiated Steels | chemical form | water-atomized stainless-steel powder | corrosion | Laboratories | Colloids | Hydrocarbons | Colloid chemistry | Iron | Carboxylic acids | Experiments | Carbon | Sodium hydroxide | Organic chemistry | Hypotheses | Corrosion | Silicon oxides | Stainless steel | Austenitic stainless steels | Oxide coatings | Silicon | Nuclear power plants | Safety | Atomizing | Carbon 14
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10. Full Text Top-down Metabolomic Approaches for Nitrogen-Containing Metabolites
by Nakabayashi, Ryo and Hashimoto, Kei and Toyooka, Kiminori and Saito, Kazuki
Analytical chemistry (Washington), ISSN 0003-2700, 03/2017, Volume 89, Issue 5, pp. 2698 - 2703
Physical Sciences | Chemistry | Chemistry, Analytical | Science & Technology | Biochemistry | Flowers & plants | Metabolites | Comparative analysis | Mass spectrometry | Chromatography | Index Medicus | Petals | Leaves | Spectroscopy | High resolution | Spectrometry | Roots | Stems
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