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1. Full Text Quantitation in mass-spectrometry-based proteomics
by Schulze, Waltraud X and Usadel, Börn
Annual review of plant biology, ISSN 1543-5008, 06/2010, Volume 61, Issue 1, pp. 491 - 516
Statistical anaylsis | Reciprocal labeling | Stable isotope labeling | Label-free quantitation | Mass spectrometry | Proteomics | Plant Proteins - analysis | Plants - chemistry | Proteomics - methods | Mass Spectrometry | Isotopes | Analysis | Proteins | Plant biology | Index Medicus
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2. Full Text The Arabidopsis Kinome: Phylogeny and evolutionary insights into functional diversification
by Zulawski, Monika and Schulze, Gunnar and Braginets, Rostyslav and Hartmann, Stefanie and Schulze, Waltraud X
BMC genomics, ISSN 1471-2164, 07/2014, Volume 15, Issue 1, pp. 548 - 548
Genetics & Heredity | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Arabidopsis - genetics | Gene Duplication | Arabidopsis Proteins - genetics | Multigene Family | Protein Kinases - genetics | Protein Kinases - classification | Protein Interaction Maps - genetics | Genome, Plant | Phylogeny | Arabidopsis Proteins - classification | Evolution, Molecular | Genetic research | Protein kinases | Analysis | Genomics | Cyclin-dependent kinases | Colleges & universities | Biology | Genomes | Kinases | Diversification | Gene expression | Retention | Proteins | Signal transduction | Phylogenetics | Evolution | Software | Chromosomes | Bioinformatics | Index Medicus
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3. Full Text Proteomics approaches to understand protein phosphorylation in pathway modulation
by Schulze, Waltraud X
Current opinion in plant biology, ISSN 1369-5266, 2010, Volume 13, Issue 3, pp. 279 - 286
Life Sciences & Biomedicine | Plant Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | Phosphorylation | Plants - metabolism | Signal Transduction | Mass Spectrometry | Proteomics | Plant Proteins - metabolism | Protein Processing, Post-Translational | Proteome - metabolism | Index Medicus
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4. Full Text Global Identification of Protein Complexes within the Membrane Proteome of Arabidopsis Roots Using a SEC-MS Approach
by Gilbert, Max and Schulze, Waltraud X
Journal of proteome research, ISSN 1535-3893, 01/2019, Volume 18, Issue 1, pp. 107 - 119
Arabidopsis thaliana | membrane proteins | protein mass spectrometry | size-exclusion chromatography | root | interactome | protein complex | Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Biochemical Research Methods | Science & Technology | Chromatography, Gel - methods | Arabidopsis - chemistry | Multiprotein Complexes - analysis | Plant Roots - chemistry | Arabidopsis Proteins - analysis | Proteome - analysis | Mass Spectrometry - methods | Membrane Proteins - analysis | Index Medicus
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5. Full Text Phosphotyrosine interactome of the ErbB-receptor kinase family
by Deng, Lei and Mann, Matthias and Schulze, Waltraud X
Molecular systems biology, ISSN 1744-4292, 05/2005, Volume 1, Issue 1, pp. 2005.0008 - n/a
Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Adaptor Proteins, Signal Transducing - chemistry | Phosphorylation | Phosphotyrosine - immunology | Immunoprecipitation | Humans | Receptor, ErbB-2 - chemistry | Molecular Sequence Data | STAT5 Transcription Factor - chemistry | Receptor, ErbB-3 - chemistry | Systems Biology | Phosphotyrosine - physiology | Binding Sites | Shc Signaling Adaptor Proteins | Protein Structure, Tertiary | Amino Acid Sequence | Phosphatidylinositol 3-Kinases - chemistry | GRB2 Adaptor Protein - chemistry | Phosphotyrosine - chemistry | Receptor, Epidermal Growth Factor - chemistry | Amino Acid Motifs | Protein Interaction Mapping | Peptide Fragments - chemical synthesis | Peptide Fragments - chemistry | Sequence Alignment | Src Homology 2 Domain-Containing, Transforming Protein 1 | Protein Binding | Signal Transduction - physiology | Protein Processing, Post-Translational | HeLa Cells | Receptor, ErbB-4 | Tumor Suppressor Proteins | Peptides | Phosphotyrosine | Mapping | Kinases | Experiments | Proteins | Signal transduction | Ratios | Synthetic peptides | Tyrosine | Epidermal growth factor receptors | ErbB protein | Mass spectroscopy | Stat5 protein | ErbB-3 protein | ErbB-2 protein | Peptide mapping | 1-Phosphatidylinositol 3-kinase | Grb2 protein | Domains | Signaling | Correlation analysis | Proteomics | Ligands | Scientific imaging | Protein interaction | Mass spectrometry | Binding sites | Methods | Index Medicus
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6. Full Text Proteome dynamics and early salt stress response of the photosynthetic organism Chlamydomonas reinhardtii
by Mastrobuoni, Guido and Irgang, Susann and Pietzke, Matthias and Aßmus, Heike E and Wenzel, Markus and Schulze, Waltraud X and Kempa, Stefan
BMC genomics, ISSN 1471-2164, 05/2012, Volume 13, Issue 1, pp. 215 - 215
