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1. Full Text Efficient weighted univariate clustering maps outstanding dysregulated genomic zones in human cancers
by Song, Mingzhou and Zhong, Hua
Bioinformatics (Oxford, England), ISSN 1367-4803, 12/2020, Volume 36, Issue 20, pp. 5027 - 5036
Index Medicus
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2. Ckmeans.1d.dp: Optimal k-means clustering in one dimension by dynamic programming
by Wang, Haizhou and Song, Mingzhou
The R journal, ISSN 2073-4859, 2011, Volume 3, Issue 2, pp. 29 - 33
Statistics & Probability | Physical Sciences | Computer Science, Interdisciplinary Applications | Technology | Computer Science | Mathematics | Science & Technology
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3. Full Text Abstract 2293: Outstanding chromosomal expression patterning in human cancers
by Barnes, Spencer and Song, Mingzhou
Cancer research (Chicago, Ill.), ISSN 0008-5472, 07/2018, Volume 78, Issue 13 Supplement, pp. 2293 - 2293
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4. Full Text A comprehensive meta QTL analysis for fiber quality, yield, yield related and morphological traits, drought tolerance, and disease resistance in tetraploid cotton
by Said, Joseph I and Lin, Zhongxu and Zhang, Xianlong and Song, Mingzhou and Zhang, Jinfa
BMC genomics, ISSN 1471-2164, 11/2013, Volume 14, Issue 1, pp. 776 - 776
Genetics & Heredity | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Cotton Fiber | Genetic Variation | Tetraploidy | Droughts | Gossypium - genetics | Chromosome Mapping | Disease Resistance - genetics | Gossypium - growth & development | Crosses, Genetic | Quantitative Trait Loci - genetics | Textiles | Quantitative genetics | Quantitative trait loci | Genomics | Studies | Genotype & phenotype | Cotton | Chromosomes | Meta-analysis | Index Medicus
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5. Full Text Cotton QTLdb: a cotton QTL database for QTL analysis, visualization, and comparison between Gossypium hirsutum and G. hirsutum × G. barbadense populations
by Said, Joseph I and Knapka, Joseph A and Song, Mingzhou and Zhang, Jinfa
Molecular genetics and genomics : MGG, ISSN 1617-4615, 8/2015, Volume 290, Issue 4, pp. 1615 - 1625
Life Sciences | Biochemistry, general | Gossypium barbadense | Microbial Genetics and Genomics | QTL | Database | Gossypium hirsutum | Fiber quality | Cell Biology | Plant Genetics & Genomics | Animal Genetics and Genomics | CottonQTLdb | Gossypiumhirsutum | Computational Biology - methods | Phenotype | Genes, Plant - genetics | Gossypium - genetics | Databases, Genetic | Chromosome Mapping | Internet | Chromosomes, Plant - genetics | Lod Score | Crosses, Genetic | Quantitative Trait Loci - genetics | Index Medicus
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6. Full Text Cotton QTLdb: a cotton QTL database for QTL analysis, visualization, and comparison between Gossypium hirsutum and G-hirsutum x G-barbadense populations
by Said, Joseph I and Knapka, Joseph A and Song, Mingzhou and Zhang, Jinfa
Molecular genetics and genomics : MGG, ISSN 1617-4615, 08/2015, Volume 290, Issue 4, pp. 1615 - 1625
Biochemistry & Molecular Biology | Genetics & Heredity | Life Sciences & Biomedicine | Science & Technology
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7. Full Text Directional association test reveals high-quality putative cancer driver biomarkers including noncoding RNAs
by Zhong, Hua and Song, Mingzhou
BMC medical genomics, ISSN 1755-8794, 12/2019, Volume 12, Issue Suppl 7, pp. 129 - 129
Noncoding DNA | Genetic aspects | Identification and classification | Analysis | Oncogenes | Cancer | Transcription | Advantages | Myeloid leukemia | Leukemia | Biomarkers | Genomes | Breast cancer | Tumor cell lines | Gene expression | Statistics | Methods | Index Medicus | Human cancer | FunChisq | Noncoding RNA | Cancer driver gene | Non-monotonic directional association
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8. Full Text A comparative meta-analysis of QTL between intraspecific Gossypium hirsutum and interspecific G. hirsutum × G. barbadense populations
by Said, Joseph I and Said, Joseph I and Song, Mingzhou and Song, Mingzhou and Wang, Hantao and Wang, Hantao and Lin, Zhongxu and Lin, Zhongxu and Zhang, Xianlong and Zhang, Xianlong and Fang, David D and Fang, David D and Zhang, Jinfa and Zhang, Jinfa
Molecular genetics and genomics : MGG, ISSN 1617-4615, 6/2015, Volume 290, Issue 3, pp. 1003 - 1025
Life Sciences | Biochemistry, general | Quantitative trait loci | Gossypium barbadense | Meta analysis | Microbial Genetics and Genomics | Gossypium hirsutum | Cotton | Cell Biology | Plant Genetics & Genomics | Animal Genetics and Genomics | Tetraploidy | Phenotype | Genome, Plant - genetics | Species Specificity | Breeding | Gossypium - genetics | Chromosome Mapping | Chromosomes, Plant - genetics | Cluster Analysis | Quantitative Trait Loci - genetics | Index Medicus
