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1. Full Text High-Quality Binary Protein Interaction Map of the Yeast Interactome Network
by Haiyuan Yu and Pascal Braun and Muhammed A. Yildirim and Irma Lemmens and Kavitha Venkatesan and Julie Sahalie and Tomoko Hirozane-Kishikawa and Fana Gebreab and Na Li and Nicolas Simonis and Tong Hao and Jean-François Rual and Amélie Dricot and Alexei Vazquez and Ryan R. Murray and Christophe Simon and Leah Tardivo and Stanley Tam and Nenad Svrzikapa and Changyu Fan and Anne-Sophie de Smet and Adriana Motyl and Michael E. Hudson and Juyong Park and Xiaofeng Xin and Michael E. Cusick and Troy Moore and Charlie Boone and Michael Snyder and Frederick P. Roth and Albert-László Barabási and Jan Tavernier and David E. Hill and Marc Vidal
Science (American Association for the Advancement of Science), ISSN 0036-8075, 10/2008, Volume 322, Issue 5898, pp. 104 - 110
Datasets | Yeasts | Screening tests | Drug interactions | Molecular interactions | Principal components analysis | Connectivity | Reports | Open reading frames | Grants | Protein interaction mapping | Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | Diverse techniques | Molecular and cellular biology | Signal Transduction | Saccharomyces cerevisiae - genetics | Computational Biology | Saccharomyces cerevisiae Proteins - genetics | Gene Regulatory Networks | Protein Interaction Mapping - standards | Saccharomyces cerevisiae - metabolism | Transcription Factors - metabolism | Protein Interaction Mapping - methods | Two-Hybrid System Techniques | Metabolic Networks and Pathways | Mass Spectrometry | Proteomics | Saccharomyces cerevisiae Proteins - metabolism | Protein Array Analysis | Protein Binding | Saccharomyces cerevisiae Proteins - isolation & purification | Proteome - metabolism | Physiological aspects | Genetic aspects | Research | Yeast fungi | Protein-protein interactions | Data analysis | Yeast | Cellular biology | Molecular biology | Spectrum analysis | Index Medicus
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2. Full Text An empirical framework for binary interactome mapping
by Gebreab, Fana and Vinayagam, Arunachalam and Murray, Ryan R and Rau, Kirstin and Timm, Jan and Boone, Charles and Braun, Pascal and Lalowski, Maciej and Szeto, David and Yu, Haiyuan and Zenkner, Martina and Tavernier, Jan and Heinzmann, Kathrin and Wanker, Erich E and Vazquez, Alexei and Xin, Xiaofeng and Simonis, Nicolas and Hao, Tong and Borick, Heather and Klitgord, Niels and Lemmens, Irma and Lin, Chenwei and Barabási, Albert-László and Venkatesan, Kavitha and Stelzl, Ulrich and Simon, Christophe and Cusick, Michael E and Hill, David E and Hirozane-Kishikawa, Tomoko and Dann, Elizabeth and Cevik, Sebiha and Sahalie, Julie M and Roth, Frederick P and Dricot, Amélie and Smolyar, Alex and Vidal, Marc and Yildirim, Muhammed A and Rual, Jean-François and de Smet, Anne-Sophie and Goh, Kwang-Il
Nature Methods, ISSN 1548-7091, 01/2009, Volume 6, Issue 1, pp. 83 - 90
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Biochemical Research Methods | Science & Technology | Proteins - genetics | Protein Interaction Mapping - methods | Proteins - metabolism | Databases, Protein | Humans | Sensitivity and Specificity | Protein Binding | Proteins - analysis | Usage | Mass spectrometry | Analysis | Protein-protein interactions | Data analysis | Binary system | Research methodology | Proteomics | Quality control | Index Medicus
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3. Full Text Proto-genes and de novo gene birth
by Carvunis, Anne-Ruxandra and Rolland, Thomas and Wapinski, Ilan and Calderwood, Michael A and Yildirim, Muhammed A and Simonis, Nicolas and Charloteaux, Benoit and Hidalgo, César A and Barbette, Justin and Santhanam, Balaji and Brar, Gloria A and Weissman, Jonathan S and Regev, Aviv and Thierry-Mieg, Nicolas and Cusick, Michael E and Vidal, Marc
Nature (London), ISSN 0028-0836, 07/2012, Volume 487, Issue 7407, pp. 370 - 374
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Translation. Translation factors. Protein processing | Biological and medical sciences | Molecular and cellular biology | Molecular genetics | Protein Biosynthesis | Saccharomyces cerevisiae - genetics | Open Reading Frames | Molecular Sequence Data | Saccharomyces cerevisiae - classification | Phylogeny | Saccharomyces - genetics | Genetic Variation | Sequence Alignment | Base Sequence | Conserved Sequence | Genes, Fungal - genetics | Saccharomyces - classification | Evolution, Molecular | Physiological aspects | Molecular evolution | Research | Genes | Natural history | Evolution | Genetics | Genomes | Mutation | Binding sites | Index Medicus | Quantitative Methods | Saccharomyces | Life Sciences | Computer Science | Genes, Fungal | Saccharomyces cerevisiae | Bioinformatics
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4. Full Text Invariants for time-series constraints
by Arafailova, Ekaterina and Beldiceanu, Nicolas and Simonis, Helmut
Constraints : an international journal, ISSN 1383-7133, 12/2020, Volume 25, Issue 3-4, pp. 71 - 120
Computer Science, Artificial Intelligence | Computer Science, Theory & Methods | Technology | Computer Science | Science & Technology | Robots | Artificial Intelligence
