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1. Full Text Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques
by Fuchs, Bernhard M and Amann, Rudolf
Nature Reviews Microbiology, ISSN 1740-1526, 05/2008, Volume 6, Issue 5, pp. 339 - 348
The ribosomal-RNA (rRNA) approach to microbial evolution and ecology has become an integral part of environmental microbiology. Based on the patchy... 
ROLLING-CIRCLE AMPLIFICATION | MOSBY MUD VOLCANO | ANAEROBIC AMMONIUM OXIDATION | ESCHERICHIA-COLI | LABELED OLIGONUCLEOTIDE | POLYNUCLEOTIDE PROBES | MICROBIOLOGY | TARGETED OLIGONUCLEOTIDE PROBES | BACTERIAL-CELLS | NORTH-SEA | 16S RIBOSOMAL-RNA | Archaea - isolation & purification | Phylogeny | RNA Probes - chemistry | Archaea - classification | Bacteria - genetics | RNA, Ribosomal - genetics | Ribotyping - methods | Bacteria - isolation & purification | Sensitivity and Specificity | Bacteria - classification | Archaea - genetics | RNA, Ribosomal - analysis | Oligonucleotide Probes - chemistry | In Situ Hybridization, Fluorescence - methods | Usage | Genetic aspects | Research | In situ hybridization | Microbial colonies | Identification and classification
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2. Full Text Uncultivated microbes in need of their own taxonomy
by Konstantinidis, Konstantinos T and Rosselló-Móra, Ramon and Amann, Rudolf
ISME Journal, ISSN 1751-7362, 11/2017, Volume 11, Issue 11, pp. 2399 - 2406
The great majority of microbial species remains uncultured, severely limiting their taxonomic characterization and thus communication among scientists.... 
UNCULTURED BACTERIA | NAMES | TAXA | ARCHAEA | SINGLE CELLS | SPECIES DEFINITION | CLASSIFICATION | ECOLOGY | MICROBIOLOGY | PROPOSAL | CANDIDATUS | PLACE | Bacteria - growth & development | Bacteria - isolation & purification | Computational Biology | Bacteria - classification | Archaea - genetics | Archaea - isolation & purification | Phylogeny | Archaea - classification | Bacteria - genetics | Archaea - growth & development | Nucleotide sequence | Taxonomy | Nomenclature | Archaea | Genomes | Standards | Gene sequencing | Names | Descriptions | Taxa | Microorganisms | Next-generation sequencing | Bacteria | Bioinformatics | Deoxyribonucleic acid--DNA
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3. Full Text öffentliche Sequenzdaten sollten rasch wirklich frei zugänglich sein
by Amann, Rudolf
BioSpektrum, ISSN 0947-0867, 04/2019, Volume 25, Issue 2, pp. 119 - 119
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4. Full Text Past and future species definitions for Bacteria and Archaea
by Rosselló-Móra, Ramon and Amann, Rudolf
Systematic and Applied Microbiology, ISSN 0723-2020, 06/2015, Volume 38, Issue 4, pp. 209 - 216
Species is the basic unit of biological diversity. However, among the different microbiological disciplines there is an important degree of disagreement as to... 
Species definition | Genomics | Species concept | MICROBIOLOGY | SP NOV | 16S | SALINIBACTER-RUBER | LIVING TREE PROJECT | MULTILOCUS SEQUENCE-ANALYSIS | DNA-DNA HYBRIDIZATION | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | AD-HOC-COMMITTEE | GENOMIC INSIGHTS | PROKARYOTIC TAXONOMY | RNA GENE-SEQUENCES | Genome, Bacterial - genetics | Genome, Archaeal - genetics | Bacteria - classification | Archaea - genetics | Archaea - classification | Bacteria - genetics | Sequence Analysis, DNA | Bacteria
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5. Full Text Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences
by Yarza, Pablo and Yilmaz, Pelin and Pruesse, Elmar and Glöckner, Frank Oliver and Ludwig, Wolfgang and Schleifer, Karl-Heinz and Whitman, William B and Euzéby, Jean and Amann, Rudolf and Rosselló-Móra, Ramon
Nature Reviews Microbiology, ISSN 1740-1526, 2014, Volume 12, Issue 9, pp. 635 - 645
Publicly available sequence databases of the small subunit ribosomal RNA gene, also known as 16S rRNA in bacteria and archaea, are growing rapidly, and the... 
