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Journal of Statistical Software, ISSN 1548-7660, 2011, Volume 42, Issue 7, pp. 1 - 52
Matching is an R package which provides functions for multivariate and propensity score matching and for finding optimal covariate balance based on a genetic... 
Causal inference | Genetic optimization | Propensity score matching | Multivariate matching | DISTRIBUTIONS | propensity score matching | COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS | REDUCTION | ESTIMATORS | STATISTICS & PROBABILITY | ASSESSING PARTISAN BIAS | genetic optimization | causal inference | multivariate matching | TRAINING-PROGRAMS | DESIGNS
Journal Article
by Chapman, S. J and Glasbey, J and Kelly, M and Khatri, C and Nepogodiev, D and Fitzgerald, J. E. F and Bhangu, A and Bhangu, A and Harrison, E. M and Adams, R and Patel, K and Khatri, C and Retchless, A. R and Elsaddig, M and Curtis, A. E and Nepogodiev, D and Glasbey, J and McMahon, R and Mittapalli, D and Ferguson, L. A and Gentry, S. V and Kong, C. Y. N and Naqvi, Z and Amin, H and Chapman, S. J and Kelly, M and Chaudhry, B and Burke, J and Henderson, I and Trecarten, S and Clements, J. M and Drake, T. M and Wild, J. R. L and Venkatesh, H and Butters, N and Ahmeidat, H and Goergen, N and Adams, R and Black, D and Robertson, K and Jama, G. M and McGuire, S. A and Ahl, R and Suri, T. S and Kuo, R and Fadhlillah, M and Mills, H and Mitchell, R and Goodship, J and Tan, M and Barker, T and Wright, T and Mohamad, W and Hanna, N and Laing, G and Warnock, M. W. C and Baird‐Fraser, P. R and Logan, T and Young, F. M and Fane De Salis, A. C and McHugh, R and Drake, T. M and Hickson, C and Paszkiewicz, J and Anderson, L. B and Neeson, D and Mohan, M and Narang, Y and Brophy, T and Punj, R and Majumdar, S and Kauser, S and Jong, G and Palkhi, E and Finch, D and Curtis, A. E and Mitchell, H and Carter, N and Viyasar, T and Sammut, T and Cook, N and Powell, M. M and Horne, S and Allen, J. L. Y and Marshall, D and McIntyre, C and S Koh, D. T and Shi, J and Reid, T and Armugam, N. P and Luck, J and Fozard, T and O'Callaghan, J and Copley, P. C and Tilliriou, V and Aiyer, R and Yazdi, A and Wiltshire, A and Blower, E and Jewitt, C and ... and STARSurg Collaborative
British Journal of Surgery, ISSN 0007-1323, 10/2014, Volume 101, Issue 11, pp. 1413 - 1423
Journal Article
Journal of Statistical Software, ISSN 1548-7660, 2011, Volume 42, Issue 11, pp. 1 - 26
genoud is an R function that combines evolutionary algorithm methods with a derivative-based (quasi-Newton) method to solve difficult optimization problems.... 
Parallel computing | Genetic algorithm | Optimization | Evolutionary program | genetic algorithm | COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS | optimization | evolutionary program | STATISTICS & PROBABILITY | NONLINEAR SOLVER | parallel computing
Journal Article
by Collisson, EA and Campbell, JD and Brooks, AN and Berger, AH and Lee, W and Chmielecki, J and Beer, DG and Cope, L and Creighton, CJ and Danilova, L and Ding, L and Getz, G and Hammerman, PS and Hayes, DN and Hernandez, B and Herman, JG and Heymach, JV and Jurisica, I and Kucherlapati, R and Kwiatkowski, D and Ladanyi, M and Robertson, G and Schultz, N and Shen, RL and Sinha, R and Sougnez, C and Tsao, MS and Travis, WD and Weinstein, JN and Wigle, DA and Wilkerson, MD and Chu, AD and Cherniack, AD and Hadjipanayis, A and Rosenberg, M and Weisenberger, DJ and Laird, PW and Radenbaugh, A and Ma, SG and Stuart, JM and Byers, LA and Baylin, SB and Govindan, R and Meyerson, M and Gabriel, SB and Cibulskis, K and Kim, J and Stewart, C and Lichtenstein, L and Lander, ES and Lawrence, MS and Getz and Kandoth, C and Fulton, R and Fulton, LL and McLellan, MD and Wilson, RK and Ye, K and Fronick, CC and Maher, CA and Miller, CA and Wendl, MC and Cabanski, C and Mardis, E and Wheeler, D and Balasundaram, M and Butterfield, YSN and Carlsen, R and Chuah, E and Dhalla, N and Guin, R and Hirst, C and Lee, D and Li, HYI and Mayo, M and Moore, RA and Mungall, AJ and Schein, JE and Sipahimalani, P and Tam, A and Varhol, R and Robertson, AG and Wye, N and Thiessen, N and Holt, RA and Jones, SJM and Marra, MA and Imielinski, M and Onofrio, RC and Hodis, E and Zack, T and Helman, E and Pedamallu, CS and Mesirov, J and Saksena, G and Schumacher, SE and Carter, SL and Garraway, L and Beroukhim, R and Lee, S and ... and Canc Genome Atlas Res Network and Cancer Genome Atlas Research Network and The Cancer Genome Atlas Research Network
