American Journal of Botany, ISSN 0002-9122, 07/2016, Volume 103, Issue 7, p. 1167
How did plant species emerge from their most recent common ancestors (MRCAs) 250 million years ago? Modern plant genomes help to address such key questions...
Polyploidy | Genomics | Evolution | Genomes | Grasses | Chromosomes
Polyploidy | Genomics | Evolution | Genomes | Grasses | Chromosomes
Journal Article
Nature Genetics, ISSN 1061-4036, 06/2018, Volume 50, Issue 6, pp. 772 - 777
Roses have high cultural and economic importance as ornamental plants and in the perfume industry. We report the rose whole-genome sequencing and assembly and...
SCENT COMPOUNDS | READ ALIGNMENT | PROTEIN | BIOSYNTHESIS | ANNOTATION | GENETICS & HEREDITY | WIDE PREDICTION | ARABIDOPSIS | IDENTIFICATION | TRANSCRIPTION FACTOR | FLOWERING TIME | Genomes | Analysis | Genes | Genomics | Plant genetics | Hybrids | Economic importance | Domestication | Hybridization | Multivariate analysis | Gene expression | Metabolism | Gene sequencing | Plant diversity | Ornamental plants | Vigor | Flowers & plants | Bioinformatics | Genotypes | Life Sciences | Plants genetics | Genetics | Environmental Sciences
SCENT COMPOUNDS | READ ALIGNMENT | PROTEIN | BIOSYNTHESIS | ANNOTATION | GENETICS & HEREDITY | WIDE PREDICTION | ARABIDOPSIS | IDENTIFICATION | TRANSCRIPTION FACTOR | FLOWERING TIME | Genomes | Analysis | Genes | Genomics | Plant genetics | Hybrids | Economic importance | Domestication | Hybridization | Multivariate analysis | Gene expression | Metabolism | Gene sequencing | Plant diversity | Ornamental plants | Vigor | Flowers & plants | Bioinformatics | Genotypes | Life Sciences | Plants genetics | Genetics | Environmental Sciences
Journal Article
Nature, ISSN 0028-0836, 06/2017, Volume 546, Issue 7656, pp. 148 - 152
The domesticated sunflower, Helianthus annuus L., is a global oil crop that has promise for climate change adaptation, because it can maintain stable yields...
PHOSPHATIDATE PHOSPHATASE | WILD | ACID | CULTIVATED SUNFLOWER | ANNOTATION | MULTIDISCIPLINARY SCIENCES | SEQUENCE | GENES | HELIANTHUS-ANNUUS | DOMESTICATION | ASTERACEAE | Genome, Plant - genetics | Stress, Physiological - genetics | Genomics | Helianthus - metabolism | Transcriptome - genetics | Sequence Analysis, DNA | Genetic Variation | Sunflower Oil | Gene Expression Regulation, Plant | Plant Oils - metabolism | Gene Duplication - genetics | Flowers - physiology | Acclimatization - genetics | Helianthus - classification | Flowers - genetics | Evolution, Molecular | Helianthus - genetics | Genetic aspects | Gene expression | Observations | Sunflowers | Networks | Climate | Oil and gas exploration | Transcription | Research programs | Genes | Genomes | Gene sequencing | Mining | Botany | Evolution | Genetics | Flowering | Flowers & plants | Assembly | Adaptation | Duplicating milling machines | Reconstruction | Stresses | Architecture | Breeding | Crops | Organs | Genetic diversity | Metabolism | Real time | Stress | Environmental conditions | Resilience | Quantitative genetics | Climate change | Oil | Plant breeding | Oils & fats | Compatibility | Life Sciences | Vegetal Biology