PHYLUM | LIVING TREE PROJECT | SUPERPHYLUM | TAXONOMY | ORDER | ORIGIN | MICROBIOLOGY | PROPOSAL | TIME | DNA, Archaeal - genetics | DNA, Archaeal - chemistry | Computational Biology | DNA, Bacterial - chemistry | Phylogeny | Archaea - classification | Bacteria - genetics | DNA, Ribosomal - chemistry | Sequence Analysis, DNA | RNA, Ribosomal, 16S - chemistry | DNA, Bacterial - genetics | Ribotyping | Bacteria - classification | RNA, Ribosomal, 16S - genetics | Archaea - genetics | Databases, Nucleic Acid | DNA, Ribosomal - genetics | Genomic libraries | RNA | Bacteria | Genetic aspects | Management | Archaeabacteria | Identification and classification
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6. Full Text Functional characterization of polysaccharide utilization loci in the marine Bacteroidetes 'Gramella forsetii' KT0803
by Kabisch, Antje and Otto, Andreas and König, Sten and Becher, Dörte and Albrecht, Dirk and Schüler, Margarete and Teeling, Hanno and Amann, Rudolf I and Schweder, Thomas
ISME Journal, ISSN 1751-7362, 2014, Volume 8, Issue 7, pp. 1492 - 1502
Members of the phylum Bacteroidetes are abundant in many marine ecosystems and are known to have a pivotal role in the mineralization of complex organic... 
alginate | polysaccharide utilization locus | laminarin | TonB-dependent transporter | proteomics | Bacteroidetes | BACTERIA | TONB | CELL-SURFACE | MICROBIOLOGY | BACTERIOPLANKTON | QUANTITATIVE-ANALYSIS | OUTER-MEMBRANE PROTEINS | METABOLISM | SOFTWARE TOOL | ALGINIC ACID | ECOLOGY | GENOME ANALYSIS | Seawater - microbiology | Membrane Proteins - genetics | Carbon Cycle - genetics | Glucuronic Acid - genetics | Polysaccharides - genetics | Synteny | Glucuronic Acid - metabolism | North Sea | Genetic Loci | Alginates - metabolism | Polysaccharides - metabolism | Bacteroidetes - metabolism | Glucans - metabolism | Membrane Proteins - metabolism | Gene Expression Regulation, Bacterial | Bacteroidetes - genetics | Hexuronic Acids - metabolism | Original
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7. Full Text Fluorescence In Situ Hybridization and Catalyzed Reporter Deposition for the Identification of Marine Bacteria
by Annelie Pernthaler and Jakob Pernthaler and Rudolf Amann
Applied and Environmental Microbiology, ISSN 0099-2240, 06/2002, Volume 68, Issue 6, pp. 3094 - 3101
Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit... 
PELAGIC BACTERIA | TYRAMIDE SIGNAL AMPLIFICATION | MESSENGER-RNA | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | PLANKTONIC BACTERIA | MICROBIOLOGY | TARGETED OLIGONUCLEOTIDE PROBES | HORSERADISH-PEROXIDASE | MICROBIAL COMMUNITY | COMMUNITY COMPOSITION | WHOLE-CELL HYBRIDIZATION | 16S RIBOSOMAL-RNA | Marine Biology | Oligonucleotide Probes | Bacteria - isolation & purification | Horseradish Peroxidase - metabolism | Environment | Catalysis | In Situ Hybridization, Fluorescence - methods | Water Microbiology | Microbiological research | Analysis | Fluorescence | Physiological aspects | Permeability | In situ hybridization | Marine bacteria | Methods
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8. Full Text Phylogenetic identification and in situ detection of individual microbial cells without cultivation
by Amann, R.I and Ludwig, W and Schleifer, K.-H
Microbiological Reviews, ISSN 0146-0749, 1995, Volume 59, Issue 1, pp. 143 - 169
The frequent discrepancy between direct microscopic counts and numbers of culturable bacteria from environmental samples is just one of several indications... 
GEN-NOV | SEQUENCE-ANALYSIS | FLOW CYTOMETRIC DETECTION | MARINE-BACTERIA | MICROBIOLOGY | POLYMERASE CHAIN-REACTION | SP-NOV | FLUORESCENCE INSITU HYBRIDIZATION | TARGETED OLIGONUCLEOTIDE PROBES | 16S RIBOSOMAL-RNA | SULFATE-REDUCING BACTERIA | Genetic Variation | RNA, Ribosomal, 23S - genetics | Bacteria - isolation & purification | Base Sequence | RNA, Ribosomal, 16S - analysis | RNA, Ribosomal, 23S - analysis | Molecular Sequence Data | RNA, Bacterial - genetics | RNA, Bacterial - isolation & purification | RNA, Ribosomal, 16S - genetics | Bacteria - genetics | In Situ Hybridization - methods | Bacteria | Genetic aspects | Microbiology | Identification and classification
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9. Full Text An alternative polysaccharide uptake mechanism of marine bacteria
by Reintjes, Greta and Arnosti, Carol and Fuchs, Bernhard M and Amann, Rudolf
ISME Journal, ISSN 1751-7362, 07/2017, Volume 11, Issue 7, pp. 1640 - 1650
Heterotrophic microbial communities process much of the carbon fixed by phytoplankton in the ocean, thus having a critical role in the global carbon cycle. A... 
