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1. Full Text SMARCA4 inactivation defines a group of undifferentiated thoracic malignancies transcriptionally related to BAF-deficient sarcomas
by Le Loarer, Francois and Watson, Sarah and Pierron, Gaelle and De Montpreville, Vincent Thomas and Ballet, Stelly and Firmin, Nelly and Auguste, Aurelie and Pissaloux, Daniel and Boyault, Sandrine and Paindavoine, Sandrine and Dechelotte, Pierre Joseph and Besse, Benjamin and Vignaud, Jean Michel and Brevet, Marie and Fadel, Elie and Richer, Wilfrid and Treilleux, Isabelle and Masliah-Planchon, Julien and Devouassoux-Shisheboran, Mojgan and Zalcman, Gerard and Allory, Yves and Bourdeaut, Franck and Thivolet-Bejui, Francoise and Ranchere-Vince, Dominique and Girard, Nicolas and Lantuejoul, Sylvie and Galateau-Sallé, Francoise and Coindre, Jean Michel and Leary, Alexandra and Delattre, Olivier and Blay, Jean Yves and Tirode, Franck
Nature Genetics, ISSN 1061-4036, 09/2015, Volume 47, Issue 10, pp. 1200 - 1205
While investigating cohorts of unclassified sarcomas by RNA sequencing, we identified 19 cases with inactivation of SMARCA4, which encodes an ATPase subunit of... 
RHABDOID TUMORS | LUNG-CANCER | SMALL-CELL-CARCINOMA | CHROMATIN REMODELING FACTOR | BRG1 | MAMMALIAN SWI/SNF COMPLEXES | GENETICS & HEREDITY | TUMOR-SUPPRESSOR GENE | EPITHELIOID SARCOMA | HYPERCALCEMIC TYPE | EXPRESSION | Thoracic Neoplasms - genetics | Humans | Adult | Transcription, Genetic | Sarcoma - genetics | Transcription Factors - genetics | DNA-Binding Proteins - genetics | Nuclear Proteins - genetics | DNA Helicases - genetics | Molecular targeted therapy | Oncology, Experimental | Thoracic cancer | Development and progression | Genetic aspects | Research | Genetic transcription | Health aspects | Methods | Cancer | Life Sciences
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2. Full Text CYSLTR2-mutant Cutaneous Melanocytic Neoplasms Frequently Simulate “Pigmented Epithelioid Melanocytoma,” Expanding the Morphologic Spectrum of Blue Tumors: A Clinicopathologic Study of 7 Cases
by Goto, Keisuke and Pissaloux, Daniel and Paindavoine, Sandrine and Tirode, Franck and de la Fouchardière, Arnaud
The American Journal of Surgical Pathology, ISSN 0147-5185, 10/2019, Volume 43, Issue 10, pp. 1368 - 1376
Recurrent activating Gαq mutations in the spectrum of blue nevi have been well studied. However, the clinicopathologic characteristics of the recently... 
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3. Full Text About BRAF Mutations and p16 Expression in Melanomas Associated With Blue Nevi or Mimicking Cellular Blue Nevi: Author’s Reply
by de la Fouchardiere, Arnaud and Haddad, Veronique and Paindavoine, Sandrine and Pissaloux, Daniel
The American Journal of Surgical Pathology, ISSN 0147-5185, 06/2016, Volume 40, Issue 6, pp. 858 - 858
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4. Full Text Genetic alterations and tumor immune attack in Yo paraneoplastic cerebellar degeneration
by Small, Mathilde and Treilleux, Isabelle and Couillault, Coline and Pissaloux, Daniel and Picard, Géraldine and Paindavoine, Sandrine and Attignon, Valery and Wang, Qing and Rogemond, Véronique and Lay, Stéphanie and Ray-Coquard, Isabelle and Pfisterer, Jacobus and Joly, Florence and Du Bois, Andreas and Psimaras, Dimitri and Bendriss-Vermare, Nathalie and Caux, Christophe and Dubois, Bertrand and Honnorat, Jérôme and Desestret, Virginie
Acta Neuropathologica, ISSN 0001-6322, 4/2018, Volume 135, Issue 4, pp. 569 - 579
Paraneoplastic cerebellar degenerations with anti-Yo antibodies (Yo-PCD) are rare syndromes caused by an auto-immune response against neuronal antigens (Ags)... 
