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science & technology (10) 10
hiv-1 - genetics (8) 8
rna, viral - genetics (7) 7
genomes (6) 6
packaging (6) 6
hiv (5) 5
human immunodeficiency virus--hiv (5) 5
life sciences & biomedicine (5) 5
multidisciplinary sciences (5) 5
ribonucleic acid--rna (5) 5
rna (5) 5
rna, viral - chemistry (5) 5
science & technology - other topics (5) 5
biochemistry & molecular biology (4) 4
hiv-1 - physiology (4) 4
humans (4) 4
nuclear magnetic resonance--nmr (4) 4
virus assembly (4) 4
binding sites (3) 3
dimers (3) 3
gag protein (3) 3
genetic aspects (3) 3
genome, viral (3) 3
mutation (3) 3
nuclear magnetic resonance, biomolecular (3) 3
nucleic acid conformation (3) 3
proteins (3) 3
viruses (3) 3
5' untranslated regions (2) 2
base pairing (2) 2
base sequence (2) 2
dimerization (2) 2
guanosine - chemistry (2) 2
hiv-1 (2) 2
human immunodeficiency virus (2) 2
molecular sequence data (2) 2
nuclear magnetic resonance (2) 2
polyproteins (2) 2
protein binding (2) 2
protein biosynthesis (2) 2
research (2) 2
retrovirus (2) 2
structure (2) 2
transcription (2) 2
transcription initiation site (2) 2
virology (2) 2
5' untranslated regions - genetics (1) 1
5'-leader (1) 1
5′-leader (1) 1
accessibility (1) 1
active transport, cell nucleus (1) 1
affinity (1) 1
analysis (1) 1
anti-hiv agents - pharmacology (1) 1
apobec3h (1) 1
assembling (1) 1
assembly (1) 1
base composition (1) 1
base pairs (1) 1
binding (1) 1
biological and medical sciences (1) 1
biological sciences (1) 1
cell line (1) 1
cells (1) 1
cellular response to infection (1) 1
chemical bases (1) 1
chemical properties (1) 1
codon, initiator (1) 1
cytoplasm (1) 1
deamination (1) 1
deoxyribonucleic acid--dna (1) 1
deuterium (1) 1
diploid genome packaging (1) 1
dna mismatch repair - drug effects (1) 1
dna mismatch repair - genetics (1) 1
dna polymerases (1) 1
dna primers - genetics (1) 1
dna replication - drug effects (1) 1
dna replication - genetics (1) 1
dna, viral - genetics (1) 1
drug resistance, viral - genetics (1) 1
elongated structure (1) 1
encapsidation (1) 1
enzymes (1) 1
eukaryotic initiation factor-4e - metabolism (1) 1
forced copy choice recombination (1) 1
forced copy-choice recombination (1) 1
free energy calculation (1) 1
fundamental and applied biological sciences. psychology (1) 1
gag gene products, human immunodeficiency virus - chemistry (1) 1
gag gene products, human immunodeficiency virus - genetics (1) 1
gag gene products, human immunodeficiency virus - metabolism (1) 1
gene expression regulation (1) 1
gene expression regulation, viral (1) 1
gene products, gag - genetics (1) 1
gene products, gag - metabolism (1) 1
genes, gag (1) 1
genetic heterogeneity (1) 1
genetic mutation (1) 1
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1. Full Text Structure of the HIV-1 RNA packaging signal
by Sarah C. Keane and Xiao Heng and Kun Lu and Siarhei Kharytonchyk and Venkateswaran Ramakrishnan and Gregory Carter and Shawn Barton and Azra Hosic and Alyssa Florwick and Justin Santos and Nicholas C. Bolden and Sayo McCowin and David A. Case and Bruce A. Johnson and Marco Salemi and Alice Telesnitsky and Michael F. Summers
Science (American Association for the Advancement of Science), ISSN 0036-8075, 5/2015, Volume 348, Issue 6237, pp. 917 - 921
REPORTS | Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Genetic aspects | Research | Nuclear magnetic resonance | HIV (Viruses) | Analysis | Protein binding | Proteins | Genomes | Nuclear magnetic resonance--NMR | Ribonucleic acid--RNA | Human immunodeficiency virus--HIV | Binding | Ribonucleic acids | Packaging | Human immunodeficiency virus | Translations
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2. Full Text NMR Detection of Structures in the HIV-1 5'-Leader RNA That Regulate Genome Packaging