NATURE, ISSN 0028-0836, 07/2014, Volume 511, Issue 7511, pp. 543 - 550
Journal Article
by Wu, Yige and Ritter, Deborah I and Wang, Jiayin and Paczkowska, Marta and Reynolds, Sheila and Wyczalkowski, Matthew A and Oak, Ninad and Scott, Adam D and Krassowski, Michal and Cherniack, Andrew D and Houlahan, Kathleen E and Jayasinghe, Reyka and McMichael, Joshua F and Hucthagowder, Vishwanathan and Hahn, Abigail and McLellan, Michael D and Al-Mulla, Fahd and Johnson, Kimberly J and Caesar-Johnson, Samantha J and Demchok, John A and Felau, Ina and Kasapi, Melpomeni and Ferguson, Martin L and Hutter, Carolyn M and Sofia, Heidi J and Yang, Liming and Zenklusen, Jean C and Zhang, Jiashan (Julia) and Chudamani, Sudha and Liu, Jia and Lolla, Laxmi and Wan, Yunhu and Cho, Juok and Frazer, Scott and Gehlenborg, Nils and Getz, Gad and Lawrence, Michael S and Lin, Pei and Meier, Sam and Noble, Michael S and Bernard, Brady and Chambwe, Nyasha and Knijnenburg, Theo and Kramer, Roger and Liu, Yuexin and Miller, Michael and Reynolds, Sheila and Akbani, Rehan and Broom, Bradley M and Ju, Zhenlin and Kanchi, Rupa S and Liang, Han and Liu, Wenbin and Mills, Gordon B and Ng, Kwok-Shing and Rao, Arvind and Wang, Jing and Weinstein, John N and Abeshouse, Adam and de Bruijn, Ino and Heins, Zachary J and Kundra, Ritika and Luna, Augustin and Nissan, Moriah G and Ochoa, Angelica and Phillips, Sarah M and Sander, Chris and Sumer, S. Onur and Sun, Yichao and Taylor, Barry S and Zhang, Hongxin and Benz, Christopher and Stuart, Joshua M and Yau, Christina and Parker, Joel S and Balasundaram, Miruna and Bowlby, Reanne and Carlsen, Rebecca and Chuah, Eric and Dhalla, Noreen and Holt, Robert and Jones, Steven J.M and Kasaian, Katayoon and Lee, Darlene and Ma, Yussanne and Marra, Marco A and Mayo, Michael and Moore, Richard A and Sipahimalani, Payal and Tam, Angela and Thiessen, Nina and Berger, Ashton C and Beroukhim, Rameen and Cibulskis, Carrie and Gabriel, Stacey B and Gao, Galen F and Schumacher, Steven E and Kucherlapati, Melanie H and Kucherlapati, Raju S and Baylin, Stephen and ... and The Cancer Genome Atlas Research Network and Canc Genome Atlas Res Network and Cancer Genome Atlas Research Network
Cell, ISSN 0092-8674, 04/2018, Volume 173, Issue 2, pp. 355 - 370.e14
Journal Article
by Berger, Ashton C and Korkut, Anil and Kanchi, Rupa S and Hegde, Apurva M and Liu, Yuexin and Fan, Huihui and Shen, Hui and Ravikumar, Visweswaran and Rao, Arvind and Schultz, Andre and Sumazin, Pavel and Mestdagh, Pieter and Gunaratne, Preethi H and Bowlby, Reanne and Tiezzi, Daniel G and Wang, Chen and Godwin, Andrew K and Kuderer, Nicole M and Rader, Janet S and Zuna, Rosemary E and Adebamowo, Clement and Adebamowo, Sally N and Chen, Ting-Wen and Chiu, Hua-Sheng and Lefever, Steve and Liu, Liang and MacKenzie, Karen and Orsulic, Sandra and Roszik, Jason and Shelley, Carl Simon and Vellano, Christopher P and Wentzensen, Nicolas and Demchok, John A and Felau, Ina and Kasapi, Melpomeni and Hutter, Carolyn M and Yang, Liming and Zhang, Jiashan (Julia) and Chudamani, Sudha and Sun, Qiang and Wan, Yunhu and Wu, Ye and Cho, Juok and DeFreitas, Timothy and Frazer, Scott and Gehlenborg, Nils and Heiman, David I and Noble, Michael S and Voet, Doug and Zhang, Hailei and Chambwe, Nyasha and Dhankani, Varsha and Knijnenburg, Theo and Kramer, Roger and Leinonen, Kalle and Liu, Yuexin and Miller, Michael and Reynolds, Sheila and Shmulevich, Ilya and Thorsson, Vesteinn and Zhang, Wei and Akbani, Rehan and Hegde, Apurva M and Kanchi, Rupa S and Korkut, Anil