Pathology | Neurosciences | Paraneoplastic cerebellar degeneration | Medicine & Public Health | Autoantigen-encoding gene mutations | Ovarian cancer | Anti-tumor immunity | ANTIBODIES | DENDRITIC CELLS | INFILTRATING LYMPHOCYTES | PATHOLOGY | NEUROSCIENCES | BREAST | CLINICAL NEUROLOGY | CELL LUNG-CANCER | RESPONSES | FAVORABLE PROGNOSIS | EXPRESSION | T-CELLS | CDR2 | Autoimmunity | Antigens | Immune response | B cells | Cancer | Cerebellum | Ovarian carcinoma | Tumor cells | Effector cells | Immunological tolerance | Metastases | Missense mutation | Lymphocytes B | Antigen (tumor-associated) | Degeneration | Mutation | Apoptosis | Tumors
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5. Full Text CYSLTR2-mutant Cutaneous Melanocytic Neoplasms Frequently Simulate "Pigmented Epithelioid Melanocytoma," Expanding the Morphologic Spectrum of Blue Tumors A Clinicopathologic Study of 7 Cases
by Goto, K and Pissaloux, D and Paindavoine, S and Tirode, F and de la Fouchardiere, A
AMERICAN JOURNAL OF SURGICAL PATHOLOGY, ISSN 0147-5185, 10/2019, Volume 43, Issue 10, pp. 1368 - 1376
Recurrent activating G alpha q mutations in the spectrum of blue nevi have been well studied. However, the clinicopathologic characteristics of the recently... 
SURGERY | CYSLTR2 | blue nevus | GNA11 | melanocytoma | melanoma | MUTATIONS | PATHOLOGY | pigmented epithelioid melanocytoma | NEVI | Gene mutations | Melanoma | Physiological aspects | Genetic aspects | Diagnosis | Health aspects | Skin tumors
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6. Full Text Alternative PDGFD rearrangements in dermatofibrosarcomas protuberans without PDGFB fusions
by Dadone-Montaudié, Bérengère and Alberti, Laurent and Duc, Adeline and Delespaul, Lucile and Lesluyes, Tom and Pérot, Gaëlle and Lançon, Agnès and Paindavoine, Sandrine and Di Mauro, Ilaria and Blay, Jean-Yves and de la Fouchardière, Arnaud and Chibon, Frédéric and Karanian, Marie and MacGrogan, Gaëtan and Kubiniek, Valérie and Keslair, Frédérique and Cardot-Leccia, Nathalie and Michot, Audrey and Perrin, Virginie and Zekri, Yanis and Coindre, Jean-Michel and Tirode, Franck and Pedeutour, Florence and Ranchère-Vince, Dominique and Le Loarer, François and Pissaloux, Daniel
Modern Pathology, ISSN 0893-3952, 11/2018, Volume 31, Issue 11, pp. 1683 - 1693
Dermatofibrosarcoma protuberans is underlined by recurrent collagen type I alpha 1 chain-platelet-derived growth factor B chain (COL1A1-PDGFB) fusions but... 
DIAGNOSIS | GROWTH-FACTOR-D | COLLAGEN GENE COL1A1 | IN-SITU HYBRIDIZATION | TUMOR | POLYMERASE CHAIN-REACTION | MONOPHASIC SYNOVIAL SARCOMA | PATHOLOGY | EXPRESSION | CANCER | CARCINOMA | Transformation | Collagen (type I) | Platelet-derived growth factor | Fluorescence in situ hybridization | Platelet-derived growth factor B | Dermatofibrosarcoma protuberans | Autocrine signalling | Hybridization | Ribonucleic acid--RNA
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7. Full Text Actionable molecular alterations in advanced gynaecologic malignancies: updated results from the ProfiLER programme
by Varnier, Romain and Le Saux, Olivia and Chabaud, Sylvie and Garin, Gwenaëlle and Sohier, Emilie and Wang, Qing and Paindavoine, Sandrine and Pérol, David and Baudet, Christian and Attignon, Valéry and Pissaloux, Daniel and Heudel, Pierre and You, Benoit and Leyronnas, Cécile and Collard, Olivier and Trédan, Olivier and Bonnin, Nathalie and Long, Jérôme and Jacquin, Jean-Philippe and Cassier, Philippe A and Derbel, Olfa and Freyer, Gilles and Viari, Alain and Blay, Jean-Yves and Ray-Coquard, Isabelle
European Journal of Cancer, ISSN 0959-8049, 09/2019, Volume 118, pp. 156 - 165
The objectives of this study were to identify actionable genomic alterations in the gynaecological subpopulation of the ProfiLER programme and to report... 
