Nucleic Acids Research, ISSN 0305-1048, 01/2015, Volume 43, Issue 1, pp. D1057 - D1063
The Gene Ontology Annotation (GOA) resource ( ext-link-type="uri" xlink:href="http://www.ebi.ac.uk/GOA" xlink:type="simple">http://www.ebi.ac.uk/GOA) provides...
BIOCHEMISTRY & MOLECULAR BIOLOGY | Proteins - genetics | Databases, Protein | Humans | Molecular Sequence Annotation | Software | Internet | Gene Ontology | Database Issue
BIOCHEMISTRY & MOLECULAR BIOLOGY | Proteins - genetics | Databases, Protein | Humans | Molecular Sequence Annotation | Software | Internet | Gene Ontology | Database Issue
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2017, Volume 45, Issue 1, pp. D158 - D169
The UniProt knowledgebase is a large resource of protein sequences and associated detailed annotation. The database contains over 60 million sequences, of...
DISEASES | DATABASE | CLUSTERS | BIOCHEMISTRY & MOLECULAR BIOLOGY | GUIDELINES | SEQUENCE VARIANTS | CLASSIFICATION | CHROMOSOMES | TUBULIN | RESOURCE | GLUTAMYLATION
DISEASES | DATABASE | CLUSTERS | BIOCHEMISTRY & MOLECULAR BIOLOGY | GUIDELINES | SEQUENCE VARIANTS | CLASSIFICATION | CHROMOSOMES | TUBULIN | RESOURCE | GLUTAMYLATION
Journal Article
Journal of Comparative Neurology, ISSN 0021-9967, 10/2017, Volume 525, Issue 14, pp. 2991 - 3009
This study explored why lesioned retinal ganglion cell (RGC) axons regenerate successfully in the zebrafish optic nerve despite the presence of Rtn4b, the...
retinal explants | single cell neurons | RRID:AB_2636940 | RRID: AB_301787 | Nogo‐A/RTN4‐A homologue | Nogo receptors | optic nerve regeneration | growth in stripes | neurite growth inhibitor | zebrafish Rtn4b | RRID: AB_10562367 | RRID:AB_2315032 | RRID:AB_10000211 | RRID:AB_2636941 | Nogo-A/RTN4-A homologue | CELL-SURFACE | SPINAL-CORD | GLIAL-CELLS | NEURITE GROWTH | ZOOLOGY | NOGO-A EXPRESSION | CNS MYELIN | Nogo-A | RETINAL AXONS | NEUROSCIENCES | RTN4-A homologue | XENOPUS-LAEVIS | FIBER GROWTH | ADAPTIVE PLASTICITY | Optic Nerve - pathology | Axons - physiology | Myelin Sheath - metabolism | Tissue Scaffolds | Nogo Receptors - antagonists & inhibitors | Nogo Proteins - chemistry | Optic Nerve Injuries - pathology | Goldfish | Neuronal Outgrowth - physiology | Optic Nerve - physiology | Retinal Ganglion Cells - physiology | Zebrafish Proteins - chemistry | Tissue Culture Techniques | Zebrafish Proteins - metabolism | Mice, Inbred C57BL | Optic Nerve Injuries - physiopathology | Retina - physiopathology | Cells, Cultured | Rats | Zebrafish | Hippocampus - pathology | Nerve Regeneration | Chick Embryo | Amino Acid Motifs | Myelin Proteins - chemistry | Animals | Nogo Proteins - metabolism | Myelin Proteins - metabolism | Nogo Receptors - metabolism | Hippocampus - physiopathology | Retina - pathology | Explants | Optic nerve | Neurons | Myelin | Axonogenesis | Homology | Abundance | Retina | Substrates | Proteins | Nogo protein | Regeneration | Axons | Retinal ganglion cells | Receptors | Paths | Polylysine | Hippocampus
retinal explants | single cell neurons | RRID:AB_2636940 | RRID: AB_301787 | Nogo‐A/RTN4‐A homologue | Nogo receptors | optic nerve regeneration | growth in stripes | neurite growth inhibitor | zebrafish Rtn4b | RRID: AB_10562367 | RRID:AB_2315032 | RRID:AB_10000211 | RRID:AB_2636941 | Nogo-A/RTN4-A homologue | CELL-SURFACE | SPINAL-CORD | GLIAL-CELLS | NEURITE GROWTH | ZOOLOGY | NOGO-A EXPRESSION | CNS MYELIN | Nogo-A | RETINAL AXONS | NEUROSCIENCES | RTN4-A homologue | XENOPUS-LAEVIS | FIBER GROWTH | ADAPTIVE PLASTICITY | Optic Nerve - pathology | Axons - physiology | Myelin Sheath - metabolism | Tissue Scaffolds | Nogo Receptors - antagonists & inhibitors | Nogo Proteins - chemistry | Optic Nerve Injuries - pathology | Goldfish | Neuronal Outgrowth - physiology | Optic Nerve - physiology | Retinal Ganglion Cells - physiology | Zebrafish Proteins - chemistry | Tissue Culture Techniques | Zebrafish Proteins - metabolism | Mice, Inbred C57BL | Optic Nerve Injuries - physiopathology | Retina - physiopathology | Cells, Cultured | Rats | Zebrafish | Hippocampus - pathology | Nerve Regeneration | Chick Embryo | Amino Acid Motifs | Myelin Proteins - chemistry | Animals | Nogo Proteins - metabolism | Myelin Proteins - metabolism | Nogo Receptors - metabolism | Hippocampus - physiopathology | Retina - pathology | Explants | Optic nerve | Neurons | Myelin | Axonogenesis | Homology | Abundance | Retina | Substrates | Proteins | Nogo protein | Regeneration | Axons | Retinal ganglion cells | Receptors | Paths | Polylysine | Hippocampus
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2015, Volume 43, Issue 1, pp. D204 - D212
UniProt is an important collection of protein sequences and their annotations, which has doubled in size to 80 million sequences during the past year. This...
DATABASE | ANNOTATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | Sequence Analysis, Protein | Proteome | Databases, Protein | Molecular Sequence Annotation | Database Issue
DATABASE | ANNOTATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | Sequence Analysis, Protein | Proteome | Databases, Protein | Molecular Sequence Annotation | Database Issue
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2014, Volume 42, Issue 1, pp. D191 - D198
The mission of the Universal Protein Resource (UniProt) (http://www.uniprot.org) is to provide the scientific community with a comprehensive, high-quality and...
REPRESENTATION | ONTOLOGY | GENOME DATABASE | BIOCHEMISTRY & MOLECULAR BIOLOGY | FAMILY
REPRESENTATION | ONTOLOGY | GENOME DATABASE | BIOCHEMISTRY & MOLECULAR BIOLOGY | FAMILY
Journal Article
Genome Biology, ISSN 1474-7596, 2016, Volume 17, Issue 1, p. 184
Background: A major bottleneck in our understanding of the molecular underpinnings of life is the assignment of function to proteins. While molecular...
Disease gene prioritization | Protein function prediction | ADAM | DISINTEGRIN | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | GENETICS & HEREDITY | ONTOLOGY | Proteins - genetics | Algorithms | Databases, Protein | Humans | Molecular Sequence Annotation | Computational Biology | Software | Structure-Activity Relationship | Proteins - chemistry | Gene Ontology | Automation | Phenotypes | Ontology | Genes | Benchmarks | Experiments | Data bases | Proteins | Accuracy | Annotations | Computer applications | Bioinformatics | Methods | Quantitative Biology - Quantitative Methods
Disease gene prioritization | Protein function prediction | ADAM | DISINTEGRIN | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | GENETICS & HEREDITY | ONTOLOGY | Proteins - genetics | Algorithms | Databases, Protein | Humans | Molecular Sequence Annotation | Computational Biology | Software | Structure-Activity Relationship | Proteins - chemistry | Gene Ontology | Automation | Phenotypes | Ontology | Genes | Benchmarks | Experiments | Data bases | Proteins | Accuracy | Annotations | Computer applications | Bioinformatics | Methods | Quantitative Biology - Quantitative Methods
Journal Article
Journal of Comparative Neurology, ISSN 0021-9967, 10/2017, Volume 525, Issue 14, pp. 2991 - 3009
Journal Article
Neurobiology of Disease, ISSN 0969-9961, 2012, Volume 51, pp. 168 - 176
Abstract The ability of fish retinal ganglion cells (RGCs) to regenerate their axons was shown to require the re-expression and function of the two proteins...
