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1. Pregnancy-related gastrointestinal & hepatological diseases and complications
by Shanahan, Fergus
2007, Best practice & research. Clinical gastroenterology, Volume 21, no. 5., 753-917
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2. Full Text Friendship in Medicine - The Corrigan Club considers its demise
by Shanahan, Fergus
QJM : monthly journal of the Association of Physicians, ISSN 1460-2725, 07/2019
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3. Full Text Crohn's disease
by Shanahan, Fergus
The Lancet, ISSN 0140-6736, 01/2002, Volume 359, Issue 9300, pp. 62 - 69
Crohn's disease is a disorder mediated by Tlymphocyteswhich arises in genetically susceptible individuals as a result of a breakdown in the regulatory... 
INTESTINAL INFLAMMATION | MATRIX METALLOPROTEINASES | MEDICINE, GENERAL & INTERNAL | INFLAMMATORY-BOWEL-DISEASE | EXPERIMENTAL COLITIS | FLORA | ESCHERICHIA-COLI | ANIMAL-MODELS | FECAL STREAM | HUMAN GUT | T-CELLS | Proteins - genetics | Crohn Disease - genetics | Genetic Predisposition to Disease | Animals | Intestines - microbiology | Humans | Intracellular Signaling Peptides and Proteins | Crohn Disease - microbiology | Nod2 Signaling Adaptor Protein | Crohn Disease - immunology | Intestines - immunology | Carrier Proteins | Crohn's disease | Research | Genetics | Bowel disease | Pathogens | Antigens | Mucosal immunity | Immune response | Cytokines | Pathogenesis | Genes | Genomes | Inflammation | Investigations | Crohns disease | Inflammatory bowel disease | Genotype & phenotype | Flora | Measles | Tumor necrosis factor-TNF | Genetic engineering | Colon
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4. Full Text The gut microbiota-a clinical perspective on lessons learned
by Shanahan, F
NATURE REVIEWS GASTROENTEROLOGY & HEPATOLOGY, ISSN 1759-5045, 10/2012, Volume 9, Issue 10, pp. 609 - 614
Once considered obscure and largely ignored by microbiologists, the human microbiota has moved centre-stage in biology. The gut microbiota is now a focus of... 
COMMENSAL | OBESITY | RECOGNITION | METABOLISM | MICE | HEALTH | MEDICINE | GASTROENTEROLOGY & HEPATOLOGY | INFLAMMATORY BOWEL DISEASES | CLOSTRIDIUM-DIFFICILE | LIFE | Metabolomics | Life Style | Diet | Humans | Risk Factors | Gastrointestinal Tract - microbiology | Gastrointestinal Tract - metabolism | Metagenome - physiology | Host-bacteria relationships | Molecular microbiology | Research | Microbiota (Symbiotic organisms) | Health aspects
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5. Full Text The microbiota in inflammatory bowel disease
by Sheehan, Donal and Moran, Carthage and Shanahan, Fergus
Journal of Gastroenterology, ISSN 0944-1174, 5/2015, Volume 50, Issue 5, pp. 495 - 507
This review explores our current understanding of the complex interaction between environmental risk factors, genetic traits and the development of... 
