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1. Full Text Design of FRP belts for building retrofitting
by Simakov, Oleg
MATEC Web of Conferences, ISSN 2261-236X, 12/2018, Volume 251, p. 4050
The article gives recommendations on the calculation and design of the restoration of bearing capacity of the buildings that have significant deformations of... 
Fiber reinforced polymers | Polymer matrix composites | Bearing capacity | Deformation | Composite materials | Restoration | Buildings | Brickwork | Retrofitting | Fiber composites | Carbon-epoxy composites | Carbon fiber reinforced plastics
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2. Full Text The dynamic genome of Hydra
by Fraune, Sebastian and Wigge, Philip A and Martinez, Daniel E and Zhang, Xiaoming and Weinmaier, Thomas and Heimberg, Alysha M and Aufschnaiter, Roland and Technau, Ulrich and Franke, André and Salvenmoser, Willi and Simakov, Oleg and Hwang, Jung Shan and Khalturin, Konstantin and Prochnik, Simon E and Viswanathan, Lakshmi Devi and Bertulat, Bianca and Rattei, Thomas and Hayakawa, Shiho and Fujisawa, Toshitaka and Holstein, Thomas W and Goodstein, David M and Dana, Catherine E and Kirkness, Ewen F and Wheeler, Benjamin M and Pfannkoch, Cynthia and Kawashima, Takeshi and Hemmrich, Georg and Gojobori, Takashi and Shu, Shengquiang and Rokhsar, Daniel S and Böttger, Angelika and Ikeo, Kazuho and Sumin, Nadezhda and Borman, Jon and Remington, Karin A and Mitros, Therese and Balasubramanian, Prakash G and Law, Lee and Gorny, Anne-Kathrin and Putnam, Nicholas H and Nakamura, Yukio and Watanabe, Hiroshi and Bosch, Thomas C. G and Steinmetz, Patrick R. H and Hobmayer, Bert and David, Charles N and Peng, Jisong and Walenz, Brian and Eder, Marie-Kristin and Busam, Dana and Venter, J. Craig and Kibler, Dennis F and Hirose, Mamiko and Guder, Corina and Hayakawa, Eisuke and Takahashi, Toshio and Lindgens, Dirk and Wolf, Alexander and Tischler, Patrick and Gee, Lydia and Peterson, Kevin J and Hampson, Steven E and Strausberg, Robert L and Ozbek, Suat and Blumberg, Bruce and Bode, Hans R and Ogura, Atshushi and Hellsten, Uffe and Nishimiya-Fujisawa, Chiemi and Augustin, René and Steele, Robert E and Disbennett, Kathryn and Chapman, Jarrod A and Sutton, Granger G and Joint Genome Institute (JGI)
Nature, ISSN 0028-0836, 03/2010, Volume 464, Issue 7288, pp. 592 - 596
The freshwater cnidarian Hydra was first described in 1702 and has been the object of study for 300 years. Experimental studies of Hydra between 1736 and 1744... 
MAINTENANCE | STEM-CELLS | GENE | CNIDARIANS | SEA-ANEMONE | HOX CLUSTER | TYROSINE KINASE | MULTIDISCIPLINARY SCIENCES | EXPRESSION | BASAL METAZOAN HYDRA | MOLECULES | Genome, Bacterial - genetics | Animals | Comamonadaceae - genetics | Hydra - microbiology | Hydra - genetics | Hydra - ultrastructure | DNA Transposable Elements - genetics | Genome - genetics | Anthozoa - genetics | Molecular Sequence Data | Neuromuscular Junction - ultrastructure | Gene Transfer, Horizontal - genetics | Physiological aspects | Genetic aspects | Transposons | Research | DNA binding proteins | Stem cells | Proteins | Genetic engineering | Genes | Genomics | Index Medicus
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3. Full Text Ancient animal microRNAs and the evolution of tissue identity
by Raible, Florian and Simakov, Oleg and Bork, Peer and Arendt, Detlev and Hannon, Gregory J and Snyman, Heidi and Christodoulou, Foteini and Klaus, Sebastian and Trachana, Kalliopi and Tomer, Raju
Nature, ISSN 0028-0836, 02/2010, Volume 463, Issue 7284, pp. 1084 - 1088
The spectacular escalation in complexity in early bilaterian evolution correlates with a strong increase in the number of microRNAs. To explore the link... 