by Kun Lu and Xiao Heng and Lianko Garyu and Sarah Monti and Eric L. Garcia and Siarhei Kharytonchyk and Bilguujin Dorjsuren and Gowry Kulandaivel and Simonne Jones and Atheeth Hiremath and Sai Sachin Divakaruni and Courtney LaCotti and Shawn Barton and Daniel Tummillo and Azra Hosic and Kedy Edme and Sara Albrecht and Alice Telesnitsky and Michael F. Summers
Science (American Association for the Advancement of Science), ISSN 0036-8075, 10/2011, Volume 334, Issue 6053, pp. 242 - 245
RNA | REPORTS | Chemical bases | Packaging | Dimers | Genomes | Gene expression regulation | Nuclear magnetic resonance | Dimerization | Genetic mutation | Monomers | Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Replicative cycle, interference, host-virus relations, pathogenicity, miscellaneous strains | Biological and medical sciences | Microbiology | Virology | Genome, Viral | Protein Biosynthesis | Mutagenesis, Site-Directed | Codon, Initiator | HIV-1 - genetics | Virus Assembly | Human Immunodeficiency Virus Proteins - metabolism | gag Gene Products, Human Immunodeficiency Virus - metabolism | HIV-1 - physiology | RNA, Viral - chemistry | RNA, Viral - genetics | Base Pairing | Nucleocapsid Proteins - metabolism | 5' Untranslated Regions | Genes, gag | Nuclear Magnetic Resonance, Biomolecular | Protein Binding | Nucleic Acid Conformation | Binding Sites | Usage | Genetic research | Genetic aspects | Research | HIV (Viruses) | Structure | Methods | Proteins | Nuclear magnetic resonance--NMR | Ribonucleic acid--RNA | Human immunodeficiency virus--HIV | Index Medicus | Base pairs
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3. Full Text Flexibility in Nucleic Acid Binding Is Central to APOBEC3H Antiviral Activity
by Bohn, Jennifer A and DaSilva, Justin and Kharytonchyk, Siarhei and Mercedes, Maria and Vosters, Jennifer and Telesnitsky, Alice and Hatziioannou, Theodora and Smith, Janet L
Journal of virology, ISSN 0022-538X, 12/2019, Volume 93, Issue 24
Life Sciences & Biomedicine | Science & Technology | Virology | Index Medicus
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4. Full Text Analysis of the human immunodeficiency virus-1 RNA packageome
by Eckwahl, Matthew J and Arnion, Helene and Kharytonchyk, Siarhei and Zang, Trinity and Bieniasz, Paul D and Telesnitsky, Alice and Wolin, Sandra L
RNA (Cambridge), ISSN 1355-8382, 08/2016, Volume 22, Issue 8, pp. 1228 - 1238
Retrotransposons | Retrovirus | Noncoding RNA precursors | pre-tRNAs | Nuclear export | Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Cell Line | RNA, Viral - genetics | HIV-1 - genetics | Humans | Index Medicus | retrovirus | noncoding RNA precursors | retrotransposons | nuclear export
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5. Full Text Identification of a Minimal Region of the HIV-1 5′-Leader Required for RNA Dimerization, NC Binding, and Packaging
by Heng, Xiao and Kharytonchyk, Siarhei and Garcia, Eric L and Lu, Kun and Divakaruni, Sai Sachin and LaCotti, Courtney and Edme, Kedy and Telesnitsky, Alice and Summers, Michael F
Journal of molecular biology, ISSN 0022-2836, 03/2012, Volume 417, Issue 3, pp. 224 - 239
ITC | nucleocapsid protein | retrovirus assembly | RNA structure | diploid genome packaging | Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Gene Products, gag - genetics | Molecular Sequence Data | HIV Long Terminal Repeat | Poly A - genetics | HIV-1 - genetics | Gene Products, gag - metabolism | RNA, Viral - chemistry | RNA, Viral - genetics | 5' Untranslated Regions | Nucleocapsid - metabolism | Base Sequence | RNA, Viral - metabolism | Mutation | Dimerization | RNA | Ribonuclease | Chemical properties | polyproteins | Gag protein | Nucleocapsids | Ribonucleoproteins | Packaging | Genomes | Cytoplasm | Index Medicus