PHOSPHATIDATE PHOSPHATASE | WILD | ACID | CULTIVATED SUNFLOWER | ANNOTATION | MULTIDISCIPLINARY SCIENCES | SEQUENCE | GENES | HELIANTHUS-ANNUUS | DOMESTICATION | ASTERACEAE | Genome, Plant - genetics | Stress, Physiological - genetics | Genomics | Helianthus - metabolism | Transcriptome - genetics | Sequence Analysis, DNA | Genetic Variation | Sunflower Oil | Gene Expression Regulation, Plant | Plant Oils - metabolism | Gene Duplication - genetics | Flowers - physiology | Acclimatization - genetics | Helianthus - classification | Flowers - genetics | Evolution, Molecular | Helianthus - genetics | Genetic aspects | Gene expression | Observations | Sunflowers | Networks | Climate | Oil and gas exploration | Transcription | Research programs | Genes | Genomes | Gene sequencing | Mining | Botany | Evolution | Genetics | Flowering | Flowers & plants | Assembly | Adaptation | Duplicating milling machines | Reconstruction | Stresses | Architecture | Breeding | Crops | Organs | Genetic diversity | Metabolism | Real time | Stress | Environmental conditions | Resilience | Quantitative genetics | Climate change | Oil | Plant breeding | Oils & fats | Compatibility | Life Sciences | Vegetal Biology
Journal Article
Nature Plants, ISSN 2055-026X, 07/2018, Volume 4, Issue 7, pp. 440 - 452
Oaks are an important part of our natural and cultural heritage. Not only are they ubiquitous in our most common landscapes' but they have also supplied human...
GENETIC DIVERSITY | QUANTITATIVE TRAIT LOCI | PLANT | READ ALIGNMENT | BUD BURST | ANNOTATION | FAMILIES | SEQUENCE | DE-NOVO IDENTIFICATION | RESISTANCE GENE | PLANT SCIENCES | Biological Evolution | Genome, Plant - genetics | Genetic Variation - genetics | Quercus - genetics | Longevity - genetics | Mutation | Phylogeny | Sequence Analysis, DNA | DNA, Plant - genetics | Trees | Heterogeneity | Life span | Stem cells | Cultural heritage | Genomes | Longevity | Accumulation | Life Sciences | Genetik | Biological Sciences | Naturvetenskap | Biologiska vetenskaper | Evolutionsbiologi | Genetics | Natural Sciences | Evolutionary Biology
GENETIC DIVERSITY | QUANTITATIVE TRAIT LOCI | PLANT | READ ALIGNMENT | BUD BURST | ANNOTATION | FAMILIES | SEQUENCE | DE-NOVO IDENTIFICATION | RESISTANCE GENE | PLANT SCIENCES | Biological Evolution | Genome, Plant - genetics | Genetic Variation - genetics | Quercus - genetics | Longevity - genetics | Mutation | Phylogeny | Sequence Analysis, DNA | DNA, Plant - genetics | Trees | Heterogeneity | Life span | Stem cells | Cultural heritage | Genomes | Longevity | Accumulation | Life Sciences | Genetik | Biological Sciences | Naturvetenskap | Biologiska vetenskaper | Evolutionsbiologi | Genetics | Natural Sciences | Evolutionary Biology
Journal Article
Current Opinion in Plant Biology, ISSN 1369-5266, 04/2016, Volume 30, pp. 134 - 142
Most Recent Common Ancestor (MRCA) of crops. The triticeae, maize, sorghum, rice, setaria and chromosomes are represented as concentric circles according to...
DUPLICATIONS | EVOLUTION | GENOME PROVIDES INSIGHT | DRAFT GENOME | SEQUENCE | KARYOTYPE | DIVERGENCE | HOMOLOGY | REVEALS | TOOL | PLANT SCIENCES | Biological Evolution | Crops, Agricultural - classification | Genome, Plant - genetics | Computational Biology | Crops, Agricultural - genetics | Magnoliopsida - genetics | Genomics - methods | Magnoliopsida - classification | Agricultural industry | Chromosomes | Life Sciences
DUPLICATIONS | EVOLUTION | GENOME PROVIDES INSIGHT | DRAFT GENOME | SEQUENCE | KARYOTYPE | DIVERGENCE | HOMOLOGY | REVEALS | TOOL | PLANT SCIENCES | Biological Evolution | Crops, Agricultural - classification | Genome, Plant - genetics | Computational Biology | Crops, Agricultural - genetics | Magnoliopsida - genetics | Genomics - methods | Magnoliopsida - classification | Agricultural industry | Chromosomes | Life Sciences
Journal Article
Genome Biology, ISSN 1474-7596, 08/2018, Volume 19, Issue 1, pp. 111 - 911
The Wheat@URGI portal has been developed to provide the international community of researchers and breeders with access to the bread wheat reference genome...