SPATIAL EXPRESSION | NERVOUS-SYSTEM | NEMATOSTELLA-VECTENSIS | EMBRYONIC-DEVELOPMENT | RNA | MULTIDISCIPLINARY SCIENCES | GENES | TARGETS | LET-7 | DROSOPHILA | Cilia - physiology | Conserved Sequence - genetics | Polychaeta - genetics | Sea Anemones - genetics | Molecular Sequence Data | Sea Urchins - genetics | Phylogeny | Polychaeta - anatomy & histology | Brain - metabolism | Sea Urchins - anatomy & histology | In Situ Hybridization | MicroRNAs - analysis | Annelida - genetics | Sea Anemones - cytology | Annelida - anatomy & histology | Sea Urchins - cytology | Digestive System - metabolism | Sea Anemones - anatomy & histology | Annelida - cytology | Organ Specificity | Biological Evolution | Polychaeta - cytology | Animals | MicroRNAs - genetics | Digestive System - cytology | Molecular evolution | MicroRNA | Deuterostomia | Physiological aspects | Genetic aspects | Research | Identification and classification | Natural history | Tissue | Vertebrates | Evolution | Hybridization | Information processing | Brain | Correlation | Sea urchins | Central nervous system | Organs | Localization | Index Medicus
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4. Full Text The genomic substrate for adaptive radiation in African cichlid fish
by Brawand, David and Brawand, David and Wagner, Catherine E and Wagner, Catherine E and Li, Yang I and Li, Yang I and Malinsky, Milan and Malinsky, Milan and Keller, Irene and Keller, Irene and Fan, Shaohua and Fan, Shaohua and Simakov, Oleg and Simakov, Oleg and Ng, Alvin Y and Ng, Alvin Y and Lim, Zhi Wei and Lim, Zhi Wei and Bezault, Etienne and Bezault, Etienne and Turner-Maier, Jason and Turner-Maier, Jason and Johnson, Jeremy and Johnson, Jeremy and Alcazar, Rosa and Alcazar, Rosa and Noh, Hyun Ji and Noh, Hyun Ji and Russell, Pamela and Russell, Pamela and Aken, Bronwen and Aken, Bronwen and Alföldi, Jessica and Alföldi, Jessica and Amemiya, Chris and Amemiya, Chris and Azzouzi, Naoual and Azzouzi, Naoual and Baroiller, Jean-François and Baroiller, Jean-François and Barloy-Hubler, Frederique and Barloy-Hubler, Frederique and Berlin, Aaron and Berlin, Aaron and Bloomquist, Ryan and Bloomquist, Ryan and Carleton, Karen L and Carleton, Karen L and Conte, Matthew A and Conte, Matthew A and D'Cotta, Helena and D'Cotta, Helena and Eshel, Orly and Eshel, Orly and Gaffney, Leslie and Gaffney, Leslie and Galibert, Francis and Galibert, Francis and Gante, Hugo F and Gante, Hugo F and Gnerre, Sante and Gnerre, Sante and Greuter, Lucie and Greuter, Lucie and Guyon, Richard and Guyon, Richard and Haddad, Natalie S and Haddad, Natalie S and Haerty, Wilfried and Haerty, Wilfried and Harris, Rayna M and Harris, Rayna M and Hofmann, Hans A and Hofmann, Hans A and Hourlier, Thibaut and Hourlier, Thibaut and Hulata, Gideon and Hulata, Gideon and Jaffe, David B and Jaffe, David B and Lara, Marcia and Lara, Marcia and Lee, Alison P and Lee, Alison P and MacCallum, Iain and MacCallum, Iain and Mwaiko, Salome and Mwaiko, Salome and Nikaido, Masato and Nikaido, Masato and Nishihara, Hidenori and Nishihara, Hidenori and Ozouf-Costaz, Catherine and Ozouf-Costaz, Catherine and Penman, David J and Penman, David J and Przybylski, Dariusz and Przybylski, Dariusz and Rakotomanga, Michaelle and Rakotomanga, Michaelle and ... and Medicinska fakulteten and Science for Life Laboratory, SciLifeLab and Medicinska och farmaceutiska vetenskapsområdet and Institutionen för medicinsk biokemi och mikrobiologi and Uppsala universitet
Nature, ISSN 0028-0836, 2014, Volume 513, Issue 7518, pp. 375 - 381
Cichlid fishes are famous for large, diverse and replicated adaptive radiations in the Great Lakes of East Africa. To understand themolecular mechanisms... 
