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Biophysical journal, ISSN 0006-3495, 2015, Volume 108, Issue 3, pp. 457 - 461
ReaDDy is a modular particle simulation package combining off-lattice reaction kinetics with arbitrary particle interaction forces. Here we present a graphical... 
SPACE | DYNAMICS | TIME | BIOPHYSICS | Computer Graphics | Software | Kinetics | Time Factors | Diffusion | Computer Simulation | Chemical reaction, Rate of | Cellular signal transduction | Computational Tools
Journal Article
Science (American Association for the Advancement of Science), ISSN 1095-9203, 2018, Volume 362, Issue 6421, pp. 1423 - 1428
Journal Article
BMC biophysics, ISSN 2046-1682, 2014, Volume 7, Issue 1, pp. 11 - 11
Particle-based reaction-diffusion algorithms facilitate the modeling of the diffusional motion of individual molecules and the reactions between them in... 
Confinement | Particle simulation | Brownian dynamics | Excluded volume | Crowding | Reaction-diffusion | LIGAND-BINDING | BIOLOGICAL INTERPRETATION | MONTE-CARLO | CHEMICAL-REACTIONS | MOLECULAR SIMULATION | BIOPHYSICS | STOCHASTIC SIMULATION | REACTION-KINETICS | PROTEIN-PROTEIN INTERACTIONS | SECRETORY GRANULES | LATERAL DIFFUSION
Journal Article
Nature communications, ISSN 2041-1723, 2018, Volume 9, Issue 1, pp. 1073 - 1
... T. Abualrous1, Hao Wu1, Michael D. Crabtree 3, Johannes Schöneberg1, Jane Clarke3, Christian Freund4, Thomas R. Weikl2 & Frank Noé 1 Correction to: Nature Communications... 
Error correction | Kinetics
Journal Article
Nature reviews. Molecular cell biology, ISSN 1471-0072, 1/2017, Volume 18, Issue 1, pp. 5 - 17
The narrow membrane necks formed during viral, exosomal, and intra-endosomal budding from membranes, cytokinesis, and related processes have interiors that are... 
Journal Article
Nature Communications, ISSN 2041-1723, 12/2017, Volume 8, Issue 1, pp. 1 - 10
..., Hao Wu1, Michael D. Crabtree 3, Johannes Schöneberg1, Jane Clarke3, Christian Freund4, Thomas R. Weikl2 & Frank Noé 1 Understanding and control of structures... 
DISTRIBUTIONS | ACCELERATED MOLECULAR-DYNAMICS | MULTIDISCIPLINARY SCIENCES | MDM2 | FORCE-FIELD | DISORDERED PROTEINS | FREE-ENERGIES | P53 PATHWAY | BINDING | TARGET RESIDENCE TIME | BIOMOLECULAR DYNAMICS | Binding | Peptides | Computer simulation | Molecular dynamics | Markov chains | Time | Hydrophobicity | Drug development | Proteins | Mutagenesis | Computer applications | Reaction kinetics | Kinetics
Journal Article