Inflammatory bowel disease | Gut microbiota | Medicine & Public Health | Mycobiome | Colorectal Surgery | Virome | Hepatology | Gastroenterology | Abdominal Surgery | Faecal microbial transplantation | Surgical Oncology | CLOSTRIDIUM-DIFFICILE INFECTION | SMOKING-CESSATION | CROHNS-DISEASE | INTESTINAL MICROBIOTA | ULCERATIVE-COLITIS | CLINICAL CHARACTERISTICS | CHAIN FATTY-ACIDS | BODY-MASS INDEX | GASTROENTEROLOGY & HEPATOLOGY | GENOME-WIDE ASSOCIATION | Body Mass Index | Genetic Predisposition to Disease | Life Style | Prevalence | Global Health | Humans | Risk Factors | Gastrointestinal Microbiome | Treatment Outcome | Evidence-Based Medicine | Incidence | Anti-Bacterial Agents - therapeutic use | Inflammatory Bowel Diseases - epidemiology | Microbiota | Inflammatory Bowel Diseases - genetics | Fecal Microbiota Transplantation - methods | Inflammatory Bowel Diseases - microbiology | Probiotics - therapeutic use | Inflammatory Bowel Diseases - therapy | Microbiota (Symbiotic organisms) | Development and progression | Gastrointestinal diseases
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6. Full Text Skin contact, skin radiant
by Shanahan, Fergus
Lancet, The, ISSN 0140-6736, 2013, Volume 381, Issue 9873, pp. 1173 - 1173
To link to full-text access for this article, visit this link: http://dx.doi.org/10.1016/S0140-6736(13)60785-0 Byline: Fergus Shanahan 
Internal Medicine | Skin | Art exhibits | Skin diseases | Painting
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7. Full Text Probiotics in Perspective
by Shanahan, Fergus
Gastroenterology, ISSN 0016-5085, 2010, Volume 139, Issue 6, pp. 1808 - 1812
Gastroenterology and Hepatology | DISORDERS | GUT MICROBIOTA | NECROTIZING ENTEROCOLITIS | GASTROENTEROLOGY & HEPATOLOGY | INFLAMMATION | Gastrointestinal Diseases - therapy | Probiotics - therapeutic use | Animals | Intestines - microbiology | Intestines - physiology | Humans | Probiotics
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8. Full Text How to swim with sharks: a perspective on Voltaire Cousteau’s primer
by Shanahan, F
QJM: An International Journal of Medicine, ISSN 1460-2725, 01/2019, Volume 112, Issue 1, pp. 61 - 62
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9. Full Text The colonic microbiota in health and disease
by Shanahan, Fergus
Current Opinion in Gastroenterology, ISSN 0267-1379, 01/2013, Volume 29, Issue 1, pp. 49 - 54
PURPOSE OF REVIEWDiverse research interests have converged on the gut microbiota because of its contribution to immune development, mucosal homeostasis and to... 
metabolic syndrome | microbiota | irritable bowel syndrome | colon cancer | inflammatory bowel disease | mucosal immunity | EARLY-LIFE | ULCERATIVE-COLITIS | HOST | COLONIZATION | GUT MICROBIOTA | PATHOBIONT | TRANSPLANTATION | DIET | GASTROENTEROLOGY & HEPATOLOGY | PROMOTES | IRRITABLE-BOWEL-SYNDROME | Enterocolitis, Pseudomembranous - therapy | Inflammasomes | Humans | Clostridium difficile | Colon - immunology | Enterocolitis, Pseudomembranous - microbiology | Immunity, Innate | Colon - metabolism | Irritable Bowel Syndrome - microbiology | Feces - microbiology | Colon - microbiology | Metagenome | Colonic Neoplasms - microbiology
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10. Full Text The gut flora as a forgotten organ
by Shanahan, Fergus and O'Hara, Ann M
EMBO reports, ISSN 1469-221X, 07/2006, Volume 7, Issue 7, pp. 688 - 693
The intestinal microflora is a positive health asset that crucially influences the normal structural and functional development of the mucosal immune system.... 
homeostasis | intestinal epithelium | commensal bacteria | Homeostasis | Intestinal epithelium | Commensal bacteria | CROHNS-DISEASE | BIOCHEMISTRY & MOLECULAR BIOLOGY | PROINFLAMMATORY GENE-EXPRESSION | KAPPA-B | NOD2 | INTESTINAL EPITHELIAL-CELLS | CELL BIOLOGY | RESPONSES | INFLAMMATORY-BOWEL-DISEASE | TOLL-LIKE RECEPTORS | MODULATION | Humans | Immunity, Mucosal | Digestive System - immunology | Digestive System Diseases - microbiology | Intestinal Mucosa - microbiology | Bacteria - immunology | Animals | Intestinal Mucosa - immunology | Models, Biological | Germ-Free Life | Digestive System Diseases - immunology | Digestive System - microbiology | Genetics | Anatomy & physiology | Immune system | Review
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11. Clinical problems in GI arising from stress and mind-body interactions
by Olden, Kevin W and Shanahan, Fergus
1999, Seminars in gastrointestinal disease, Volume 10, no. 1., 45
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12. Full Text Changing the narrative on antibiotics
by Shanahan, Fergus
Gut, ISSN 0017-5749, 11/2015, Volume 64, Issue 11, pp. 1674 - 1675
  Whether these would have less toxicity is uncertain but the principle has already been confirmed with the discovery of a new peptide/bacteriocin agent with... 