CONFLICT | EVOLUTION | LAKE-VICTORIA | TANGANYIKA | SPECIATION | MULTIDISCIPLINARY SCIENCES | DUPLICATION | TRAIT | SEXUAL SELECTION | AGE | Africa, Eastern | Cichlids - classification | Gene Expression Regulation - genetics | Genomics | Genome - genetics | Phylogeny | Cichlids - genetics | Animals | Genetic Speciation | DNA Transposable Elements - genetics | Gene Duplication - genetics | Lakes | Polymorphism, Genetic - genetics | MicroRNAs - genetics | Evolution, Molecular | Cichlidae | Genetic research | Genetic aspects | Research | Adaptation (Biology) | Evolution | Fish | Zebrafish | Genomes | Gene expression | Index Medicus | Life Sciences | Genetics | Basic Medicine | Biological Sciences | Naturvetenskap | Medical and Health Sciences | Microbiology in the medical area | Medicin och hälsovetenskap | Biologiska vetenskaper | Medicinska och farmaceutiska grundvetenskaper | Evolutionsbiologi | Natural Sciences | Mikrobiologi inom det medicinska området | Evolutionary Biology
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5. Full Text The genome of Aiptasia, a sea anemone model for coral symbiosis
by Sebastian Baumgarten and Oleg Simakov and Lisl Y. Esherick and Yi Jin Liew and Erik M. Lehnert and Craig T. Michell and Yong Li and Elizabeth A. Hambleton and Annika Guse and Matt E. Oates and Julian Gough and Virginia M. Weis and Manuel Aranda and John R. Pringle and Christian R. Voolstra
Proceedings of the National Academy of Sciences, ISSN 0027-8424, 09/2015, Volume 112, Issue 38, pp. 11893 - 11898
The most diverse marine ecosystems, coral reefs, depend upon a functional symbiosis between a cnidarian animal host (the coral) and intracellular... 
Coral reefs | Pattern-recognition receptors | Endosymbiosis | Dinoflagellate | Horizontal gene transfer | SYSTEM | REPERTOIRE | MULTIDISCIPLINARY SCIENCES | pattern-recognition receptors | SCLERACTINIAN CORAL | horizontal gene transfer | dinoflagellate | CELL BIOLOGY | CULTURED ZOOXANTHELLAE | MARINE-INVERTEBRATES | NEMATOSTELLA-VECTENSIS | coral reefs | endosymbiosis | HORIZONTAL GENE-TRANSFER | BASAL METAZOAN | INNATE IMMUNITY | Repetitive Sequences, Nucleic Acid - genetics | Synteny - genetics | Anthozoa - physiology | Molecular Sequence Annotation | Genome - genetics | Sea Anemones - genetics | Gene Expression Profiling | Phylogeny | Symbiosis - genetics | Animals | Chromosomes - genetics | Microbial Interactions - genetics | Models, Biological | Genome Size | Gene Transfer, Horizontal - genetics | Evolution, Molecular | Symbiosis | Usage | Anthozoa | Genetic aspects | Research | Nucleotide sequencing | DNA sequencing | Prokaryotes | Algae | Genes | Index Medicus | Biological Sciences
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6. Full Text Genome evolution in the allotetraploid frog Xenopus laevis
by Session, A.M and Uno, Y and Kwon, T and Chapman, J.A and Toyoda, A and Takahashi, S and Fukui, A and Hikosaka, A and Suzuki, A and Kondo, M and Heeringen, S.J. van and Quigley, I and Heinz, S and Ogino, H and Ochi, H and Hellsten, U and Lyons, J.B and Simakov, O and Putnam, N and Stites, J and Kuroki, Y and Tanaka, T and Michiue, T and Watanabe, M and Bogdanovic, O and Lister, R and Georgiou, G and Paranjpe, S.S and Kruijsbergen, I. van and Shu, S and Carlson, J and Kinoshita, T and Ohta, Y and Mawaribuchi, S and Jenkins, J and Grimwood, J and Schmutz, J and Mitros, T and Mozaffari, S.V and Suzuki, Y and Haramoto, Y and Yamamoto, T.S and Takagi, C and Heald, R and Miller, K and Haudenschild, C and Kitzman, J and Nakayama, T and Izutsu, Y and Robert, J and Fortriede, J and Burns, K and Lotay, V and Karimi, K and Yasuoka, Y and Dichmann, D.S and Flajnik, M.F and Houston, D.W and Shendure, J and DuPasquier, L and Vize, P.D and Zorn, A.M and Ito, M and Marcotte, E.M and Wallingford, J.B and Ito, Y and Asashima, M and Ueno, N and Matsuda, Y and Veenstra, G.J.C and Fujiyama, A and Harland, R.M and Taira, M and Rokhsar, D.S
Nature, ISSN 0028-0836, 2016, Volume 538, Issue 7625, pp. 336 - 343
To explore the origins and consequences of tetraploidy in the African clawed frog, we sequenced the Xenopus laevis genome and compared it to the related... 
