X
Search Filters
Format Format
Subjects Subjects
Subjects Subjects
X
Sort by Item Count (A-Z)
Filter by Count
biochemistry & molecular biology (9) 9
index medicus (8) 8
measuring (7) 7
physics (7) 7
testing (7) 7
molecular dynamics simulation (6) 6
polymers (5) 5
analysis (4) 4
computational biology (4) 4
dna (4) 4
dna - chemistry (4) 4
dna, superhelical - chemistry (4) 4
dna-molecules (4) 4
investigating or analysing materials by determining theirchemical or physical properties (4) 4
molecular dynamics (4) 4
organization (4) 4
performing operations (4) 4
positron annihilation (4) 4
simulation (4) 4
topological domains (4) 4
transporting (4) 4
actuator (3) 3
cohesin (3) 3
coli topoisomerase-iv (3) 3
dynamics (3) 3
escherichia-coli (3) 3
fluorescence (3) 3
measurement of mechanical vibrations or ultrasonic, sonic orinfrasonic waves (3) 3
molecular-dynamics simulations (3) 3
molecules (3) 3
nucleic acid conformation (3) 3
physics, atomic, molecular & chemical (3) 3
polymer science (3) 3
principles (3) 3
single-molecule (3) 3
3d genome (2) 2
annihilation lifetime spectroscopy (2) 2
ausleuchtung (2) 2
biologicals (2) 2
biophysics (2) 2
carbon nanotube (2) 2
carbon nanotubes (2) 2
chains (2) 2
chemistry (2) 2
chemistry, physical (2) 2
chromatin (2) 2
chromosomes (2) 2
cladding or plating by soldering or welding (2) 2
compass force-field (2) 2
cutting by applying heat locally, e.g. flame cutting (2) 2
distributions (2) 2
dna topoisomerases (2) 2
dna, catenated - chemistry (2) 2
dna, circular - chemistry (2) 2
dna, superhelical - metabolism (2) 2
elektronenmikroskopie (2) 2
enhancer elements, genetic (2) 2
ethylenvinylacetat (2) 2
eva (2) 2
freies volumen (2) 2
human genome (2) 2
hydrogels (2) 2
ii topoisomerases (2) 2
inorganic chemistry (2) 2
liquid (2) 2
machine tools (2) 2
metal-working not otherwise provided for (2) 2
model (2) 2
molecular-dynamics (2) 2
molekulardynamik (2) 2
molekulare simulation (2) 2
nanofluidic channels (2) 2
nanostructure (2) 2
organic chemistry (2) 2
polymeric nanocomposites (2) 2
positron-annihilation (2) 2
positronenvernichtung (2) 2
promoter regions, genetic (2) 2
scanning electron microscopy (2) 2
seats specially adapted for vehicles (2) 2
silica hydrogel (2) 2
silicon dioxide (2) 2
soldering or unsoldering (2) 2
statistics (2) 2
theoretical and computational chemistry (2) 2
topology (2) 2
transcription, genetic (2) 2
vehicle passenger accommodation not otherwise providedfor (2) 2
vehicles in general (2) 2
welding (2) 2
working by laser beam (2) 2
absorption (1) 1
actuation (1) 1
actuators (1) 1
aging (1) 1
aktor (1) 1
algorithm (1) 1
algorithms (1) 1
archive (1) 1
atom (1) 1
more...
Language Language
Publication Date Publication Date
Click on a bar to filter by decade
Slide to change publication date range


Nucleic Acids Research, ISSN 0305-1048, 02/2018, Volume 46, Issue 4, pp. 1648 - 1660
Abstract Using molecular dynamics simulations, we show here that growing plectonemes resulting from transcription-induced supercoiling have the ability to... 
ORGANIZATION | COLI TOPOISOMERASE-IV | 3D GENOME | SINGLE-MOLECULE | GENOME ARCHITECTURE | BIOCHEMISTRY & MOLECULAR BIOLOGY | COHESIN | TOPOLOGICAL DOMAINS | ENHANCERS | DNA-MOLECULES | PRINCIPLES | Computational Biology
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2019, Volume 47, Issue 2, pp. 521 - 532
Abstract Topologically associating domains (TADs) are megabase-sized building blocks of interphase chromosomes in higher eukaryotes. TADs are chromosomal... 
