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SCIENTIFIC REPORTS, ISSN 2045-2322, 11/2019, Volume 9, Issue 1, pp. 1 - 14
We developed a deconvolution software for light sheet microscopy that uses a theoretical point spread function, which we derived from a model of image... 
ULTRAMICROSCOPY | FLUORESCENCE MICROSCOPY | WIDE-FIELD | MULTIDISCIPLINARY SCIENCES | RESOLUTION
Journal Article
Methods in Molecular Biology, ISSN 1064-3745, 2017, Volume 1563, pp. 33 - 49
Light-sheet microscopy is an effective technique in neuroscience, developmental biology, and cancer research for visualizing and analyzing cellular networks... 
3DISCO | Peroxide elimination | Vascular networks | 3D reconstruction | Whole-mount immune-labeling | Alzheimer disease | Chemical clearing | Light-sheet microscopy | Immunohistochemistry - methods | Brain | Animals | Microscopy, Fluorescence - methods | Spinal Cord | Mice | Imaging, Three-Dimensional | Microscopy, Fluorescence - instrumentation
Journal Article
Microscopy Research and Technique, ISSN 1059-910X, 09/2018, Volume 81, Issue 9, pp. 929 - 935
Here, we present an optically optimized system for static ultramicroscopy imaging technique. The unit for generating an ultra‐thin light sheet employs aspheric... 
optical parameters characterization | uniform beam profile | Gaussian beam | light sheet microscopy | ANATOMY & MORPHOLOGY | BIOLOGY | MICROSCOPY | Biological properties | Organic chemistry | Image resolution | Gaussian beams (optics) | Optical properties | Refractivity | New combinations | Optical components | Biological samples
Journal Article
Journal of Biophotonics, ISSN 1864-063X, 01/2014, Volume 7, Issue 1‐2, pp. 117 - 125
Journal Article
Microscopy Research and Technique, ISSN 1059-910X, 09/2018, Volume 81, Issue 9, pp. 929 - 935
Journal Article
PLoS ONE, ISSN 1932-6203, 08/2012, Volume 7, Issue 8
In the Author Contributions section, Saiedeh Saghafi (SS) should be listed as one of the persons who performed the experiments. Citation: Becker K, Jährling N,... 
Dehydration
Journal Article
Journal of Biophotonics, ISSN 1864-063X, 06/2018, Volume 11, Issue 6, pp. e201700213 - n/a
Based on the modal analysis method, we developed a model that describes the output beam of a diode‐pumped solid state (DPSS) laser emitting a multimode beam.... 
light sheet generator | constructed gaussian beam | multimode laser | Light sheet microscopy | laser beam shaping | ULTRAMICROSCOPY | BIOPHYSICS | BIOCHEMICAL RESEARCH METHODS | OPTICS | Lasers | Analysis | Modal analysis | Laser beams | Gaussian beams (optics) | Superposition (mathematics) | Acetylcholine receptors
Journal Article
Cold Spring Harbor Protocols, ISSN 1940-3402, 08/2013, Volume 2013, Issue 8, pp. 704 - 713
Ultramicroscopy (UM) is a powerful imaging technique that achieves precise and accurate three-dimensional (3D) reconstructions of intact macroscopic specimens... 
Microscopy - methods | Animals | Microscopy - instrumentation | Imaging, Three-Dimensional - methods | Specimen Handling - methods | Mice | Pathology - methods | Drosophila melanogaster | Optical Imaging - methods
Journal Article
Cold Spring Harbor Protocols, ISSN 1940-3402, 07/2013, Volume 8, Issue 7, pp. 683 - 684
Journal Article
Optics InfoBase Conference Papers, ISSN 1605-7422, 2017, Volume 2017
Conference Proceeding
Cold Spring Harbor Protocols, ISSN 1940-3402, 07/2013, Volume 8, Issue 7, pp. 681 - 682
Journal Article
Cold Spring Harbor Protocols, ISSN 1940-3402, 08/2013, Volume 2013, Issue 8, pp. 743 - 744
This protocol describes the preparation of mouse embryos for ultramicroscopy (UM), a powerful imaging technique that achieves precise and accurate... 
Microscopy - methods | Staining and Labeling - methods | Animals | Embryo, Mammalian - anatomy & histology | Specimen Handling - methods | Mice | Pathology - methods | Dehydration
Journal Article
Neurophotonics, ISSN 2329-423X, 10/2015, Volume 2, Issue 4, pp. 041407 - 041407
We present an overview of the ultramicroscopy technique we developed. Starting from developments 100 years ago, we designed a light sheet microscope and a... 
three-dimensional brain imaging | ultramicroscopy | brain clearing | objective correction | light sheet | tumor clearing | RECONSTRUCTION | RESOLUTION | 3-DIMENSIONAL VISUALIZATION | MICROSCOPY | NEUROSCIENCES | MICE | OPTICS | EXPRESSION | Special Section on Light Microscopy of Connectivity | Paper
Journal Article
Cold Spring Harbor protocols, 07/2013, Volume 2013, Issue 7, p. 683
This protocol describes the preparation of whole mouse brains and dissected hippocampi for ultramicroscopy (UM), a powerful imaging technique that achieves... 
Microscopy - methods | Brain - cytology | Animals | Brain - anatomy & histology | Lasers | Benzoates - metabolism | Imaging, Three-Dimensional - methods | Specimen Handling - methods | Mice | Dehydration | Benzyl Alcohol - metabolism
Journal Article
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