Gynaecologic cancer | Next-generation sequencing | Precision medicine | aCGH | Molecular targeted agents | SURVIVAL | MULTICENTER | BEVACIZUMAB | OPEN-LABEL | OVARIAN-CANCER | TUMORS | MAINTENANCE THERAPY | CHEMOTHERAPY | TRIAL | ONCOLOGY | Development and progression | Analysis | Genomics | Cancer | Profiling | Gynecology | Medical services | Genomes | Hybridization | Survival | ErbB-2 protein | Patients | Gene sequencing | Refractory materials | Alterations | Mutation | Deoxyribonucleic acid--DNA | DNA sequencing | Tumors
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8. Full Text Parallel structural evolution of auxin response factors in the angiosperms
by Finet, Cédric and Fourquin, Chloé and Vinauger, Marion and Berne‐Dedieu, Annick and Chambrier, Pierre and Paindavoine, Sandrine and Scutt, Charles P
The Plant Journal, ISSN 0960-7412, 09/2010, Volume 63, Issue 6, pp. 952 - 959
Summary Here we analyze the structural evolution of the paralogous transcription factors ETTIN (ETT/ARF3) and AUXIN RESPONSE FACTOR 4 (ARF4), which control the... 
alternative splicing | angiosperm | auxin response factor 4 | ephedra distachya | amborella trichopoda | ETTIN | cabomba | aquatica | auxin response factor | molecular evolution | PHYLOGENY | TRANSCRIPTION | BOX PROTEIN TIR1 | TRANSLATION REINITIATION | CRABS-CLAW | PLANT SCIENCES | ORIGIN | SEQUENCE ALIGNMENT | GENES | DUPLICATION | ARABIDOPSIS | Ephedra - metabolism | Plants, Genetically Modified - genetics | Nuclear Proteins - metabolism | Magnoliopsida - genetics | Phylogeny | Transcription Factors - genetics | Magnoliopsida - metabolism | Transcription Factors - classification | Arabidopsis - metabolism | Arabidopsis - genetics | Transcription Factors - metabolism | Plant Proteins - genetics | Plant Proteins - classification | Plants, Genetically Modified - classification | Plants, Genetically Modified - metabolism | Ephedra - genetics | Nuclear Proteins - classification | Plant Proteins - metabolism | Nuclear Proteins - genetics | Magnoliopsida - classification | Evolution, Molecular | Genetic research | Analysis | DNA binding proteins | Genetics | Flowers & plants | Mutation | Evolutionary biology | Botany
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9. Full Text MDM4 amplification in a case of de‐differentiated liposarcoma and in‐silico data supporting an oncogenic event alternative to MDM2 amplification in a subset of cases
by Pissaloux, Daniel and Loarer, François Le and Decouvelaere, Anne‐Valérie and Paindavoine, Sandrine and Houlier, Aurélie and Vernay, Lionel and Bland, Vincent and Coindre, Jean‐Michel and Blay, Jean‐Yves and Ranchère‐Vince, Dominique
Histopathology, ISSN 0309-0167, 12/2017, Volume 71, Issue 6, pp. 1019 - 1023
OVEREXPRESSION | PATHOLOGY | P53 | CELL BIOLOGY | Amplification | MDM2 protein | Liposarcoma
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10. Full Text A Data-Driven Integrative Model of Sepal Primordium Polarity in Arabidopsis
by Camilo La Rota and Jérôme Chopard and Pradeep Das and Sandrine Paindavoine and Frédérique Rozier and Etienne Farcot and Christophe Godin and Jan Traas and Françoise Monéger
The Plant Cell, ISSN 1040-4651, 12/2011, Volume 23, Issue 12, pp. 4318 - 4333
Flower patterning is determined by a complex molecular network but how this network functions remains to be elucidated. Here, we develop an integrative... 