ORGANIZATION | CHROMATIN LOOPS | DNA | BIOCHEMISTRY & MOLECULAR BIOLOGY | RNA-TRANSCRIPTION | COHESIN | TOPOLOGICAL DOMAINS | ATTACHMENT SITES | PRINCIPLES | MAMMALIAN GENOMES | TORSIONAL TENSION | Promoter Regions, Genetic | Chromatin | DNA, Superhelical | Enhancer Elements, Genetic | Transcription, Genetic | Chromosomes - chemistry | Models, Genetic | Survey and Summary
Journal Article
Polymers, ISSN 2073-4360, 10/2018, Volume 10, Issue 10, p. 1126
It has been a puzzle how decondensed interphase chromosomes remain essentially unknotted. The natural expectation is that in the presence of type II DNA... 
Chromatin | DNA knots | Chromatin loop extrusion | DNA topoisomerases | Cohesin | Biopolymers | Chromosomes | POLYMER SCIENCE | MECHANISM | TOPOISOMERASES | chromosomes | TERRITORIES | chromatin | PRINCIPLES | ORGANIZATION | chromatin loop extrusion | cohesin | HUMAN GENOME | DNA | biopolymers | MOLECULAR-DYNAMICS SIMULATIONS | DOMAINS
Journal Article
Methods in Molecular Biology, ISSN 1064-3745, 2017, Volume 1624, pp. 339 - 372
A detailed protocol of molecular dynamics simulations of supercoiled DNA molecules that can be in addition knotted or catenated is described. We also describe... 
Molecular dynamics | Supercoiled DNA | DNA gyrase | DNA topoisomerases | DNA knots and catenanes | DNA Gyrase - metabolism | Computational Biology - methods | DNA - chemistry | Algorithms | DNA, Superhelical - chemistry | Nucleic Acid Conformation | DNA, Catenated - chemistry | Molecular Dynamics Simulation
Journal Article
Materials Science Forum, ISSN 0255-5476, 11/2012, Volume 733, pp. 183 - 189
In this contribution a generalized picture of the cavity number behavior is obtained by means of molecular dynamics simulations and consequent free volume... 
Molecular dynamics | Relative intensity | Positron annihilation | Simulation
Journal Article
Journal of Chemical Physics, ISSN 0021-9606, 05/2013, Volume 138, Issue 18, p. 184904
Investigation of segregation of polymer coils in open channel was extended relative to previous studies from flexible chains to semiflexible chains. Our... 
POLYMERS | STATISTICS | DNA | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | CONFINEMENT | DYNAMICS | MODEL | SIMULATION | FREE-ENERGY | NANOFLUIDIC CHANNELS | Nanostructures - chemistry | Polymers - chemistry | Macromolecular Substances - chemistry | Molecular Dynamics Simulation | Coils | Confinement | Simulation | Segregations | Nanostructure | Chains (polymeric) | Channels | Free energy
Journal Article
European Polymer Journal, ISSN 0014-3057, 2011, Volume 47, Issue 7, pp. 1477 - 1484
The silica hydrogels prepared at physiological conditions were characterized with respect to the glucose diffusion properties and the porosity by employing... 
Silica hydrogel | Glucose | Diffusion coefficient | Silane | POLYMERS | POLYMER SCIENCE | PERMEABILITY | BIOLOGICALS | PERFORMANCE | RELEASE | CHROMATOGRAPHY | MOLECULES | XEROGELS | BIOSENSORS | OXIDASE | Dextrans | Hydrogels | Imaging | Porosity | Diffusion | Silicon dioxide
Journal Article
Polymer, ISSN 0032-3861, 05/2009, Volume 50, Issue 10, pp. 2209 - 2219
Journal Article
Sensors & Actuators: B. Chemical, ISSN 0925-4005, 09/2013, Volume 186, pp. 701 - 710
This paper reports strong, reversible actuation of nanocomposites on the base of ethylene vinyl acetate (EVA) filled with multiwalled (MWCNTs) and singlewalled... 