PROTEOBACTERIA | EXTRACELLULAR ENZYME-ACTIVITIES | OCEAN | ORGANIC-MATTER | POPULATIONS | ECOLOGY | MICROBIOLOGY | DIVERSITY | PROVINCES | COMMUNITIES | ASSIMILATION | NORTH-SEA | Seawater - microbiology | Atlantic Ocean | Phytoplankton | Biological Transport - physiology | Alteromonadaceae - physiology | Bacteroidetes - physiology | Flavobacteriaceae - physiology | Polysaccharides - metabolism | Cell culture | Microbial activity | Communities | Fluorescence | Staining | Labelling | Fragmentation | Polysaccharides | Microorganisms | Plankton | Periplasmic space | Bacteria | Illumination | Digestive tract | Pure culture | Saccharides | Enzymes | Extracellular enzymes | Fragments | Ecology | Oligosaccharides | Substrates | Carbon cycle | Hydrolysis | Dynamic tests | Microscopy | Cytoplasm | Original
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10. Full Text Recurrent patterns of microdiversity in a temperate coastal marine environment
by Chafee, Meghan and Fernàndez-Guerra, Antonio and Buttigieg, Pier Luigi and Gerdts, Gunnar and Eren, A Murat and Teeling, Hanno and Amann, Rudolf I
ISME Journal, ISSN 1751-7362, 01/2018, Volume 12, Issue 1, pp. 237 - 252
Temperate coastal marine environments are replete with complex biotic and abiotic interactions that are amplified during spring and summer phytoplankton... 
EXTRAPOLATION | RAREFACTION | VARIABILITY | BACTERIAL COMMUNITIES | ECOLOGY | MICROBIOLOGY | DIVERSITY | COOCCURRENCE | COHERENCE | PHYTOPLANKTON | VIRUSES | ABUNDANCE | rRNA 16S | Communities | Offshore structures | Algae | Transition zone | Ribonucleic acid--RNA | Eutrophication | Marine environment | Bacterioplankton | Dissolved organic matter | Plankton | Annual variations | Phytoplankton | Coastal environments | Sampling | Community composition | Original
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11. Full Text Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments
by Kubo, Kyoko and Lloyd, Karen G and F Biddle, Jennifer and Amann, Rudolf and Teske, Andreas and Knittel, Katrin
ISME Journal, ISSN 1751-7362, 10/2012, Volume 6, Issue 10, pp. 1949 - 1965
Members of the highly diverse Miscellaneous Crenarchaeotal Group (MCG) are globally distributed in various marine and continental habitats. In this study, we... 
Crenarchaeota | MCG | Marine sediments | Benthic archaea | crenarchaeota | CLONE LIBRARIES | DEEP SUBSEAFLOOR SEDIMENTS | IN-SITU HYBRIDIZATION | CATALYZED REPORTER DEPOSITION | MICROBIOLOGY | PACIFIC-OCEAN | MICROBIAL COMMUNITIES | ANAEROBIC OXIDATION | RIBOSOMAL-RNA SEQUENCES | MOSBY MUD VOLCANO | benthic archaea | ECOLOGY | marine sediments | SULFATE-REDUCING BACTERIA | DNA, Archaeal - genetics | Geologic Sediments - microbiology | Sulfates - metabolism | Methane - metabolism | Polymerase Chain Reaction | Estuaries | RNA, Ribosomal, 16S - genetics | Archaea - genetics | Phylogeny | Biodiversity | Archaea - classification | Sequence Analysis, DNA | Original
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12. Full Text Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom
by Hanno Teeling and Bernhard M. Fuchs and Dörte Becher and Christine Klockow and Antje Gardebrecht and Christin M. Bennke and Mariette Kassabgy and Sixing Huang and Alexander ]. Mann and Jost Waldmann and Marc Weber and Anna Klindworth and Andreas Otto and Jana Lange and Jörg Bernhardt and Christine Reinsch and Michael Hecker and Jörg Peplies and Frank D. Bockelmann and Ulrich Callies and Gunnar Gerdts and Antje Wichels and Karen H. Wiltshire and Frank Oliver Glöckner and Thomas Schweder and