Articles

UofT Libraries is getting a new library services platform in January 2021.
Learn more about the change.

Search Articles

Advanced search
Help

Catalogue

Articles

Databases

X
Search Filters
Format Format
Format Format
X
Sort by Item Count (A-Z)
Filter by Count
Journal Article (269) 269
Patent (61) 61
Conference Proceeding (50) 50
Magazine Article (9) 9
Book Chapter (5) 5
Web Resource (3) 3
Book / eBook (2) 2
Data Set (1) 1
Dissertation (1) 1
more...
Subjects Subjects
Subjects Subjects
X
Sort by Item Count (A-Z)
Filter by Count
science & technology (95) 95
life sciences & biomedicine (73) 73
animals (54) 54
computer science (48) 48
algorithms (44) 44
fixed constructions (42) 42
technology (42) 42
neurons (37) 37
biochemistry & molecular biology (32) 32
imaging, three-dimensional - methods (28) 28
computer science, interdisciplinary applications (27) 27
humans (26) 26
biochemical research methods (25) 25
neurosciences (25) 25
earth drilling (24) 24
earth drilling, e.g. deep drilling (24) 24
mining (24) 24
obtaining oil, gas, water, soluble or meltable materials or aslurry of minerals from wells (24) 24
neurons - cytology (23) 23
brain (21) 21
image processing, computer-assisted - methods (18) 18
microscopy (18) 18
morphology (18) 18
neurosciences & neurology (18) 18
blasting (17) 17
gene expression (17) 17
heating (17) 17
lighting (17) 17
mechanical engineering (17) 17
software (17) 17
weapons (17) 17
bioinformatics (16) 16
biotechnology & applied microbiology (16) 16
embankments (15) 15
engineering (15) 15
excavations (15) 15
foundations (15) 15
hydraulic engineering (15) 15
mathematical & computational biology (15) 15
soil shifting (15) 15
underground or underwater structures (15) 15
analysis (14) 14
artificial intelligence (14) 14
engineering, electrical & electronic (14) 14
mice (14) 14
neurology (13) 13
performing operations (13) 13
physical sciences (13) 13
transporting (13) 13
biomedicine (12) 12
science & technology - other topics (12) 12
biomedical imaging (11) 11
computational biology/bioinformatics (11) 11
computer appl. in life sciences (11) 11
computer simulation (11) 11
image processing (11) 11
image reconstruction (11) 11
image segmentation (11) 11
neural networks (11) 11
research (11) 11
three-dimensional displays (11) 11
brain - cytology (10) 10
cell biology (10) 10
computational biology (10) 10
drosophila (10) 10
image analysis (10) 10
mathematics (10) 10
statistics & probability (10) 10
automation (9) 9
brain - anatomy & histology (9) 9
imaging, three-dimensional (9) 9
methods (9) 9
neuron morphology (9) 9
neuron reconstruction (9) 9
biomedical engineering (8) 8
databases, factual (8) 8
engineering elements and units (8) 8
general measures for producing and maintaining effectivefunctioning of machines or installations (8) 8
multidisciplinary sciences (8) 8
positive displacement machines for liquids (8) 8
pumps for liquids or elastic fluids (8) 8
thermal insulation in general (8) 8
user-computer interface (8) 8
biological and medical sciences (7) 7
computer science, artificial intelligence (7) 7
fundamental and applied biological sciences. psychology (7) 7
machine learning (7) 7
microscopy - methods (7) 7
microscopy, confocal (7) 7
models, neurological (7) 7
original papers (7) 7
pumps (7) 7
segmentation (7) 7
3d neuron reconstruction (6) 6
biology (6) 6
caenorhabditis elegans - cytology (6) 6
computational biology - methods (6) 6
data mining (6) 6
image interpretation, computer-assisted - methods (6) 6
more...
Library Location Library Location
Language Language
Publication Date Publication Date
Click on a bar to filter by decade
Slide to change publication date range