Genetics & Heredity | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Gas Chromatography-Mass Spectrometry | Sodium Chloride - pharmacology | Ribulose-Bisphosphate Carboxylase - genetics | Half-Life | Proteome - drug effects | Arginine - chemistry | Chlamydomonas reinhardtii - drug effects | Plant Proteins - genetics | Ribulose-Bisphosphate Carboxylase - metabolism | Chlamydomonas reinhardtii - genetics | Metabolome - drug effects | Photosynthesis - genetics | Time Factors | Plant Proteins - chemistry | Isotope Labeling | Chlamydomonas reinhardtii - metabolism | Stress, Physiological - drug effects | Carbon Isotopes - chemistry | Proteome - metabolism | Arginine - metabolism | Proteins | Protein metabolism | Arginine | Metabolites | Plant physiology | Protein biosynthesis | Photosynthesis | Chlamydomonas | Medical research | Cell culture | Nuclear magnetic resonance--NMR | Data processing | Genomes | Experiments | Manuscripts | Studies | Protein synthesis | Proteomics | Stress response | Isotopes | Index Medicus
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7. Full Text Meta-Analysis of Arabidopsis thaliana Phospho-Proteomics Data Reveals Compartmentalization of Phosphorylation Motifs
by Klaas J. van Wijk and Giulia Friso and Dirk Walther and Waltraud X. Schulze
The Plant cell, ISSN 1040-4651, 6/2014, Volume 26, Issue 6, pp. 2367 - 2389
Datasets | Cell culture techniques | Phosphorylation | Mitochondria | Databases | Proteomics | Cell membranes | LARGE-SCALE BIOLOGY ARTICLE | Plastids | Plant cells | Seedlings | Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Plant Sciences | Science & Technology | Cell Biology | Arabidopsis thaliana | Plant proteins | Protein research | Botanical research | Physiological aspects | Research | Meta-analysis | Large-Scale Biology
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8. Full Text A Novel Proteomic Screen for Peptide-Protein Interactions
by Waltraud X. Schulze and Matthias Mann
The Journal of biological chemistry, ISSN 0021-9258, 03/2004, Volume 279, Issue 11, pp. 10756 - 10764
Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Humans | Phosphoproteins - chemistry | Endocytosis | Mass Spectrometry | Actins - chemistry | Carrier Proteins - chemistry | Proteomics - methods | Tyrosine - chemistry | Vesicular Transport Proteins | Protein Structure, Tertiary | Cell Line | Peptides - chemistry | Signal Transduction | Intracellular Signaling Peptides and Proteins | Blotting, Western | Precipitin Tests | Receptor, Epidermal Growth Factor - chemistry | Proline - chemistry | src Homology Domains | Point Mutation | Adaptor Proteins, Signal Transducing | GRB2 Adaptor Protein | Sorting Nexins | Models, Biological | Protein Binding | HeLa Cells | Proteins - chemistry | Index Medicus
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9. Full Text Feedback Inhibition of Ammonium Uptake by a Phospho-Dependent Allosteric Mechanism in Arabidopsis
by Viviane Lanquar and Dominique Loqué and Friederike Hörmann and Lixing Yuan and Anne Bohner and Wolfgang R. Engelsberger and Sylvie Lalonde and Waltraud X. Schulze and Nicolaus von Wirén and Wolf B. Frommer
The Plant cell, ISSN 1040-4651, 11/2009, Volume 21, Issue 11, pp. 3610 - 3622
Proteins | Phosphorylation | Quaternary ammonium compounds | Antiserum | Plant roots | Cell membranes | Plants | Nitrogen | Seedlings | Plant cells | Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Plant Sciences | Science & Technology | Cell Biology | Phosphotransferases - metabolism | Conserved Sequence - physiology | Plant Roots - metabolism | Autoreceptors - metabolism | Amino Acid Sequence - physiology | Threonine - metabolism | Protein Subunits - metabolism | Arabidopsis - metabolism | Arabidopsis - genetics | Allosteric Regulation - physiology | Time Factors | Cation Transport Proteins - metabolism | Phosphorus - metabolism | Plant Proteins - chemistry | Homeostasis - physiology | Quaternary Ammonium Compounds - metabolism | Plant Proteins - metabolism | Feedback, Physiological - physiology | Cation Transport Proteins - chemistry | Protein Structure, Tertiary - physiology | Arabidopsis thaliana | Ammonium chloride | Ammonium compounds | Ammonium paratungstate | Physiological aspects | Research | Glutamine | Index Medicus
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10. Full Text Rpl33, a Nonessential Plastid-Encoded Ribosomal Protein in Tobacco, Is Required under Cold Stress Conditions
by Marcelo Rogalski and Mark A. Schöttler and Wolfram Thiele and Waltraud X. Schulze and Ralph Bock
The Plant cell, ISSN 1040-4651, 8/2008, Volume 20, Issue 8, pp. 2221 - 2237
Leaves | Cooling | Ribosomal proteins | Chloroplasts | Ribosomes | Genomes | Plants | Plastids | Chlorophylls | Plant cells | Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Plant Sciences | Science & Technology | Cell Biology | Cold Temperature | Plants, Genetically Modified - genetics | Plants, Genetically Modified - growth & development | Plant Proteins - physiology | Ribosomal Proteins - genetics | Tobacco - metabolism | Molecular Sequence Data | Immunoblotting | Tobacco - growth & development | Ribosomal Proteins - metabolism | Plant Proteins - genetics | Plants, Genetically Modified - metabolism | Ribosomal Proteins - physiology | Gene Expression Regulation, Developmental | Tobacco - genetics | Gene Expression Regulation, Plant | Polymerase Chain Reaction | Plastids - genetics | Plastids - metabolism | Plant Proteins - metabolism | Proteins | Genetics | Tobacco industry | Index Medicus
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