and Li, Jun and Liang, Han and Ling, Shiyun and Liu, Wenbin and Lu, Yiling and Mills, Gordon B and Ng, Kwok-Shing and Wang, Jing and Weinstein, John N and Zhang, Jiexin and Abeshouse, Adam and Chakravarty, Debyani and Chatila, Walid K and de Bruijn, Ino and Gao, Jianjiong and Gross, Benjamin E and Ladanyi, Marc and Luna, Augustin and Nissan, Moriah G and Ochoa, Angelica and Reznik, Ed and Sanchez-Vega, Francisco and Sander, Chris and Schultz, Nikolaus and Sheridan, Robert and Sumer, S. Onur and Sun, Yichao and Taylor, Barry S and Zhang, Hongxin and Anur, Pavana and Peto, Myron and Spellman, Paul and Stuart, Joshua M and Wong, Christopher K and Yau, Christina and ... and The Cancer Genome Atlas Research Network and Canc Genome Atlas Res Network and Cancer Genome Atlas Research Network and Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS) and Proteomik och nanobioteknologi and Cellulär och klinisk proteomik and Skolan för bioteknologi (BIO) and Proteinvetenskap and KTH and Skolan för kemi, bioteknologi och hälsa (CBH)
Cancer Cell, ISSN 1535-6108, 04/2018, Volume 33, Issue 4, pp. 690 - 705.e9
Journal Article
Journal of Hepatology, ISSN 0168-8278, 2007, Volume 46, Issue 5, pp. 849 - 857
Journal Article
by McPherson, John D and Marra, Marco and Hillier, LaDeana and Waterston, Robert H and Chinwalla, Asif and Wallis, John and Sekhon, Mandeep and Wylie, Kristine and Mardis, Elaine R and Wilson, Richard K and Fulton, Robert and Kucaba, Tamara A and Wagner-McPherson, Caryn and Barbazuk, William B and Gregory, Simon G and Humphray, Sean J and French, Lisa and Evans, Richard S and Bethel, Graeme and Whittaker, Adam and Holden, Jane L and McCann, Owen T and Dunham, Andrew and Soderlund, Carol and Scott, Carol E and Bentley, David R and Schuler, Gregory and Chen, Hsiu-Chuan and Jang, Wonhee and Green, Eric D and Idol, Jacquelyn R and Maduro, Valerie V. Braden and Montgomery, Kate T and Lee, Eunice and Miller, Ashley and Emerling, Suzanne and Kucherlapati, Raju and Gibbs, Richard and Scherer, Steve and Gorrell, J. Harley and Sodergren, Erica and Clerc-Blankenburg, Kerstin and Tabor, Paul and Naylor, Susan and Garcia, Dawn and de Jong, J and Catanese, Joseph J and Nowak, Norma and Osoegawa, Kazutoyo and Qin, Shizhen and Rowen, Lee and Madan, Anuradha and Dors, Monica and Hood, Leroy and Trask, Barbara and Friedman, Cynthia and Massa, Hillary and Cheung, Vivian G and Kirsch, Ilan R and Reid, Thomas and Yonescu, Raluca and Weissenbach, Jean and Bruls, Thomas and Heilig, Roland and Branscomb, Elbert and Olsen, Anne and Doggett, Norman and Cheng, Jan-Fang and Hawkins, Trevor and Myers, Richard M and Shang, Jin and Ramirez, Lucia and Schmutz, Jeremy and Velasquez, Olivia and Dixon, Kami and Stone, Nancy E and Cox, David R and Haussler, David and Kent, W. James and Furey, Terrence and Rogic, Sanja and Kennedy, Scot and Jones, Steven and Rosenthal, André and Wen, Gaiping and Schilhabel, Markus and Gloeckner, Gernot and Nyakatura, Gerald and Siebert, Reiner and Schlegelberger, Brigitte and Korenberg, Julie and Chen, Xiao-Ning and Fujiyama, Asao and Hattori, Masahira and Toyoda, Atsushi and Yada, Tetsushi and Park, Hong-Seok and Sakaki, Yoshiyuki and Shimizu, Nobuyoshi and Asakawa, Shuichi and ... and Int Human Genome Mapping Consortiu and International Human Genome Mapping Consortium and The International Human Genome Mapping Consortium
Nature, ISSN 0028-0836, 02/2001, Volume 409, Issue 6822, pp. 934 - 941
The human genome is by far the largest genome to be sequenced, and its size and complexity present many challenges for sequence assembly. The International... 
CHROMOSOME | CONTIGS | FRAGMENTS | SHOTGUN | DROSOPHILA-MELANOGASTER | DNA-SEQUENCE | MULTIDISCIPLINARY SCIENCES | GENES | HYBRIDIZATION | CLONES | VECTOR | Gene Duplication | DNA Fingerprinting | Humans | Chromosomes, Artificial, Bacterial | Cloning, Molecular | Repetitive Sequences, Nucleic Acid | In Situ Hybridization, Fluorescence | Contig Mapping | Genome, Human | DNA fingerprints | Genomics | Cloning | Genes
Journal Article