Calyx | Databases | rev genes | Molecular interactions | Genes | Auxins | Mathematical independent variables | Modeling | Parametric models | Plant cells | BIOCHEMISTRY & MOLECULAR BIOLOGY | REGULATORY NETWORK | CYTOKININ | PLANT SCIENCES | CELL BIOLOGY | FLOWER DEVELOPMENT | MORPHOGENESIS | AUXIN | REPRESSION | THALIANA | GENE-EXPRESSION | ASYMMETRIC-LEAVES2 | DIFFERENTIATION | Cell Polarity | RNA, Small Interfering - genetics | Arabidopsis - physiology | Flowers - metabolism | Genes, Plant | MicroRNAs - metabolism | Gene Regulatory Networks | RNA, Plant - metabolism | Protein Interaction Maps | Arabidopsis Proteins - metabolism | In Situ Hybridization | Gene Expression Regulation, Plant | Flowers - anatomy & histology | Binding Sites | Promoter Regions, Genetic | Arabidopsis Proteins - genetics | Computational Biology | RNA, Plant - genetics | Transcription Factors - genetics | Arabidopsis - metabolism | Arabidopsis - genetics | Transcription Factors - metabolism | Models, Biological | Arabidopsis - anatomy & histology | Flowers - physiology | MicroRNAs - genetics | Flowers - genetics | RNA, Small Interfering - metabolism | Arabidopsis thaliana | Plant genetics | Physiological aspects | Development | Genetic aspects | Research | Plants | Gene expression | Modeling and Simulation | Computer Science
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11. Full Text About BRAF mutations and p16 expression in melanomas associated with blue nevi or mimicking cellular blue nevi: Author's reply
by De La Fouchardiere, Arnaud and Haddad, Veronique and Paindavoine, Sandrine and Pissaloux, Daniel
American Journal of Surgical Pathology, ISSN 0147-5185, 2016, Volume 40, Issue 6, pp. 858 - 858
SURGERY | FREQUENCY | PATHOLOGY | Life Sciences | Cancer
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12. Full Text Melanomas Associated With Blue Nevi or Mimicking Cellular Blue Nevi: Clinical, Pathologic, and Molecular Study of 11 Cases Displaying a High Frequency of GNA11 Mutations, BAP1 Expression Loss, and a Predilection for the Scalp
by Costa, Sebastian and Byrne, Michelle and Pissaloux, Daniel and Haddad, Veronique and Paindavoine, Sandrine and Thomas, Luc and Aubin, Francois and Lesimple, Thierry and Grange, Florent and Bonniaud, Bertille and Mortier, Laurent and Mateus, Christine and Dreno, Brigitte and Balme, Brigitte and Vergier, Beatrice and de la Fouchardiere, Arnaud
The American Journal of Surgical Pathology, ISSN 0147-5185, 03/2016, Volume 40, Issue 3, pp. 368 - 377
Melanomas associated with blue nevi (MABN) or mimicking cellular blue nevi (MMCBN) represent exceptional variants of malignant cutaneous melanocytic tumors.... 