ORIGIN | FRACTIONATION | TRANSCRIPTOME | MULTIDISCIPLINARY SCIENCES | GENE DUPLICATIONS | CONSEQUENCES | SUBFUNCTIONALIZATION | POLYPLOIDY | TROPICALIS | CHROMOSOMES | DIFFERENTIATION | Conserved Sequence - genetics | Xenopus - genetics | Molecular Sequence Annotation | Genome - genetics | Mutagenesis - genetics | Gene Expression Profiling | Phylogeny | Tetraploidy | Diploidy | Animals | Pseudogenes | Chromosomes - genetics | Gene Deletion | DNA Transposable Elements - genetics | Female | Xenopus laevis - genetics | Karyotype | Evolution, Molecular | Physiological aspects | Polyploidy | Proteins | Frogs | DNA methylation | Epigenetics | Genomes | Artificial chromosomes | Gene expression | Deoxyribonucleic acid--DNA | Index Medicus
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7. Full Text Insights into bilaterian evolution from three spiralian genomes
by Simakov, Oleg and Marletaz, Ferdinand and Cho, Sung-Jin and Edsinger-Gonzales, Eric and Havlak, Paul and Hellsten, Uffe and Kuo, Dian-Han and Larsson, Tomas and Lv, Jie and Arendt, Detlev and Savage, Robert and Osoegawa, Kazutoyo and De Jong, Pieter and Grimwood, Jane and Chapman, Jarrod A and Shapiro, Harris and Aerts, Andrea and Otillar, Robert P and Terry, Astrid Y and Boore, Jeffrey L and Grigoriev, Igor V and Lindberg, David R and Seaver, Elaine C and Weisblat, David A and Putnam, Nicholas H and Rokhsar, Daniel S and Joint Genome Institute (JGI)
Nature, ISSN 0028-0836, 01/2013, Volume 493, Issue 7433, pp. 526 - 531
Current genomic perspectives on animal diversity neglect two prominent phyla, the molluscs and annelids, that together account for nearly one-third of known... 
REPERTOIRE | SCHMIDTEA-MEDITERRANEA | SCHISTOSOMA-MANSONI | MULTIDISCIPLINARY SCIENCES | GENES | RESOLUTION | TREE | ORGANISM | LIFE | Leeches - anatomy & histology | Multigene Family - genetics | Mollusca - genetics | Conserved Sequence - genetics | Polychaeta - genetics | Introns - genetics | Synteny - genetics | Humans | Genome - genetics | Leeches - genetics | INDEL Mutation - genetics | Genes, Homeobox - genetics | Phylogeny | Polychaeta - anatomy & histology | Animals | Genetic Speciation | Mollusca - anatomy & histology | Body Patterning - genetics | Evolution, Molecular | Genetic Linkage | Bilateria | Genetic aspects | Research | Index Medicus
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8. Full Text Experimental Research of the Life Time of the Cable Vibration Dampers
by Mikhalkin, Igor K and Ponomarev, Yury K and Simakov, Oleg. B
Procedia Engineering, ISSN 1877-7058, 2017, Volume 176, Issue 6, pp. 423 - 428
This paper is dedicated to life time research regarding the cable units, which are intended for vibration protection of the tools and equipment of the... 
life-time | Vibration protection | cable vibration damper | railroad | control of parameters | Control of parameters | Railroad | Cable vibration damper | Life-time
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9. Full Text The Amphimedon queenslandica genome and the evolution of animal complexity
by Putnam, Nicholas H and Plachetzki, David C and Adamska, Maja and Goodstein, David M and Zhai, Yufeng and Gauthier, Marie E. A and Darling, Aaron and Degnan, Sandie M and Degnan, Bernard M and Calcino, Andrew and Cummins, Scott F and Vervoort, Michel and Leys, Sally P and Shu, Shengqiang and Conaco, Cecilia and Jackson, Daniel J and Hellsten, Uffe and Simakov, Oleg and Adamski, Marcin and Oakley, Todd H and Srivastava, Mansi and Harris, Christina and Dacre, Michael and Larroux, Claire and Kosik, Kenneth S and Manning, Gerard and Mitros, Therese and Rokhsar, Daniel S and Woodcroft, Ben J and Chapman, Jarrod and Fahey, Bryony and Stanke, Mario and Richards, Gemma S and Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
Nature, ISSN 0028-0836, 08/2010, Volume 466, Issue 7307, pp. 720 - 726
Sponges are an ancient group of animals that diverged from other metazoans over 600 million years ago. Here we present the draft genome sequence of Amphimedon... 
