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Nature Biotechnology, ISSN 1087-0156, 03/2018, Volume 36, Issue 3, pp. 272 - 281
Journal Article
BMC Bioinformatics, ISSN 1471-2105, 07/2008, Volume 9, Issue 8, pp. S3 - S3
Background: The Distributed Annotation System (DAS) is a widely adopted protocol for dynamically integrating a wide range of biological data from... 
BIOTECHNOLOGY & APPLIED MICROBIOLOGY | SEQUENCE | DAS | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | Databases, Genetic | Computational Biology - methods | Information Storage and Retrieval - methods | Database Management Systems | Systems Integration
Journal Article
PLoS Computational Biology, ISSN 1553-734X, 12/2012, Volume 8, Issue 12, p. e1002802
  Simply releasing code openly, without support and maintenance, will not ensure extended value; instead, you need to explain how you will actively foster your... 
ALIGNMENT | BIOINFORMATICS SOFTWARE | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | TOOL | Guidelines as Topic | Software | Periodical publishing | Science | Services | Product development | Public software | Computer programs | Linux | Research & development--R&D | Sustainability | Bioinformatics | Open source software | Community | Research & development | R&D
Journal Article
Journal Article
PLoS Computational Biology, ISSN 1553-734X, 03/2012, Volume 8, Issue 3, p. e1002445
  Rutgers and UCSD, and is funded by National Science Foundation (NSF), National Institute of General Medical Sciences, Department of Energy (DOE), National... 
Proteins - genetics | Amino Acid Sequence | Sequence Analysis, Protein - methods | Models, Chemical | Computer Simulation | Molecular Sequence Data | Models, Genetic | Proteins - chemistry | Mutation - genetics | Proteins - ultrastructure | Proteins | Algorithms | Genes | Evolution | Bioinformatics | Data bases | Methods
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2013, Volume 41, Issue 1, pp. D475 - D482
The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) develops tools and resources that provide a structural view of biology... 
VISUALIZATION | SEARCH | INFORMATION | ARCHIVE | BIOCHEMISTRY & MOLECULAR BIOLOGY | SEQUENCE | COMPLEXES | BIOLOGY | CLASSIFICATION | BLAST | STRUCTURE ALIGNMENT | Protein Structure, Tertiary | Computer Graphics | Databases, Protein | Biochemistry - education | Ligands | Protein Conformation | Structural Homology, Protein | Internet | Research
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2011, Volume 39, Issue 1, pp. D392 - D401
The RCSB Protein Data Bank (RCSB PDB) web site (http://www.pdb.org) has been redesigned to increase usability and to cater to a larger and more diverse user... 
SYSTEM | FRAGMENT | CRYSTAL-STRUCTURE | BIOCHEMISTRY & MOLECULAR BIOLOGY | STRUCTURE ALIGNMENT | Computer Graphics | User-Computer Interface | Animals | Databases, Protein | Humans | Systems Integration | Ligands | Protein Conformation | Mice | Internet | Proteins - chemistry
Journal Article
Bioinformatics, ISSN 1367-4803, 12/2010, Volume 26, Issue 23, pp. 2983 - 2985
With the continuous growth of the RCSB Protein Data Bank ( PDB), providing an up-to-date systematic structure comparison of all protein structures poses an... 
FOLD SPACE | DISTANCE | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | SEQUENCE | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | SIMILARITY | Amino Acid Sequence | User-Computer Interface | Algorithms | Databases, Protein | Software | Structural Homology, Protein | Internet | Proteins - chemistry | Applications Note
Journal Article
Nature biotechnology, ISSN 1087-0156, 3/2018, Volume 36, Issue 3, pp. 272 - 281
Genome-scale network reconstructions have helped uncover the molecular basis of metabolism. Here we present Recon3D, a computational resource that includes... 
Journal Article
Journal Article
Human Mutation, ISSN 1059-7794, 12/2018, Volume 39, Issue 12, pp. 1803 - 1813
The Human Genome Variation Society (HGVS) nomenclature guidelines encourage the accurate and standard description of DNA, RNA, and protein sequence variants in... 
sequence variant | HGVS | clinvar | variant representation | GUIDELINES | AMERICAN-COLLEGE | STANDARDS | MEDICAL GENETICS | GENOME | NAME | JOINT-CONSENSUS-RECOMMENDATION | GENETICS & HEREDITY | ASSOCIATION | Nucleotide sequence | Transcription | Nomenclature | Amino acid sequence | Data processing | Genomes | Ribonucleic acid--RNA | Deoxyribonucleic acid--DNA | Informatics
Journal Article
Bioinformatics, ISSN 1367-4803, 11/2018, Volume 34, Issue 21, pp. 3755 - 3758
Abstract Motivation The interactive visualization of very large macromolecular complexes on the web is becoming a challenging problem as experimental... 
VISUALIZATION | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | HTML5 | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | PROTEIN DATA-BANK | ATOM | Applications Notes
Journal Article