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Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 2/2009, Volume 106, Issue 8, pp. 2677 - 2682
Journal Article
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, ISSN 0027-8424, 01/2005, Volume 102, Issue 3, pp. 618 - 621
We have mapped protein conformational space from two to seven residue lengths by employing multidimensional scaling on a data matrix composed of pair-wise... 
PATHWAYS | global mapping | Ramachandran map | REPRESENTATIONS | global peptide conformational mapping multidimensional scaling | MULTIDISCIPLINARY SCIENCES | Models, Molecular | Protein Conformation | Proteins - chemistry | Peptides - chemistry | Cluster Analysis | Proteins | Peptides | Biophysics | Index Medicus
Journal Article
by Sims, GE and Kim, SH
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, ISSN 0027-8424, 03/2006, Volume 103, Issue 12, pp. 4428 - 4432
A method is presented for scoring the model quality of experimental and theoretical protein structures. The structural model to be evaluated is dissected into... 
model quality assessment | PROPENSITIES | STABILITY | MULTIDISCIPLINARY SCIENCES | CONFORMATIONAL SPACE | HYPOTHESIS | protein conformational space | protein structure prediction | Models, Molecular | Protein Conformation | Proteins - chemistry | Research Design | Proteins | Models | Biophysics | Index Medicus
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 01/2005, Volume 102, Issue 3, pp. 618 - 621
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 10/2009, Volume 106, Issue 40, pp. 17077 - 17082
Ten complete mammalian genome sequences were compared by using the "feature frequency profile" (FFP) method of alignmentfree comparison. This comparison... 
Biological taxonomies | Exons | Divergent evolution | Genomics | Phylogenetics | Evolution | Genomes | Topology | Phylogeny | Mammals
Journal Article
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 3/2003, Volume 100, Issue 5, pp. 2386 - 2390
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 3/2006, Volume 103, Issue 12, pp. 4428 - 4432
A method is presented for scoring the model quality of experimental and theoretical protein structures. The structural model to be evaluated is dissected into... 
Experimentation | Mathematical vectors | Cognitive models | Databases | Modeling | Crystal structure | Model quality assessment | Protein structure prediction | Protein conformational space | Biological Sciences | protein conformational space | model quality assessment | protein structure prediction
Journal Article
Proceedings of the National Academy of Sciences, ISSN 0027-8424, 03/2006, Volume 103, Issue 12, pp. 4428 - 4432
A method is presented for scoring the model quality of experimental and theoretical protein structures. The structural model to be evaluated is dissected into... 
X-ray crystallography | Proteins | Usage | Research | Structure | Crystals
Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 1/2005, Volume 102, Issue 3, pp. 618 - 621
We have mapped protein conformational space from two to seven residue lengths by employing multidimensional scaling on a data matrix composed of pair-wise... 
Proteins | Biological Sciences | Maps | Databases | Geometric shapes | Eigenvalues | Cubes | Nucleic acids | Multidimensional scaling | Modeling | Vertices | multidimensional scaling | global mapping | Ramachandran map | global peptide conformational mapping
Journal Article
Proceedings of the National Academy of Sciences, ISSN 0027-8424, 01/2005, Volume 102, Issue 3, pp. 618 - 621
We have mapped protein conformational space from two to seven residue lengths by employing multidimensional scaling on a data matrix composed of pair-wise... 
Proteins | Research
Journal Article
08/2011
A computational method and system for the comparison and analysis of different objects of information within a database or collection. All objects are compared... 
COMPUTING | COUNTING | PHYSICS | ELECTRIC DIGITAL DATA PROCESSING | CALCULATING
Patent
04/2010
A computational method and system for the comparison and analysis of different objects of information within a database or collection. All objects are compared... 
COMPUTING | COUNTING | PHYSICS | ELECTRIC DIGITAL DATA PROCESSING | CALCULATING
Patent
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