MAXIMUM-LIKELIHOOD | ORIGIN | SPONGE GEODIA-CYDONIUM | PROTEIN | SEA-ANEMONE | PHYLOGENETIC ANALYSIS | MULTIDISCIPLINARY SCIENCES | GENE REPERTOIRE | TYROSINE KINASES | METAZOAN | MONOSIGA-BREVICOLLIS | Cell Cycle - genetics | Cell Adhesion - genetics | Cell Proliferation | Genomics | Humans | Genome - genetics | Immunity, Innate - genetics | Genes - genetics | Apoptosis - genetics | Porifera - immunology | Signal Transduction - genetics | Phylogeny | Porifera - genetics | Sequence Analysis, DNA | Phosphotransferases - chemistry | Cell Polarity - genetics | Porifera - anatomy & histology | Animals | Models, Biological | Porifera - cytology | Neurons - metabolism | Phosphotransferases - genetics | Evolution, Molecular | Animal genetics | Sponges | Research | Nucleotide sequencing | Natural history | Methods | Cell division | Evolution | Genes | Cell adhesion & migration | Index Medicus | Life Sciences | Populations and Evolution | Biodiversity | Biochemistry, Molecular Biology | ANIMALS | TRANSCRIPTION FACTORS | ADHESION | IMMUNITY | DEFECTS | DIVERSIFICATION | 59 | NEOPLASMS | GERM CELLS | GENES | CELL CYCLE
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10. Full Text The Diversification of Early Emerging Metazoans: A Window into the Evolution of Animal Multicellularity
by Revilla‐i‐Domingo, Roger and Simakov, Oleg
BioEssays, ISSN 0265-9247, 05/2018, Volume 40, Issue 5, pp. e1800029 - n/a
The biannual international workshop entitled "The diversification of early emerging metazoans: A window into animal evolution?" took place at the Evangelische... 
BIOCHEMISTRY & MOLECULAR BIOLOGY | BIOLOGY | Evolution | Molecular modelling | Index Medicus
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11. Full Text Genomic Analysis of Organismal Complexity in the Multicellular Green Alga Volvox carteri
by Simon E. Prochnik and James Umen and Aurora M. Nedelcu and Armin Hallmann and Stephen M. Miller and Ichiro Nishii and Patrick Ferris and Alan Kuo and Therese Mitros and Lillian K. Fritz-Laylin and Uffe Hellsten and Jarrod Chapman and Oleg Simakov and Stefan A. Rensing and Astrid Terry and Jasmyn Pangilinan and Vladimir Kapitonov and Jerzy Jurka and Asaf Salamov and Harris Shapiro and Jeremy Schmutz and Jane Grimwood and Erika Lindquist and Susan Lucas and Igor V. Grigoriev and Rüdiger Schmitt and David Kirk and Daniel S. Rokhsar and Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
Science, ISSN 0036-8075, 7/2010, Volume 329, Issue 5988, pp. 223 - 226
The multicellular green alga Volvox carteri and its morphologically diverse close relatives (the volvocine algae) are well suited for the investigation of the... 
Somatic cells | Algae | Genomics | REPORTS | Cell division | Evolution | Genomes | Grants | Cyclins | Cells | Plant cells | MORPHOGENESIS | ORIGIN | EVOLUTION | PROTEIN | CHLAMYDOMONAS-REINHARDTII | MULTIDISCIPLINARY SCIENCES | EXTRACELLULAR-MATRIX | EUKARYOTES | DIVISION | CYTOPLASMIC BRIDGE SYSTEM | REVEALS | Protein Structure, Tertiary | Chlamydomonas reinhardtii - cytology | Extracellular Matrix Proteins - chemistry | Algal Proteins - chemistry | Species Specificity | Chlamydomonas reinhardtii - growth & development | Extracellular Matrix Proteins - genetics | Genes | Volvox - genetics | Synteny | Volvox - physiology | Molecular Sequence Data | Volvox - cytology | Sequence Analysis, DNA | Volvox - growth & development | Biological Evolution | Chlamydomonas reinhardtii - genetics | Chlamydomonas reinhardtii - physiology | DNA, Algal - genetics | Algal Proteins - genetics | Repetitive Sequences, Nucleic Acid | Genome | Algal Proteins - metabolism | Evolution, Molecular | Volvocales | Genetic aspects | Research | Proteins | Evolution & development | Chlamydomonas reinhardtii | Inventions | Complexity | Index Medicus | CAPACITY | MODIFICATIONS | ALGAE | GENES | PROTEINS | CHLAMYDOMONAS | INVENTIONS
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