Carbon nanotubes | Nanocomposite | Dynamic mechanical analysis | Ethylene vinyl acetate copolymer | Actuator | ELECTROCHEMISTRY | CHEMISTRY, ANALYTICAL | INSTRUMENTS & INSTRUMENTATION | COMPOSITES | ACTUATORS | Ethylene | Nanotubes
Journal Article
by Bultet, Lisandra Aguilar and Aguilar-Rodríguez, José and Ahrens, Christian H and Ahrné, Erik Lennart and Ai, Ni and Aimo, Lucila and Akalin, Altuna and Aleksiev, Tyanko and Alocci, Davide and Altenhoff, Adrian and Alves, Isabel and Ambrosini, Giovanna and Pedone, Pascale Anderle and Angelino, Paolo and Anisimova, Maria and Appel, Ron and Argoud-Puy, Ghislaine and Arnold, Konstantin and Arpat, Bulak and Artimo, Panu and Ascencao, Kelly and Auchincloss, Andrea and Axelsen, Kristian and Gerritsen, Vivienne Baillie and Bairoch, Amos and Bansal, Parit and Baratin, Delphine and Barbato, Alessandro and Barbié, Valérie and Barras, David and Barreiro, Maria and Barret, Sophie and Bastian, Frederic and Neto, Teresamanuela Batista and Baudis, Michael and Beaudoing, Emmanuel and Beckmann, Jacques S and Bekkar, Amel Kawter and Ben Hamida Cammoun, Leila and Benmohammed, Sara and Bernard, Madeleine and Bertelli, Claire and Bertoni, Martino and Bienert, Stefan and Bignucolo, Olivier and Bilbao, Aivett and Bilican, Adem and Blank, Diana and Blatter, Marie-Claude and Blum, Lorenz and Bocquet, Jocelyne and Boeckmann, Brigitte and Bolleman, Jerven Tjalling and Bordoli, Lorenza and Bosshard, Lars and Bouchet, Gerard and Bougueleret, Lydie and Boutet, Emmanuel and Bovigny, Christophe and Bratulic, Sinisa and Breuza, Lionel and Bridge, Alan James and Britan, Aurore and Brito, Francisco and Frazão, Josias Brito and Bruggmann, Rémy and Bucher, Philipp and Burdet, Frédéric and Burger, Lukas and Cabello, Elena Maria and Gomez, Ruben Martin Cabezon and Calderon, Sandra and Cannarozzi, Gina and Carl, Sarah and Casas, Cristina Casals and Catherinet, Sebastien and Périer, Rouayda Cavin and Charpilloz, Christophe and Chaskar, Prasad Datatray and Chen, Weihua and Pepe, Anush Chiappino and Chopard, Bastien and Chu, Hoi Yee and Civic, Natacha and Claassen, Manfred and Clottu, Sylvie and Colombo, Martino and Cosandier, Isabelle and Coudert, Elisabeth and Crespo, Isaac and Creus, Marc and Cuche, Béatrice and Cuendet, Michel A and Cusin, Isabelle and Daga, Neha and Daina, Antoine and Dauvillier, Jér Ôme and David, Fabrice and Davydov, Iakov and De Sa Ricca Manadelo Ferreira, Mariana and ... and SIB Swiss Inst Bioinformatics
Nucleic Acids Research, ISSN 0305-1048, 2016, Volume 44, Issue 1, pp. D27 - D37
The SIB Swiss Institute of Bioinformatics (www.isb-sib.ch) provides world-class bioinformatics databases, software tools, services and training to the... 
PROTEIN MODELS | QUALITY | REGULATORY SITES | LANDSCAPE | KNOWLEDGEBASE | ARCHIVE | BIOCHEMISTRY & MOLECULAR BIOLOGY | REPOSITORY | EXPRESSION DATA | TOOLS | PREDICTION | Database Issue
Journal Article
Journal of Chemical Physics, ISSN 0021-9606, 08/2009, Volume 131, Issue 6, pp. 064903 - 064903-10
In this work we analyze and compare the free volume of a polymer system poly(vinyl methylether) (PVME) at 300 K obtained by the two direct but different... 
ANNIHILATION LIFETIME SPECTROSCOPY | THIN-FILMS | liquid structure | VORONOI POLYHEDRA | TEMPERATURE-DEPENDENCE | LIQUID | ALGORITHM | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | positron annihilation | DISTRIBUTIONS | GLASS | COMPASS FORCE-FIELD | polymer melts | liquid theory | molecular dynamics method | polymer structure |