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Journal of chemical theory and computation, ISSN 1549-9618, 07/2012, Volume 8, Issue 7, pp. 2506 - 2520
Refinement of empirical force fields for nucleic acids requires their extensive testing using as wide range of systems as possible. However, finding... 
Journal Article
The journal of physical chemistry letters, ISSN 1948-7185, 05/2014, Volume 5, Issue 10, pp. 1771 - 1782
We present a brief overview of explicit solvent molecular dynamics (MD) simulations of nucleic acids. We explain physical chemistry limitations of the... 
Physical Sciences | Chemistry | Materials Science | Nanoscience & Nanotechnology | Technology | Materials Science, Multidisciplinary | Science & Technology - Other Topics | Physics, Atomic, Molecular & Chemical | Chemistry, Physical | Physics | Science & Technology
Journal Article
Biochimica et biophysica acta. General subjects, ISSN 0304-4165, 05/2017, Volume 1861, Issue 5, pp. 1246 - 1263
Journal Article
Journal of chemical theory and computation, ISSN 1549-9618, 07/2012, Volume 8, Issue 7, pp. 2506 - 2520
Refinement of empirical force fields for nucleic acids requires their extensive testing using as wide range of systems as possible. However, finding... 
Physical Sciences | Chemistry | Physics, Atomic, Molecular & Chemical | Chemistry, Physical | Physics | Science & Technology
Journal Article
ISSN 2041-6520, 3/2018, Volume 9, Issue 12, pp. 3131 - 314
Cyclobutane pyrimidine dimers (CpDs) are among the most common DNA lesions occurring due to the interaction with ultraviolet light. While photolyases have been... 
Journal Article
Nucleic acids research, ISSN 0305-1048, 09/2015, Volume 43, Issue 20, pp. 9626 - 9644
DNA G-hairpins are potential key structures participating in folding of human telomeric guanine quadruplexes (GQ). We examined their properties by standard MD... 
Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Telomere - chemistry | DNA - chemistry | Cations - chemistry | Humans | Oxytricha - genetics | G-Quadruplexes | Molecular Dynamics Simulation | Index Medicus | Computational Biology
Journal Article
Nature communications, ISSN 2041-1723, 02/2018, Volume 9, Issue 1, pp. 825 - 12
..., Petr Rathner2, Peter Stathopulos3, Mitsu Ikura4,5, Norbert Müller 2,6 & Christoph Romanin 1 STIM1 and Orai1 are key components of the Ca2+-release activated Ca2... 
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Calcium - metabolism | Dyslexia - metabolism | Humans | Dyslexia - pathology | Green Fluorescent Proteins - genetics | Calcium - chemistry | ORAI1 Protein - chemistry | Migraine Disorders - pathology | Stromal Interaction Molecule 1 - chemistry | Neoplasm Proteins - genetics | Binding Sites | Blood Platelet Disorders - genetics | ORAI1 Protein - metabolism | Amino Acid Sequence | Gene Expression | Models, Molecular | Recombinant Proteins - chemistry | Neoplasm Proteins - chemistry | Patch-Clamp Techniques | Migraine Disorders - genetics | Miosis - pathology | Luminescent Proteins - genetics | Muscle Fatigue - genetics | Miosis - metabolism | Blood Platelet Disorders - pathology | Ichthyosis - metabolism | Protein Multimerization | Erythrocytes, Abnormal - metabolism | Neoplasm Proteins - metabolism | Stromal Interaction Molecule 1 - genetics | Migraine Disorders - metabolism | Ichthyosis - pathology | Miosis - genetics | HEK293 Cells | Ichthyosis - genetics | Ion Transport | Protein Interaction Domains and Motifs | Spleen - pathology | Genes, Reporter | Recombinant Proteins - metabolism | Green Fluorescent Proteins - metabolism | Protein Conformation, alpha-Helical | ORAI1 Protein - genetics | Bacterial Proteins - genetics | Gene Expression Regulation | Recombinant Proteins - genetics | Spleen - abnormalities | Dyslexia - genetics | Point Mutation | Stromal Interaction Molecule 1 - metabolism | Erythrocytes, Abnormal - pathology | Spleen - metabolism | Protein Binding | Bacterial Proteins - metabolism | Blood Platelet Disorders - metabolism | Amino Acid Substitution | Luminescent Proteins - metabolism | Calcium channels | STIM1 protein | Activation | Exposure | Orai1 protein | Elongation | Calcium ions | Index Medicus
Journal Article
Journal of chemical theory and computation, ISSN 1549-9618, 10/2018, Volume 14, Issue 10, pp. 5011 - 5026
Journal Article
The journal of physical chemistry. B, ISSN 1520-6106, 03/2016, Volume 120, Issue 11, pp. 2899 - 2912
The self-assembly and stability of DNA G-quadruplexes (GQs) are affected by the intrinsic stability of different GpG base steps embedded in their G-quartet... 
Physical Sciences | Chemistry | Chemistry, Physical | Science & Technology | G-Quadruplexes | Guanine - chemistry | Humans | Surface Properties | Molecular Dynamics Simulation | Index Medicus | Self assembly | Stability | Computer simulation | Computation | Trajectories | Dynamical systems | Stems | Free energy
Journal Article