1. Full Text Bioimage informatics: a new area of engineering biology
by Peng, Hanchuan
Bioinformatics, ISSN 1367-4803, 9/2008, Volume 24, Issue 17, pp. 1827 - 1836
Statistics & Probability | Biochemistry & Molecular Biology | Physical Sciences | Computer Science, Interdisciplinary Applications | Life Sciences & Biomedicine | Technology | Biochemical Research Methods | Computer Science | Mathematics | Biotechnology & Applied Microbiology | Science & Technology | Mathematical & Computational Biology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | General aspects | Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) | Diagnostic Imaging - methods | Computer Graphics | User-Computer Interface | Computational Biology - methods | Models, Biological | Computer Simulation | Computational Biology - trends | Biomedical Engineering - methods | Biomedical Engineering - trends | Index Medicus | Review Paper
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
2. Full Text APP2: Automatic tracing of 3D neuron morphology based on hierarchical pruning of a gray-weighted image distance-tree
by Xiao, Hang and Peng, Hanchuan
Bioinformatics, ISSN 1367-4803, 06/2013, Volume 29, Issue 11, pp. 1448 - 1454
Statistics & Probability | Biochemistry & Molecular Biology | Physical Sciences | Computer Science, Interdisciplinary Applications | Life Sciences & Biomedicine | Technology | Biochemical Research Methods | Computer Science | Mathematics | Biotechnology & Applied Microbiology | Science & Technology | Mathematical & Computational Biology | Microscopy - methods | Algorithms | Animals | Imaging, Three-Dimensional - methods | Drosophila - cytology | Neurons - cytology | Software | Index Medicus | Original Papers
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
3. Full Text Extensible visualization and analysis for multidimensional images using Vaa3D
by Peng, Hanchuan and Bria, Alessandro and Zhou, Zhi and Iannello, Giulio and Long, Fuhui
Nature protocols, ISSN 1754-2189, 01/2014, Volume 9, Issue 1, pp. 193 - 208
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Biochemical Research Methods | Science & Technology | User-Computer Interface | Animals | Neurons - ultrastructure | Brain - anatomy & histology | Computer Simulation | Imaging, Three-Dimensional - methods | Software | Drosophila - anatomy & histology | Image processing | Innovations | Index Medicus
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
4. Full Text V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets
by Long, Fuhui and Simpson, Julie H and Myers, Eugene W and Peng, Hanchuan and Ruan, Zongcai
Nature biotechnology, ISSN 1087-0156, 04/2010, Volume 28, Issue 4, pp. 348 - 353
Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Fundamental and applied biological sciences. Psychology | Vertebrates: nervous system and sense organs | Biological and medical sciences | Diverse techniques | General aspects. Models. Methods | Molecular and cellular biology | Microscopy - methods | Computer Graphics | Radiology Information Systems | User-Computer Interface | Information Storage and Retrieval - methods | Image Interpretation, Computer-Assisted - methods | Imaging, Three-Dimensional - methods | Databases, Factual | Technology application | Usage | Image processing | Three-dimensional graphics | Imaging systems | Properties | Computational biology | Computer programs | Medical imaging | Biomedical research | Microscopy | 3-D graphics | Index Medicus
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
5. Full Text BigNeuron: Large-Scale 3D Neuron Reconstruction from Optical Microscopy Images
by Peng, Hanchuan and Hawrylycz, Michael and Roskams, Jane and Hill, Sean and Spruston, Nelson and Meijering, Erik and Ascoli, Giorgio A
Neuron (Cambridge, Mass.), ISSN 0896-6273, 07/2015, Volume 87, Issue 2, pp. 252 - 256
Neurosciences | Neurosciences & Neurology | Life Sciences & Biomedicine | Science & Technology | Microscopy - methods | Optical Imaging | Algorithms | Animals | Humans | Computational Biology | Neurons - cytology | Models, Neurological | Imaging, Three-Dimensional | Neurons | Microscope and microscopy | Neural circuitry | Datasets | Automation | Brain research | Databases | Microscopy | Morphology | Software | Index Medicus
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
6. Full Text Deep models for brain em image segmentation: Novel insights and improved performance
by Fakhry, Ahmed and Peng, Hanchuan and Ji, Shuiwang
Bioinformatics, ISSN 1367-4803, 08/2016, Volume 32, Issue 15, pp. 2352 - 2358
