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BMC Bioinformatics, ISSN 1471-2105, 03/2018, Volume 19, Issue 1, pp. 86 - 86
Journal Article
BMC Molecular Biology, ISSN 1471-2199, 03/2018, Volume 19, Issue 1, pp. 5 - 5
Background: BATF family transcription factors (BATF, BATF2 and BATF3) form hetero-trimers with JUNB and either IRF4 or IRF8 to regulate cell fate in T cells... 
Specificity | Transcription factors | IRF | JUNB | BATF | TRANSFORMATION | BINDING-SPECIFICITY | LEUCINE-ZIPPER | RECOGNITION | BIOCHEMISTRY & MOLECULAR BIOLOGY | TRANSCRIPTION | AP-1 | MNT PROTEIN | AFFINITY | REPRESSOR | B-ATF | Index Medicus
Journal Article
Quantitative Biology, ISSN 2095-4689, 06/2013, Volume 1, Issue 2, pp. 115 - 130
The specificity of protein-DNA interactions is most commonly modeled using position weight matrices (PWMs). First introduced in 1982, they have been adapted to... 
Consensus Sequence | Binding Energy | Binding Probability | Ribosome Binding Site | Transcription Factor Binding Site
Journal Article
Immunity, ISSN 1074-7613, 06/2014, Volume 40, Issue 6, pp. 896 - 909
Animal host defense against infection requires the expression of defense genes at the right place and the right time. Understanding such tight control of host... 
LIFE-SPAN | IMMUNE-RESPONSE | PATHOGEN INTERACTIONS | CAENORHABDITIS-ELEGANS | DROSOPHILA-MELANOGASTER | AUTOPHAGY GENES | REGULATES AUTOPHAGY | STAPHYLOCOCCUS-AUREUS | IMMUNOLOGY | C. ELEGANS | LYSOSOMAL BIOGENESIS | Pseudomonas aeruginosa - immunology | Caenorhabditis elegans - microbiology | Transcriptional Activation - genetics | Caenorhabditis elegans Proteins - immunology | Salmonella Infections - immunology | Transcriptional Activation - immunology | Autophagy - immunology | Signal Transduction - immunology | RNA Interference | Autophagy - genetics | Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - immunology | Macrophages - immunology | Enterococcus faecalis - immunology | Basic Helix-Loop-Helix Transcription Factors - genetics | Staphylococcal Infections - immunology | Immunity, Innate | Caenorhabditis elegans - immunology | Pseudomonas Infections - immunology | Animals | Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - genetics | Salmonella enterica - immunology | Basic Helix-Loop-Helix Transcription Factors - immunology | Staphylococcus aureus - immunology | Mice | RNA, Small Interfering | Caenorhabditis elegans Proteins - genetics | Genetic aspects | Genetic transcription | Analysis | Gastrointestinal diseases | Genes | Genomics | Signal transduction | Transcription factors | Nematodes | Staphylococcus infections | Kinases | Mammals | Gene expression | Experiments | Autophagy | Chemokines | Index Medicus
Journal Article
Briefings in Functional Genomics, ISSN 2041-2649, 01/2015, Volume 14, Issue 1, p. 30
  The specificity of protein-DNA interactions can be determined directly by sequencing the bound and unbound fractions in a standard binding reaction. The... 
Proteins | Accuracy | Deoxyribonucleic acid--DNA | Binding sites | Weight
Journal Article
Current Protocols in Bioinformatics, ISSN 1934-3396, 2013, Volume 43, Issue 43, p. 12.1.1
This unit briefly describes the two fundamentally different methods for predicting RNA structures. The first is to find that structure with the minimum free... 
Minimum free energy structure prediction | RNA interference | Comparative structure prediction | Non-coding RNA genes | RNA sequence and structure | Sequence Analysis, RNA - methods | Thermodynamics | RNA Interference | Base Sequence | MicroRNAs - genetics | Nucleic Acid Conformation | RNA, Untranslated - genetics
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 1/2012, Volume 40, Issue D1, pp. D162 - D168
Journal Article