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6. Full Text Resolution of Specific Nucleotide Mismatches by Wild-Type and AZT-Resistant Reverse Transcriptases during HIV-1 Replication
by Kharytonchyk, Siarhei and King, Steven R and Ndongmo, Clement B and Stilger, Krista L and An, Wenfeng and Telesnitsky, Alice
Journal of molecular biology, ISSN 0022-2836, 06/2016, Volume 428, Issue 11, pp. 2275 - 2288
forced copy-choice recombination | retroviral error mechanisms | Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Anti-HIV Agents - pharmacology | Virus Replication - drug effects | DNA Replication - drug effects | HIV-1 - drug effects | Virus Replication - genetics | Humans | DNA Mismatch Repair - drug effects | Nucleotides - genetics | Reverse Transcriptase Inhibitors - pharmacology | Templates, Genetic | DNA Primers - genetics | DNA Mismatch Repair - genetics | HIV-1 - genetics | Mutation - genetics | HIV Reverse Transcriptase - metabolism | Drug Resistance, Viral - genetics | Mutation - drug effects | DNA Replication - genetics | DNA, Viral - genetics | DNA polymerases | Enzymes | Reverse transcriptase inhibitors | Nucleotides | Sarcoma | HIV (Viruses) | Index Medicus | forced copy choice recombination | Retroviral error mechanisms
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7. Full Text Influence of gag and RRE Sequences on HIV-1 RNA Packaging Signal Structure and Function
by Kharytonchyk, Siarhei and Brown, Joshua D and Stilger, Krista and Yasin, Saif and Iyer, Aishwarya S and Collins, John and Summers, Michael F and Telesnitsky, Alice
Journal of molecular biology, ISSN 0022-2836, 07/2018, Volume 430, Issue 14, pp. 2066 - 2079
free energy calculation | RNA packaging | retrovirus | Mfold | RNA dimerization | Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | HIV-1 - physiology | RNA, Viral - chemistry | RNA, Viral - genetics | Humans | HEK293 Cells | rev Gene Products, Human Immunodeficiency Virus - genetics | Active Transport, Cell Nucleus | gag Gene Products, Human Immunodeficiency Virus - genetics | HIV-1 - genetics | Nucleic Acid Conformation | Virus Assembly | RNA | Packaging | HIV (Viruses) | Index Medicus | Free energy calculation
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8. Full Text Structural basis for transcriptional start site control of HIV-1 RNA fate
by Brown, Joshua D and Kharytonchyk, Siarhei and Chaudry, Issac and Iyer, Aishwarya S and Carter, Hannah and Becker, Ghazal and Desai, Yash and Glang, Lindsay and Choi, Seung H and Singh, Karndeep and Lopresti, Michael W and Orellana, Matthew and Rodriguez, Tatiana and Oboh, Ubiomo and Hijji, Jana and Ghinger, Frances Grace and Stewart, Kailan and Francis, Dillion and Edwards, Bryce and Chen, Patrick and Case, David A and Telesnitsky, Alice and Summers, Michael F
Science (American Association for the Advancement of Science), ISSN 0036-8075, 04/2020, Volume 368, Issue 6489, pp. 413 - 417
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Protein Biosynthesis | Humans | RNA, Messenger - genetics | Eukaryotic Initiation Factor-4E - metabolism | 5' Untranslated Regions - genetics | HIV-1 - genetics | RNA, Viral - genetics | Base Pairing | Guanosine - chemistry | Base Composition | Gene Expression Regulation, Viral | Transcription Initiation Site | Nuclear Magnetic Resonance, Biomolecular | RNA Caps - chemistry | RNA Caps - genetics | Deuterium | Translation | Nuclear magnetic resonance--NMR | Accessibility | Transcription | Splicing | Guanosine | Guanosines | Translation initiation | Genomes | Ribonucleic acid--RNA | Magnetic resonance spectroscopy | Proteins | Progeny | Gag protein | Elongated structure | Virions | Human immunodeficiency virus--HIV | Packaging | Resonance | Dimers | Binding sites | Index Medicus
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