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9. Full Text Wisdom of crowds for robust gene network inference
by Marbach, Daniel and Costello, James C and Küffner, Robert and Vega, Nicole M and Prill, Robert J and Camacho, Diogo M and Allison, Kyle R and Kellis, Manolis and Collins, James J and Aderhold, Andrej and Stolovitzky, Gustavo and Bonneau, Richard and Chen, Yukun and Cordero, Francesca and Crane, Martin and Dondelinger, Frank and Drton, Mathias and Esposito, Roberto and Foygel, Rina and De La Fuente, Alberto and Gertheiss, Jan and Geurts, Pierre and Greenfield, Alex and Grzegorczyk, Marco and Haury, Anne-Claire and Holmes, Benjamin and Hothorn, Torsten and Husmeier, Dirk and Huynh-Thu, Vân Anh and Irrthum, Alexandre and Karlebach, Guy and Lèbre, Sophie and De Leo, Vincenzo and Madar, Aviv and Mani, Subramani and Mordelet, Fantine and Ostrer, Harry and Ouyang, Zhengyu and Pandya, Ravi and Petri, Tobias and Pinna, Andrea and Poultney, Christopher S and Rezny, Serena and Ruskin, Heather J and Saeys, Yvan and Shamir, Ron and Sîrbu, Alina and Song, Mingzhou and Soranzo, Nicola and Statnikov, Alexander and Vega, Nicci and Vera-Licona, Paola and Vert, Jean-Philippe and Visconti, Alessia and Wang, Haizhou and Wehenkel, Louis and Windhager, Lukas and Zhang, Yang and Zimmer, Ralf and DREAM5 Consortium and The DREAM5 Consortium
Nature methods, ISSN 1548-7091, 08/2012, Volume 9, Issue 8, pp. 796 - 804
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Biochemical Research Methods | Science & Technology | Staphylococcus aureus - genetics | Gene Expression Regulation, Bacterial - genetics | Algorithms | Oligonucleotide Array Sequence Analysis | Escherichia coli - genetics | Saccharomyces cerevisiae - genetics | Computational Biology | Software | Transcription, Genetic - genetics | Gene Regulatory Networks | Physiological aspects | Genetic aspects | Research | Escherichia coli | Genes | Staphylococcus aureus | Genetics | Bacteria | Statistical inference | Genetic algorithms | Index Medicus
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10. Full Text A meta-analysis of quantitative trait loci for abiotic and biotic stress resistance in tetraploid cotton
by Abdelraheem, Abdelraheem and Liu, Feng and Song, Mingzhou and Zhang, Jinfa F
Molecular genetics and genomics : MGG, ISSN 1617-4615, 12/2017, Volume 292, Issue 6, pp. 1221 - 1235
Life Sciences | Biochemistry, general | Quantitative trait loci | Abiotic stress tolerance | Plant Genetics and Genomics | Biotic stress resistance | Meta analysis | Microbial Genetics and Genomics | Cotton | Cell Biology | Animal Genetics and Genomics | Biochemistry & Molecular Biology | Genetics & Heredity | Life Sciences & Biomedicine | Science & Technology | Tetraploidy | Gossypium - physiology | Chromosomes, Plant | Quantitative Trait Loci | Stress, Physiological - genetics | Gossypium - genetics | Chlorophyll | Osmotic potential | Marker-assisted selection | Hot spots | Stomata | Leaf area | Population genetics | Verticillium wilt | Meta-analysis | Genotype & phenotype | Transpiration | Plant breeding | Drought resistance | Nematodes | Conductance | Gene mapping | Index Medicus
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11. Full Text A comparative meta-analysis of QTL between intraspecific Gossypium hirsutum and interspecific G. hirsutum x G. barbadense populations
by Said, Joseph I and Song, Mingzhou and Wang, Hantao and Lin, Zhongxu and Zhang, Xianlong and Fang, David D and Zhang, Jinfa
Molecular genetics and genomics : MGG, ISSN 1617-4615, 06/2015, Volume 290, Issue 3, pp. 1003 - 1025
Biochemistry & Molecular Biology | Genetics & Heredity | Life Sciences & Biomedicine | Science & Technology | Quantitative genetics | Comparative analysis | Chromosomes | Genomics | Plant genetics
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12. Full Text Genetic analysis of Verticillium wilt resistance in a backcross inbred line population and a meta-analysis of quantitative trait loci for disease resistance in cotton
by Zhang, Jinfa and Yu, Jiwen and Pei, Wenfeng and Li, Xingli and Said, Joseph and Song, Mingzhou and Sanogo, Soum
BMC genomics, ISSN 1471-2164, 08/2015, Volume 16, Issue 1, pp. 577 - 577
Quantitative trait loci | Resistance | Root-knot nematodes | Fusarium wilt | Reniform nematodes | Cotton | Verticillium wilt | Meta-analysis | Genetics & Heredity | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Genes, Plant | Plant Diseases - microbiology | Chromosome Mapping | Genetic Markers | Gossypium - genetics | Verticillium | Gossypium - microbiology | Inbreeding | Plant Diseases - genetics | Quantitative Trait Loci | Disease Resistance - genetics | Cluster Analysis | Crosses, Genetic | Genes | Research | Index Medicus
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