Neurology | Reggie-1/flotillin-2 | Axon regeneration | Neurite outgrowth | Optic nerve crush | NOGO-A | CNS | OUTGROWTH | NEUROSCIENCES | RETINAL GANGLION-CELLS | INHIBITION | REGGIE-2 | DIFFERENTIATION | PROTEINS | Up-Regulation | Transduction, Genetic | Rats, Wistar | Nerve Regeneration - physiology | Axons - metabolism | Rats | Neurites - metabolism | Blotting, Western | Membrane Proteins - biosynthesis | Animals | Signal Transduction - physiology | Mice | Optic Nerve - metabolism | Sulfates | Growth | Cells
Neurology | Reggie-1/flotillin-2 | Axon regeneration | Neurite outgrowth | Optic nerve crush | NOGO-A | CNS | OUTGROWTH | NEUROSCIENCES | RETINAL GANGLION-CELLS | INHIBITION | REGGIE-2 | DIFFERENTIATION | PROTEINS | Up-Regulation | Transduction, Genetic | Rats, Wistar | Nerve Regeneration - physiology | Axons - metabolism | Rats | Neurites - metabolism | Blotting, Western | Membrane Proteins - biosynthesis | Animals | Signal Transduction - physiology | Mice | Optic Nerve - metabolism | Sulfates | Growth | Cells
Journal Article
9.
Full Text
No Nogo66- and NgR-Mediated Inhibition of Regenerating Axons in the Zebrafish Optic Nerve
Journal of Neuroscience, ISSN 0270-6474, 12/2009, Volume 29, Issue 49, pp. 15489 - 15498
In contrast to mammals, lesioned axons in the zebrafish (ZF) optic nerve regenerate and restore vision. This correlates with the absence of the NogoA-specific...
RETINAL GANGLION-CELLS | GROWTH CONES | MYELIN | NEURITE OUTGROWTH | LIM KINASE | GOLDFISH TECTUM | NOGO-66 RECEPTOR | CNS | IDENTIFICATION | MULTIPLE SEQUENCE ALIGNMENT | NEUROSCIENCES | Neurites - physiology | Species Specificity | Humans | Nerve Regeneration - physiology | Axons - physiology | Actin Depolymerizing Factors - metabolism | Neurons - physiology | Nogo Proteins | Growth Cones - physiology | Optic Nerve - physiology | Retinal Ganglion Cells - physiology | Signal Transduction | Zebrafish Proteins - metabolism | Rats | Receptors, Cell Surface - metabolism | Zebrafish | Myelin Proteins - genetics | Retina - physiology | Animals | Glycosylphosphatidylinositols - metabolism | Mice | HeLa Cells | Hippocampus - physiology | In Vitro Techniques | Myelin Proteins - metabolism
RETINAL GANGLION-CELLS | GROWTH CONES | MYELIN | NEURITE OUTGROWTH | LIM KINASE | GOLDFISH TECTUM | NOGO-66 RECEPTOR | CNS | IDENTIFICATION | MULTIPLE SEQUENCE ALIGNMENT | NEUROSCIENCES | Neurites - physiology | Species Specificity | Humans | Nerve Regeneration - physiology | Axons - physiology | Actin Depolymerizing Factors - metabolism | Neurons - physiology | Nogo Proteins | Growth Cones - physiology | Optic Nerve - physiology | Retinal Ganglion Cells - physiology | Signal Transduction | Zebrafish Proteins - metabolism | Rats | Receptors, Cell Surface - metabolism | Zebrafish | Myelin Proteins - genetics | Retina - physiology | Animals | Glycosylphosphatidylinositols - metabolism | Mice | HeLa Cells | Hippocampus - physiology | In Vitro Techniques | Myelin Proteins - metabolism
Journal Article
Molecular Biology and Evolution, ISSN 0737-4038, 04/2011, Volume 28, Issue 4, p. 1363
Unlike mammals, fish are able to regenerate axons in their central nervous system. This difference has been partly attributed to the loss/acquisition of...
