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Journal of Fluid Mechanics, ISSN 0022-1120, 1/2001, Volume 426, pp. 327 - 345
The analytic properties of adjoint solutions are examined for the quasi-one-dimensional Euler equations. For shocked flow, the derivation of the adjoint... 
SHAPE OPTIMIZATION | MECHANICS | PHYSICS, FLUIDS & PLASMAS | PARALLEL COMPUTERS | AERODYNAMIC DESIGN | FLOWS | FORMULATION | Transonic flow | Throats | Fluid dynamics | Singularities | Mathematical analysis | Adjoints | Derivation | Euler equations
Journal Article
Journal of Computational Chemistry, ISSN 0192-8651, 10/2003, Volume 24, Issue 13, pp. 1664 - 1677
Nucleic acid secondary structure models usually exclude pseudoknots due to the difficulty of treating these nonnested structures efficiently in structure... 
secondary structure | pseudoknots | RNA | DNA | partition function | Pseudoknots | Partition function | Secondary structure | DESIGN | SEQUENCES | RNA STRUCTURE PREDICTION | INFORMATION | PSEUDOBASE | PARAMETERS | CHEMISTRY, MULTIDISCIPLINARY | Thermodynamics | DNA - chemistry | Algorithms | Computational Biology | Models, Molecular | Nucleic Acid Conformation | RNA - chemistry | Index Medicus
Journal Article
Development (Cambridge), ISSN 0950-1991, 08/2016, Volume 143, Issue 15, pp. 2862 - 2867
Journal Article
Biophysical Journal, ISSN 0006-3495, 01/2014, Volume 106, Issue 2, pp. 617a - 617a
Journal Article
Journal of the American Chemical Society, ISSN 0002-7863, 03/2017, Volume 139, Issue 8, pp. 3134 - 3144
We describe a framework for designing the sequences of multiple nucleic acid strands intended to hybridize in solution via a prescribed reaction pathway.... 
Chemical reactions | Usage | Synthetic biology | Nucleic acids | Research | Index Medicus
Journal Article
Development, ISSN 0950-1991, 06/2018, Volume 145, Issue 12, p. dev165753
Journal Article
Flow, Turbulence and Combustion, ISSN 1386-6184, 12/2000, Volume 65, Issue 3, pp. 393 - 415
Optimal design methods involving the solution of an adjoint system of equations are an active area of research in computational fluid dynamics, particularly... 
Automotive and Aerospace Engineering, Traffic | Mechanics | computational fluid dynamics | adjoint | Physics | design | Adjoint p.d.e | Design | Computational fluid dynamics | SHAPE OPTIMIZATION | adjoint p.d.e | MECHANICS | THERMODYNAMICS | SENSITIVITY-ANALYSIS | PARALLEL COMPUTERS | AERODYNAMIC DESIGN | FORMULATION
Journal Article
Journal of the American Chemical Society, ISSN 0002-7863, 11/2013, Volume 135, Issue 46, pp. 17322 - 17330
RNA interference (RNAi) mediated by small interfering RNAs (siRNAs) enables knockdown of a gene of choice, executing the logical operation: silence gene Y. The... 
DESIGN | DNA | GENE-EXPRESSION | SYSTEMS | INTERFERENCE | SMALL MOLECULE INTERACTION | MAMMALIAN-CELLS | CHEMISTRY, MULTIDISCIPLINARY | RNA Interference | RNA, Messenger - genetics | Gene Silencing | Measurement | RNA sequencing | Messenger RNA | Research | Structure | Activation energy | Protein binding | Index Medicus | Self assembly | Silence | Ribonucleic acids | Genes | Formations | Logic | Gene expression | Target detection
Journal Article
Journal of Computational Physics, ISSN 0021-9991, 2004, Volume 200, Issue 2, pp. 769 - 794
Journal Article
Proceedings of the National Academy of Sciences, ISSN 0027-8424, 01/2013, Volume 110, Issue 1, pp. 384 - 384
Journal Article
Biophysical Journal, ISSN 0006-3495, 01/2013, Volume 104, Issue 2, pp. 500a - 500a
Journal Article
ACS Synthetic Biology, ISSN 2161-5063, 12/2018, Volume 7, Issue 12, pp. 2796 - 2802
Dynamic RNA nanotechnology with small conditional RNAs (scRNAs) offers a promising conceptual approach to introducing synthetic regulatory links into... 
dynamic RNA nanotechnology | Dicer processing | human cell lysate | RNA degradation | conditional siRNA production | conditional RNAi | small conditional RNA (scRNA) | molecular programming | CRISPR | SEQUENCE DESIGN | BIOCHEMICAL RESEARCH METHODS | DICER | PREDICTION
Journal Article
Development (Cambridge), ISSN 0950-1991, 10/2016, Volume 143, Issue 19, pp. 3632 - 3637
Journal Article
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