Blue nevus | CGH-array | GNA11 | GNAQ | BAP1 | Melanoma | SURGERY | blue nevus | IN-SITU HYBRIDIZATION | melanoma | PATHOLOGY | NODULES | UVEAL MELANOMA | MELANOCYTIC TUMORS | CHROMOSOME-8 | Immunohistochemistry | Predictive Value of Tests | Ubiquitin Thiolesterase - analysis | Humans | Middle Aged | Melanoma - enzymology | Male | Nevus, Blue - pathology | Young Adult | Skin Neoplasms - enzymology | Nevus, Blue - genetics | DNA Mutational Analysis | Melanoma - genetics | Skin Neoplasms - mortality | Aged, 80 and over | Adult | Female | Retrospective Studies | Head and Neck Neoplasms - enzymology | Skin Neoplasms - pathology | Genetic Predisposition to Disease | Biomarkers, Tumor - analysis | Down-Regulation | Nevus, Blue - enzymology | GTP-Binding Protein alpha Subunits - genetics | Melanoma - pathology | Tumor Burden | Head and Neck Neoplasms - pathology | Phenotype | Comparative Genomic Hybridization | Biopsy | Scalp | Skin Neoplasms - genetics | Head and Neck Neoplasms - genetics | Aged | Biomarkers, Tumor - genetics | Head and Neck Neoplasms - mortality | Mutation | Melanoma - mortality | Nevus, Blue - mortality | Tumor Suppressor Proteins - analysis | Life Sciences
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13. Full Text Parallel structural evolution of auxin response factors in the angiosperms
: ARF evolution in angiosperms
by Finet, Cédric and Fourquin, Chloé and Vinauger, Marion and Berne-Dedieu, Annick and Chambrier, Pierre and Paindavoine, Sandrine and Scutt, Charles P
The Plant Journal, ISSN 0960-7412, 09/2010, Volume 63, Issue 6, pp. 952 - 959
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14. Full Text An unusual case of desmoplastic melanoma containing an osteoclast-like giant Cell-Rich nodule
by Houang, Michelle and Castillo, Christine and La Marca, Sophie and Combemale, Patrick and Wang, Qing and Paindavoine, Sandrine and Pissaloux, Daniel and De La Fouchardiere, Arnaud
American Journal of Dermatopathology, ISSN 0193-1091, 04/2015, Volume 37, Issue 4, pp. 299 - 304
The authors describe a case of a 5 cm mixed desmoplastic melanoma occurring on the cheek of an 88-year-old white woman. The epidermis showed the features of... 
FISH | osteoclast-like giant cells | desmoplastic melanoma | aCGH | sequencing | VARIANTS | COPY NUMBER CHANGES | MALIGNANT-MELANOMA | EXPRESSION | TUMORS | DERMATOLOGY | Immunohistochemistry | Osteotomy | Cheek | Humans | Hutchinson's Melanotic Freckle - chemistry | Skin Neoplasms - chemistry | Zygoma - surgery | Zygoma - pathology | Osteoclasts - chemistry | Time Factors | Melanoma - genetics | Aged, 80 and over | Female | Cell Differentiation | Skin Neoplasms - surgery | Melanoma - chemistry | Sacrum - pathology | Skin Neoplasms - pathology | Osteoclasts - pathology | Giant Cells - chemistry | Biomarkers, Tumor - analysis | Hutchinson's Melanotic Freckle - pathology | Neoplasm Invasiveness | In Situ Hybridization, Fluorescence | Treatment Outcome | Hutchinson's Melanotic Freckle - surgery | Tumor Burden | Melanoma - secondary | Spinal Neoplasms - secondary | Comparative Genomic Hybridization | Biopsy | Skin Neoplasms - genetics | Zygoma - chemistry | Biomarkers, Tumor - genetics | Hutchinson's Melanotic Freckle - genetics | Melanoma - surgery | Giant Cells - pathology
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15. Full Text Parallel structural evolution of Auxin Response Factors in the angiosperms
by Finet, Cédric and Fourquin, Chloé and Vinauger, M and Annick, Berne-Dedieu and Chambrier, Pierre and Paindavoine, Sandrine and Scutt, Charlie P
Plant Journal, ISSN 0960-7412, 2010, Issue 63, pp. 952 - 959
Life Sciences | Vegetal Biology
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16. Full Text Unpigmented nodule with loss of BAP1 expression in a medium-sized congenital nevus
by Rocas, Delphine and Castillo, Christine and Lamarca, Sophie and Gallateau-Salle, Françoise and Paindavoine, Sandrine and Pissaloux, Daniel and De La Fouchardiere, Arnaud
European Journal of Dermatology, ISSN 1167-1122, 4/2015, Volume 25, Issue 2, pp. 201 - 202
Medicine & Public Health | Dermatology | MELANOMA | MELANOCYTIC NEVI | TUMORS | MUTATION | DERMATOLOGY | Skin Neoplasms - pathology | Tumor Suppressor Proteins - metabolism | Humans | Pigmentation Disorders - pathology | Ubiquitin Thiolesterase - genetics | Pigmentation Disorders - genetics | Nevus, Pigmented - congenital | Skin Neoplasms - metabolism | Nevus, Pigmented - pathology | Nevus, Pigmented - metabolism | Melanocytes - pathology | Skin Neoplasms - congenital | Tumor Suppressor Proteins - genetics | Ubiquitin Thiolesterase - metabolism | Dermis - pathology | Female | Child
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