Wheat genomics, genetics and phenomics | Big data | Information system | Data integration | PLANT | Wheat genomics | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | INFORMATION | GENETICS & HEREDITY | genetics and phenomics | RESOURCE | Triticum - genetics | Phenotype | Reference Standards | Genes, Plant | Base Sequence | Gene Expression Regulation, Plant | Data Mining | Genome, Plant | Sequence Analysis, DNA | Bread | Consortia | Annotations | Nucleotide sequence | Working groups | Genomics | Genomes | Goat grass | Research | Gene expression | Data bases | Interoperability | Information systems | Life Sciences
Wheat genomics, genetics and phenomics | Big data | Information system | Data integration | PLANT | Wheat genomics | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | INFORMATION | GENETICS & HEREDITY | genetics and phenomics | RESOURCE | Triticum - genetics | Phenotype | Reference Standards | Genes, Plant | Base Sequence | Gene Expression Regulation, Plant | Data Mining | Genome, Plant | Sequence Analysis, DNA | Bread | Consortia | Annotations | Nucleotide sequence | Working groups | Genomics | Genomes | Goat grass | Research | Gene expression | Data bases | Interoperability | Information systems | Life Sciences
Journal Article
Nature Genetics, ISSN 1061-4036, 03/2017, Volume 49, Issue 4, pp. 490 - 496
We describe here the reconstruction of the genome of the most recent common ancestor (MRCA) of modern monocots and eudicots, accounting for 95% of extant...
ORIGIN | WHOLE-GENOME | DIVERSIFICATION | GENETICS & HEREDITY | ANGIOSPERMS | CONSEQUENCES | GENE LOSS | ANCIENT | EVOLUTIONARY PLASTICITY | POLYPLOIDY | DIVERGENCE TIMES | Genome, Plant - genetics | Genomics | Magnoliopsida - genetics | Phylogeny | Mutation - genetics | Flowers - genetics | Evolution, Molecular | Genotype | Genetic aspects | Nucleotide sequencing | Identification and classification | Angiosperms | Methods | DNA sequencing | Studies | Polyploidy | Genetic engineering | Genomes | Genes | Success | Life Sciences
ORIGIN | WHOLE-GENOME | DIVERSIFICATION | GENETICS & HEREDITY | ANGIOSPERMS | CONSEQUENCES | GENE LOSS | ANCIENT | EVOLUTIONARY PLASTICITY | POLYPLOIDY | DIVERGENCE TIMES | Genome, Plant - genetics | Genomics | Magnoliopsida - genetics | Phylogeny | Mutation - genetics | Flowers - genetics | Evolution, Molecular | Genotype | Genetic aspects | Nucleotide sequencing | Identification and classification | Angiosperms | Methods | DNA sequencing | Studies | Polyploidy | Genetic engineering | Genomes | Genes | Success | Life Sciences
Journal Article
American Journal of Botany, ISSN 0002-9122, 07/2016, Volume 103, Issue 7, pp. 1167 - 1174
How did plant species emerge from their most recent common ancestors (MRCAs) 250 million years ago? Modern plant genomes help to address such key questions in...
