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Bioinformatics, ISSN 1367-4803, 02/2019, Volume 35, Issue 4, pp. 546 - 552
Abstract Motivation Orthologous gene identification is fundamental to all aspects of biology. For example, ortholog identification between species can provide... 
PLANT | EVOLUTIONARY | DATABASE | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | REFSEQ | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | TIMETREE | DIVERGENCE TIMES | FUNCTIONAL ANNOTATIONS | PREDICTION | Original Papers
Journal Article
Bioinformatics, ISSN 1367-4803, 12/2017, Volume 33, Issue 24, pp. 3922 - 3928
Motivation: One of the main challenges with bioinformatics software is that the size and complexity of datasets necessitate trading speed for accuracy, or... 
EVOLUTION | TANDEM REPEATS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | DNA | SIMPLE SEQUENCE REPEATS | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | PRIMER | SELECTION | EFFICIENT | DISCOVERY | PROGRAM | Computational Biology - methods | Software | Algorithms | Microsatellite Repeats | Index Medicus | Original Papers
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 02/2019, Volume 47, Issue 3, pp. 1123 - 1131
Abstract Different species, genes, and locations within genes use different codons to fine-tune gene expression. Within genes, the ramp sequence assists in... 
USAGE BIAS | DATABASE | REFSEQ | BIOCHEMISTRY & MOLECULAR BIOLOGY | GENE-EXPRESSION | RIBOSOME | TUNE | Sequence Analysis, RNA - methods | Algorithms | Animals | Codon | Software | Sequence Analysis, DNA - methods | RNA, Transfer | Computational Biology
Journal Article
PeerJ, ISSN 2167-8359, 2019, Volume 7, pp. e6984 - e6984
Common phylogenomic approaches for recovering phylogenies are often time-consuming and require annotations for orthologous gene relationships that are not... 
Codon | Analysis | Genes | Amino acids | Phylogeny | Methods | Computer-aided manufacturing | Biotechnology | Taxonomy | Genomics | Genomes | Biology | Gene expression | Data bases | Proteins | Algorithms | Aversion | Phylogenetics | Codons | Species | Bioinformatics | Codon usage bias | Tree of life | Alignment-free | Codon aversion
Journal Article
Alzheimer's & Dementia: The Journal of the Alzheimer's Association, ISSN 1552-5260, 07/2018, Volume 14, Issue 7, pp. P517 - P517
Journal Article
Genome, 09/2019
Carbapenem resistant bacteria have quickly become a worldwide concern in nosocomial infections. Of the seven known carbapenemases, four have been shown to be... 
Index Medicus
Journal Article
by Cruchaga, Carlos and Karch, Celeste M and Jin, Sheng Chih and Benitez, Bruno A and Cai, Yefei and Guerreiro, Rita and Harari, Oscar and Norton, Joanne and Budde, John and Bertelsen, Sarah and Jeng, Amanda T and Cooper, Breanna and Skorupa, Tara and Carrell, David and Levitch, Denise and Hsu, Simon and Choi, Jiyoon and Ryten, Mina and Hardy, John and Trabzuni, Daniah and Weale, Michael E and Ramasamy, Adaikalavan and Smith, Colin and Sassi, Celeste and Bras, Jose and Gibbs, J. Raphael and Hernandez, Dena G and Lupton, Michelle K and Powell, John and Forabosco, Paola and Ridge, Perry G and Corcoran, Christopher D and Tschanz, Joann T and Norton, Maria C and Munger, Ronald G and Schmutz, Cameron and Leary, Maegan and Demirci, F. Yesim and Bamne, Mikhil N and Wang, Xingbin and Lopez, Oscar L and Ganguli, Mary and Medway, Christopher and Turton, James and Lord, Jenny and Braae, Anne and Barber, Imelda and Brown, Kristelle and Passmore, Peter and Craig, David and Johnston, Janet and McGuinness, Bernadette and Todd, Stephen and Heun, Reinhard and Kölsch, Heike and Kehoe, Patrick G and Hooper, Nigel M and Vardy, Emma R.L.C and Mann, David M and Pickering-Brown, Stuart and Kalsheker, Noor and Lowe, James and Morgan, Kevin and David Smith, A and Wilcock, Gordon and Warden, Donald and Holmes, Clive and Pastor, Pau and Lorenzo-Betancor, Oswaldo and Brkanac, Zoran and Scott, Erick and Topol, Eric and Rogaeva, Ekaterina and Singleton, Andrew B and Kamboh, M. Ilyas and St George-Hyslop, Peter and Cairns, Nigel and Morris, John C and Kauwe, John S. K and Goate, Alison M and Alzheimers Res UK ARUK Consortium and UKBEC and Alzheimer's Research UK (ARUK) Consortium
Nature, ISSN 0028-0836, 2014, Volume 505, Issue 7484, pp. 550 - 554
Journal Article
Journal Article
PLoS ONE, ISSN 1932-6203, 03/2012, Volume 7, Issue 3, pp. e33066 - e33066
Background: Selenium is an essential trace element in mammals due to its presence in proteins in the form of selenocysteine (Sec). Human genome codes for 25... 
MITOCHONDRIAL THIOREDOXIN REDUCTASE | 21ST AMINO-ACID | GENE | MULTIDISCIPLINARY SCIENCES | GLUTATHIONE-PEROXIDASE | FUNCTIONAL-CHARACTERIZATION | SECIS ELEMENT | IDENTIFICATION | MULTIPLE SEQUENCE ALIGNMENT | EXPRESSION | SELENOCYSTEINE INCORPORATION | Gene Duplication | Mammals - genetics | Proteome - genetics | Alternative Splicing | Selenoproteins - genetics | Vertebrates - genetics | Humans | Molecular Sequence Data | Phylogeny | Selenoproteins - classification | Pseudogenes - genetics | Protein Isoforms - metabolism | Protein Isoforms - classification | Base Sequence | Amino Acid Sequence | Mammals - metabolism | Proteome - classification | Sequence Homology, Nucleic Acid | Selenoproteins - metabolism | Sequence Homology, Amino Acid | Animals | Proteomics | Mutation | Proteome - metabolism | Vertebrates - metabolism | Evolution, Molecular | Protein Isoforms - genetics | Cysteine | Evolutionary biology | Ligases | Analysis | Genes | Genomics | Genomes | Thioredoxin | Alternative splicing | Laboratories | Fines & penalties | Biological evolution | Biology | Organisms | Medical schools | Proteins | Glutathione reductase | Reproduction (copying) | Phylogenetics | Evolution | Selenium | Bioinformatics | Glutathione | Splicing | Selenophosphate | Selenocysteine | Zebrafish | Mammals | Disease prevention | Vertebrates | Pseudogenes | Algorithms | Placenta | Acids | Womens health | Isoforms | Glutaredoxin | Trace elements | Gene duplication | Selenoproteins | Selenophosphate synthetase 2 | Information theory | Cancer | Reductase | Index Medicus | Metabolisme | Vertebrats | Mamífers | Proteïnes
Journal Article
PLoS Genetics, ISSN 1553-7390, 10/2014, Volume 10, Issue 10, pp. e1004758 - e1004758
Journal Article