Proteins | Genes | Nervous system | Fish | Genomes | Comparative analysis
Proteins | Genes | Nervous system | Fish | Genomes | Comparative analysis
Journal Article
Molecular Biology and Evolution, ISSN 0737-4038, 04/2011, Volume 28, Issue 4, pp. 1363 - 1370
Unlike mammals, fish are able to regenerate axons in their central nervous system. This difference has been partly attributed to the loss/acquisition of...
reticulon | axon regeneration | neurite outgrowth inhibitors | Nogo-A | neurocan | BIOCHEMISTRY & MOLECULAR BIOLOGY | AXONAL REGENERATION | SPINAL-CORD | CELL-ADHESION | PROTEIN-STRUCTURE PREDICTION | EVOLUTIONARY BIOLOGY | NEURITE OUTGROWTH | GOLDFISH OPTIC-NERVE | SEQUENCE ALIGNMENT | CNS MYELIN | GROWTH | GENETICS & HEREDITY | GENE FAMILY | Amino Acid Sequence | Fishes - genetics | Jaw | Vertebrates - genetics | Humans | Molecular Sequence Data | Axons - physiology | Phylogeny | Myelin Proteins - genetics | Biological Evolution | Sequence Alignment | Animals | Vertebrates - classification | Nogo Proteins | Protein Isoforms - genetics
reticulon | axon regeneration | neurite outgrowth inhibitors | Nogo-A | neurocan | BIOCHEMISTRY & MOLECULAR BIOLOGY | AXONAL REGENERATION | SPINAL-CORD | CELL-ADHESION | PROTEIN-STRUCTURE PREDICTION | EVOLUTIONARY BIOLOGY | NEURITE OUTGROWTH | GOLDFISH OPTIC-NERVE | SEQUENCE ALIGNMENT | CNS MYELIN | GROWTH | GENETICS & HEREDITY | GENE FAMILY | Amino Acid Sequence | Fishes - genetics | Jaw | Vertebrates - genetics | Humans | Molecular Sequence Data | Axons - physiology | Phylogeny | Myelin Proteins - genetics | Biological Evolution | Sequence Alignment | Animals | Vertebrates - classification | Nogo Proteins | Protein Isoforms - genetics
Journal Article
Biochemical Journal, ISSN 0264-6021, 02/2017, Volume 474, Issue 4, pp. 493 - 515
Protein kinases form one of the largest protein families and are found in all species, from viruses to humans. They catalyze the reversible phosphorylation of...
KINASE FAMILY | DOMAIN | PHOSPHORYLATION | ANNOTATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | RECEPTOR | TRANSDUCTION | PROTEIN FAMILIES DATABASE | MECHANISMS | IDENTIFICATION | BINDING | Protein Kinases - metabolism | Amino Acid Sequence | User-Computer Interface | Protein Kinases - genetics | Proteome - genetics | Signal Transduction | Caenorhabditis elegans - genetics | Coenzymes - genetics | Humans | Molecular Sequence Annotation | Gene Expression Regulation | Caenorhabditis elegans Proteins - metabolism | Proteome - classification | Coenzymes - metabolism | Animals | Protein Kinases - classification | Databases, Protein | Proteomics | Internet | Caenorhabditis elegans Proteins - genetics | Proteome - metabolism | Caenorhabditis elegans - enzymology | Gene Ontology | UniProtKB | database | kinase | Review | curation
KINASE FAMILY | DOMAIN | PHOSPHORYLATION | ANNOTATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | RECEPTOR | TRANSDUCTION | PROTEIN FAMILIES DATABASE | MECHANISMS | IDENTIFICATION | BINDING | Protein Kinases - metabolism | Amino Acid Sequence | User-Computer Interface | Protein Kinases - genetics | Proteome - genetics | Signal Transduction | Caenorhabditis elegans - genetics | Coenzymes - genetics | Humans | Molecular Sequence Annotation | Gene Expression Regulation | Caenorhabditis elegans Proteins - metabolism | Proteome - classification | Coenzymes - metabolism | Animals | Protein Kinases - classification | Databases, Protein | Proteomics | Internet | Caenorhabditis elegans Proteins - genetics | Proteome - metabolism | Caenorhabditis elegans - enzymology | Gene Ontology | UniProtKB | database | kinase | Review | curation
Journal Article