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5. Full Text Edgetic perturbation models of human inherited disorders
by Hill, David E and Klitgord, Niels and Yan, Han and Cusick, Michael E and Heuze, Fabien and Lin, Chenwei and Vidal, Marc and Venkatesan, Kavitha and Zhong, Quan and Mou, Danny and Simonis, Nicolas and Swearingen, Venus and Yildirim, Muhammed A and Szeto, David and Fan, Changyu and Li, Qian-Ru and Yu, Haiyuan and Dricot, Amélie and Brasseur, Robert and Hao, Tong and Charloteaux, Benoit and Dupuy, Denis and Milstein, Stuart and Tam, Stanley
Molecular systems biology, ISSN 1744-4292, 11/2009, Volume 5, Issue 1, pp. 321 - n/a
genotype‐to‐phenotype relationships | network perturbation | binary protein interaction | human Mendelian disorders | Genotype-to-phenotype relationships | Binary protein interaction | Network perturbation | Human Mendelian disorders | Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Models, Genetic | Disease - genetics | Mutation - genetics | Humans | Alleles | Genetic Diseases, Inborn - genetics | Transcription factors | Ontology | Disease | Genes | Disorders | Population genetics | Defects | Human populations | Proteins | Genotype & phenotype | Databases | Metabolites | Perturbation methods | Genotypes | Phenotypes | Genetic disorders | Macromolecules | Complex systems | Nodes | Hereditary diseases | Hypotheses | Computer applications | Mutation | Binding sites | Index Medicus
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6. Full Text Literature-curated protein interaction datasets
by Yazaki, Junshi and Hill, David E and Cusick, Michael E and Carvunis, Anne-Ruxandra and Rual, Jean-François and Vandenhaute, Jean and Braun, Pascal and Dreze, Matija and Vidal, Marc and Roth, Frederick P and Simonis, Nicolas and Ecker, Joseph R and Smolyar, Alex and Venkatesan, Kavitha and Galli, Mary and Borick, Heather and Yu, Haiyuan
Nature methods, ISSN 1548-7091, 01/2009, Volume 6, Issue 1, pp. 39 - 46
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Biochemical Research Methods | Science & Technology | Reproducibility of Results | Animals | Proteins - metabolism | Databases, Protein | Humans | Protein Binding | Proteins - analysis | Proteins - chemistry | Research Design | Databases, Factual | Protein microarrays | Usage | Mass spectrometry | Analysis | Protein-protein interactions | Errors | Databases | Research methodology | Proteomics | Quality control | Index Medicus
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7. Full Text Deriving generic bounds for time-series constraints based on regular expressions characteristics
by Arafailova, Ekaterina and Arafailova, Ekaterina and Beldiceanu, Nicolas and Beldiceanu, Nicolas and Simonis, Helmut and Simonis, Helmut
Constraints : an international journal, ISSN 1383-7133, 1/2018, Volume 23, Issue 1, pp. 44 - 86
Global constraints | Quantitative regular expressions | Operations Research/Decision Theory | Regular programming | Computer Science | Time-series constraints | Artificial Intelligence (incl. Robotics) | Computing Methodologies | Sharp bounds | Optimization | Computer Science, Artificial Intelligence | Computer Science, Theory & Methods | Technology | Science & Technology | Software reviews | Combinatorial analysis
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8. Full Text Autosomal recessive cerebellar ataxia of adult onset due to STUB1 Mutations
by Depondt, Chantal and Donatello, Simona and Simonis, Nicolas and Rai, Myriam and van Heurck, Roxane and Abramowicz, Marc and DʼHooghe, Marc and Pandolfo, Massimo
Neurology, ISSN 0028-3878, 05/2014, Volume 82, Issue 19, pp. 1749 - 1750
Clinical Neurology | Neurosciences & Neurology | Life Sciences & Biomedicine | Science & Technology | Neurology | Biological and medical sciences | Medical sciences | Degenerative and inherited degenerative diseases of the nervous system. Leukodystrophies. Prion diseases | Genetic Predisposition to Disease - genetics | Cerebellar Ataxia - genetics | Humans | Polymorphism, Single Nucleotide - genetics | Adult | Male | Mutation - genetics | Ubiquitin-Protein Ligases - genetics | Index Medicus | Abridged Index Medicus
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9. Full Text Anti-human CD117 CAR T-cells efficiently eliminate healthy and malignant CD117-expressing hematopoietic cells
by Myburgh, Renier and Kiefer, Jonathan D and Russkamp, Norman F and Magnani, Chiara F and Nuñez, Nicolás and Simonis, Alexander and Pfister, Surema and Wilk, C. Matthias and McHugh, Donal and Friemel, Juliane and Müller, Antonia M and Becher, Burkhard and Münz, Christian and van den Broek, Maries and Neri, Dario and Manz, Markus G
Leukemia, ISSN 0887-6924, 10/2020, Volume 34, Issue 10, pp. 2688 - 2703
Oncology | Life Sciences & Biomedicine | Hematology | Science & Technology | Antigens | T cells | Antithymocyte globulin | Immunotherapy | Hematopoietic stem cells | Myeloid leukemia | Leukemia | Rituximab | Lymphocytes T | Transplantation | Progenitor cells | Cell surface | Hemopoiesis | Stem cell factor | Chimeric antigen receptors | Receptors | Depletion | Hematopoiesis | Stem cells | Acute myeloid leukemia | Index Medicus
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