RESISTANCE | MICROBIOTA | GASTROENTEROLOGY & HEPATOLOGY | DISEASE | Anti-Bacterial Agents - pharmacology | Animals | Gastrointestinal Microbiome - drug effects | Gastrointestinal Microbiome - genetics | Gene Regulatory Networks | Drug resistance in microorganisms | Dosage and administration | Antibiotics | Health aspects | Analysis | Immunodeficiency | Prescription drugs | Drug resistance | Gene expression | Design of experiments | Metabolic disorders
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13. Full Text Probiotics and inflammatory bowel disease: Is there a scientific rationale?
by Shanahan, Fergus
Inflammatory Bowel Diseases, ISSN 1078-0998, 2000, Volume 6, Issue 2, pp. 107 - 115
Microflora -pathogenesis | Treatment - Prebiotic | Crohn's disease | Food | Ulcerative colitis
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14. Full Text Fiber man meets microbial man
by Shanahan, Fergus
American Journal of Clinical Nutrition, ISSN 0002-9165, 01/2015, Volume 101, Issue 1, pp. 1 - 2
NUTRITION & DIETETICS | Microbiota | Intestines - microbiology | Humans | Bacteroidetes - growth & development | Male | Gram-Positive Bacteria - growth & development | Prebiotics
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15. Full Text Inflammatory bowel disease: Immunodiagnostics, immunotherapeutics, and ecotherapeutics
by Shanahan, Fergus
Gastroenterology, ISSN 0016-5085, 02/2001, Volume 120, Issue 3, pp. 622 - 635
Treatment options for inflammatory bowel disease (IBD) reflect a continuing shift from empiricism to strategies based on improved understanding of the... 
MATRIX METALLOPROTEINASES | TUMOR-NECROSIS-FACTOR | COLONY-STIMULATING FACTOR | CROHNS-DISEASE | EXPERIMENTAL COLITIS | FECAL STREAM | RESIDENT INTESTINAL FLORA | MONOCLONAL-ANTIBODY CA2 | GASTROENTEROLOGY & HEPATOLOGY | T-CELLS | GASTROINTESTINAL INFLAMMATION | Genetic Therapy | Humans | Immunosuppressive Agents - therapeutic use | Inflammatory Bowel Diseases - immunology | Inflammatory Bowel Diseases - diagnosis | Matrix Metalloproteinase Inhibitors | Probiotics - therapeutic use | Inflammatory Bowel Diseases - therapy | Tumor Necrosis Factor-alpha - antagonists & inhibitors
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16. Full Text Gut Microbes: From Bugs to Drugs
by Shanahan, Fergus
The American Journal of Gastroenterology, ISSN 0002-9270, 02/2010, Volume 105, Issue 2, pp. 275 - 279
A poorly appreciated truism is that the information contained within the mammalian genome is insufficient for full development of several organ systems,... 
INFLAMMATORY-BOWEL-DISEASE | CROHN-DISEASE | MOLECULE | PROBIOTICS | GASTROENTEROLOGY & HEPATOLOGY | INTESTINAL HOMEOSTASIS | INNATE IMMUNITY | MURINE | Host-Pathogen Interactions | Probiotics | Intestines - microbiology | Diet | Humans | Drug Discovery - trends | Metagenome | Microbial Interactions
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