Poaceae | grasses | paleogenomics | plant evolution | Plant evolution | Grasses | Paleogenomics | UNVEILS | FRACTIONATION | RECONSTRUCTION | WHOLE-GENOME DUPLICATIONS | MECHANISMS | PLANT SCIENCES | DOMINANCE | GENE-EXPRESSION | CONSEQUENCES | RICE | PLASTICITY | Biological Evolution | Polyploidy | Poaceae - genetics | Genome, Plant - genetics | Genomics | Karyotype | Evolution | Research | Plants | Life Sciences
Poaceae | grasses | paleogenomics | plant evolution | Plant evolution | Grasses | Paleogenomics | UNVEILS | FRACTIONATION | RECONSTRUCTION | WHOLE-GENOME DUPLICATIONS | MECHANISMS | PLANT SCIENCES | DOMINANCE | GENE-EXPRESSION | CONSEQUENCES | RICE | PLASTICITY | Biological Evolution | Polyploidy | Poaceae - genetics | Genome, Plant - genetics | Genomics | Karyotype | Evolution | Research | Plants | Life Sciences
Journal Article
Current Opinion in Plant Biology, ISSN 1369-5266, 04/2012, Volume 15, Issue 2, pp. 122 - 130
► Plants derive from ancestors of 5/7 protochromosomes with 10000 protogenes and 50 MB in size. ► Modern diploid plant species are paleopolyploids that went...
ARABIDOPSIS-THALIANA | DUPLICATIONS | GENE | GRASSES | RECONSTRUCTION | SEQUENCE | POLYPLOIDY | COMPARISONS REVEAL | MAP | RICE | PLANT SCIENCES | Genome, Plant - genetics | Genomics - methods | Archaeology - methods | Evolution, Molecular | Evolution | Plants | Laws, regulations and rules | Genomics | Plant genetics | Life Sciences | Agricultural sciences
ARABIDOPSIS-THALIANA | DUPLICATIONS | GENE | GRASSES | RECONSTRUCTION | SEQUENCE | POLYPLOIDY | COMPARISONS REVEAL | MAP | RICE | PLANT SCIENCES | Genome, Plant - genetics | Genomics - methods | Archaeology - methods | Evolution, Molecular | Evolution | Plants | Laws, regulations and rules | Genomics | Plant genetics | Life Sciences | Agricultural sciences
Journal Article
Molecular Ecology Resources, ISSN 1755-098X, 01/2016, Volume 16, Issue 1, pp. 254 - 265
The 1.5 Gbp/2C genome of pedunculate oak (Quercus robur) has been sequenced. A strategy was established for dealing with the challenges imposed by the...
genomic resources | Quercus robur | genome sequence | Genomic resources | Genome sequence | BUD BURST | BIOCHEMISTRY & MOLECULAR BIOLOGY | CLIMATE-CHANGE | POPULATIONS | EUROPEAN OAK | QUANTITATIVE TRAIT LOCI | EVOLUTIONARY BIOLOGY | QUERCUS-ROBUR L | EVOLUTION | GENE-EXPRESSION | ECOLOGY | PEDUNCULATE OAK | SESSILE OAK | Quercus - classification | Molecular Sequence Annotation | Models, Genetic | Quercus - genetics | Genome, Plant | Phylogeny | Sequence Analysis, DNA | Proteins | Genomes | Analysis | Genomics | Life Sciences
genomic resources | Quercus robur | genome sequence | Genomic resources | Genome sequence | BUD BURST | BIOCHEMISTRY & MOLECULAR BIOLOGY | CLIMATE-CHANGE | POPULATIONS | EUROPEAN OAK | QUANTITATIVE TRAIT LOCI | EVOLUTIONARY BIOLOGY | QUERCUS-ROBUR L | EVOLUTION | GENE-EXPRESSION | ECOLOGY | PEDUNCULATE OAK | SESSILE OAK | Quercus - classification | Molecular Sequence Annotation | Models, Genetic | Quercus - genetics | Genome, Plant | Phylogeny | Sequence Analysis, DNA | Proteins | Genomes | Analysis | Genomics | Life Sciences
Journal Article