Statistics & Probability | Biochemistry & Molecular Biology | Physical Sciences | Computer Science, Interdisciplinary Applications | Life Sciences & Biomedicine | Technology | Biochemical Research Methods | Computer Science | Mathematics | Biotechnology & Applied Microbiology | Science & Technology | Mathematical & Computational Biology | Models, Theoretical | Brain | Algorithms | Microscopy, Electron | Neural Networks (Computer) | Index Medicus
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
7. Full Text TeraFly: Real-time three-dimensional visualization and annotation of terabytes of multidimensional volumetric images
by Bria, Alessandro and Iannello, Giulio and Onofri, Leonardo and Peng, Hanchuan
Nature methods, ISSN 1548-7091, 02/2016, Volume 13, Issue 3, pp. 192 - 194
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Biochemical Research Methods | Science & Technology | Microscopy - methods | Computer Graphics | User-Computer Interface | Algorithms | Datasets as Topic | Information Storage and Retrieval - methods | Imaging, Three-Dimensional - methods | Documentation - methods | Software | Databases, Factual | Microscope and microscopy | Methods | Research | Index Medicus
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
8. Full Text A mesoscale connectome of the mouse brain
by Oh, Seung Wook and Oh, Seung Wook and Harris, Julie A and Harris, Julie A and Ng, Lydia and Ng, Lydia and Winslow, Brent and Winslow, Brent and Cain, Nicholas and Cain, Nicholas and Mihalas, Stefan and Mihalas, Stefan and Wang, Quanxin and Wang, Quanxin and Lau, Chris and Lau, Chris and Kuan, Leonard and Kuan, Leonard and Henry, Alex M and Henry, Alex M and Mortrud, Marty T and Mortrud, Marty T and Ouellette, Benjamin and Ouellette, Benjamin and Nguyen, Thuc Nghi and Nguyen, Thuc Nghi and Sorensen, Staci A and Sorensen, Staci A and Slaughterbeck, Clifford R and Slaughterbeck, Clifford R and Wakeman, Wayne and Wakeman, Wayne and Li, Yang and Li, Yang and Feng, David and Feng, David and Ho, Anh and Ho, Anh and Nicholas, Eric and Nicholas, Eric and Hirokawa, Karla E and Hirokawa, Karla E and Bohn, Phillip and Bohn, Phillip and Joines, Kevin M and Joines, Kevin M and Peng, Hanchuan and Peng, Hanchuan and Hawrylycz, Michael J and Hawrylycz, Michael J and Phillips, John W and Phillips, John W and Hohmann, John G and Hohmann, John G and Wohnoutka, Paul and Wohnoutka, Paul and Gerfen, Charles R and Gerfen, Charles R and Koch, Christof and Koch, Christof and Bernard, Amy and Bernard, Amy and Dang, Chinh and Dang, Chinh and Jones, Allan R and Jones, Allan R and Zeng, Hongkui and Zeng, Hongkui
Nature (London), ISSN 0028-0836, 2014, Volume 508, Issue 7495, pp. 207 - 214
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Brain - cytology | Brain - anatomy & histology | Atlases as Topic | Mice, Inbred C57BL | Neuroanatomical Tract-Tracing Techniques | Male | Axons - physiology | Connectome | Cerebral Cortex - cytology | Corpus Striatum - cytology | Animals | Thalamus - cytology | Mice | Models, Neurological | Brain | Usage | Computer-generated environments | Neural circuitry | Computer simulation | Physiological aspects | Research | Enhanced green fluorescent protein | Medical imaging | Neural networks | Neurons | Tomography | Genetic engineering | Methods | Index Medicus
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
9. Full Text From DIADEM to BigNeuron
by Peng, Hanchuan and Meijering, Erik and Ascoli, Giorgio A
Neuroinformatics (Totowa, N.J.), ISSN 1539-2791, 07/2015, Volume 13, Issue 3, pp. 259 - 260
Computational Biology/Bioinformatics | Neurology | Neurosciences | Biomedicine | Bioinformatics | Computer Appl. in Life Sciences | Computer Science, Interdisciplinary Applications | Life Sciences & Biomedicine | Technology | Computer Science | Neurosciences & Neurology | Science & Technology | Neurons - cytology | Algorithms | Humans | Imaging, Three-Dimensional - methods | Index Medicus
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights
10. Full Text LittleQuickWarp: An ultrafast image warping tool
by Qu, Lei and Peng, Hanchuan
Methods (San Diego, Calif.), ISSN 1046-2023, 02/2015, Volume 73, pp. 38 - 42
Image registration | B-spline | Warping | Thin plate spline | Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Biochemical Research Methods | Science & Technology | Animals | Brain - anatomy & histology | Time Factors | Drosophila | Humans | Imaging, Three-Dimensional - methods | Image Enhancement - methods | Brain Mapping - methods | Image Processing, Computer-Assisted - methods | Index Medicus
Journal Article
Details down arrow
Digital rights down arrow
loading Loading Rights