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1. Full Text Treatment correlates of successful outcomes in pulmonary multidrug-resistant tuberculosis: an individual patient data meta-analysis
by Ahmad, Nafees and Ahuja, Shama D and Akkerman, Onno W and Alffenaar, Jan-Willem C and Anderson, Laura F and Baghaei, Parvaneh and Bang, Didi and Barry, Pennan M and Bastos, Mayara L and Behera, Digamber and Benedetti, Andrea and Bisson, Gregory P and Boeree, Martin J and Bonnet, Maryline and Brode, Sarah K and Brust, James C M and Cai, Ying and Caumes, Eric and Cegielski, J Peter and Centis, Rosella and Chan, Pei-Chun and Chan, Edward D and Chang, Kwok-Chiu and Charles, Macarthur and Cirule, Andra and Dalcolmo, Margareth Pretti and D'Ambrosio, Lia and de Vries, Gerard and Dheda, Keertan and Esmail, Aliasgar and Flood, Jennifer and Fox, Gregory J and Fréchet-Jachym, Mathilde and Fregona, Geisa and Gayoso, Regina and Gegia, Medea and Gler, Maria Tarcela and Gu, Sue and Guglielmetti, Lorenzo and Holtz, Timothy H and Hughes, Jennifer and Isaakidis, Petros and Jarlsberg, Leah and Kempker, Russell R and Keshavjee, Salmaan and Khan, Faiz Ahmad and Kipiani, Maia and Koenig, Serena P and Koh, Won-Jung and Kritski, Afranio and Kuksa, Liga and Kvasnovsky, Charlotte L and Kwak, Nakwon and Lan, Zhiyi and Lange, Christoph and Laniado-Laborín, Rafael and Lee, Myungsun and Leimane, Vaira and Leung, Chi-Chiu and Leung, Eric Chung-Ching and Li, Pei Zhi and Lowenthal, Phil and Maciel, Ethel L and Marks, Suzanne M and Mase, Sundari and Mbuagbaw, Lawrence and Migliori, Giovanni B and Milanov, Vladimir and Miller, Ann C and Mitnick, Carole D and Modongo, Chawangwa and Mohr, Erika and Monedero, Ignacio and Nahid, Payam and Ndjeka, Norbert and O'Donnell, Max R and Padayatchi, Nesri and Palmero, Domingo and Pape, Jean William and Podewils, Laura J and Reynolds, Ian and Riekstina, Vija and Robert, Jérôme and Rodriguez, Maria and Seaworth, Barbara and Seung, Kwonjune J and Schnippel, Kathryn and Shim, Tae Sun and Singla, Rupak and Smith, Sarah E and Sotgiu, Giovanni and Sukhbaatar, Ganzaya and Tabarsi, Payam and Tiberi, Simon and Trajman, Anete and Trieu, Lisa and Udwadia, Zarir F and van der Werf, Tjip S and Veziris, Nicolas and Viiklepp, Piret and ... and Collaborative Grp Meta-Analysis In and Collaborative Group for the Meta-Analysis of Individual Patient Data in MDR-TB treatment–2017
The Lancet, ISSN 0140-6736, 09/2018, Volume 392, Issue 10150, pp. 821 - 834
Treatment outcomes for multidrug-resistant tuberculosis remain poor. We aimed to estimate the association of treatment success and death with the use of... 
DRUG | SURGERY | SOUTH-AFRICA | BEDAQUILINE | MEDICINE, GENERAL & INTERNAL | HIGH-RATES | MANAGEMENT | SAFETY | XDR-TB | REGIMENS | PROGRAM | Clofazimine - therapeutic use | Recurrence | Tuberculosis, Multidrug-Resistant - mortality | Linezolid - therapeutic use | Humans | Fluoroquinolones - therapeutic use | Tuberculosis, Pulmonary - drug therapy | Kanamycin - therapeutic use | Moxifloxacin | Capreomycin - therapeutic use | Amikacin - therapeutic use | Carbapenems - therapeutic use | Tuberculosis, Pulmonary - mortality | Diarylquinolines - therapeutic use | Treatment Failure | Antitubercular Agents - administration & dosage | Levofloxacin - therapeutic use | Drug Therapy, Combination | Antitubercular Agents - therapeutic use | Tuberculosis, Multidrug-Resistant - drug therapy | Drug resistance in microorganisms | Care and treatment | Tuberculosis | Patient outcomes | Analysis | Drugs | Fluoroquinolones | Linezolid | Levofloxacin | Amikacin | Medical services | Clinical trials | Systematic review | Drug resistance | Success | Clinical outcomes | Literature reviews | Heterogeneity | Kanamycin | Data analysis | Clofazimine | Adjustment | Mortality | Data processing | Thorax | Regression analysis | Disease control | Patients | Capreomycin | Meta-analysis | Studies | Multidrug resistant organisms | Infectious diseases | Adults | Respiration | Carbapenems
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2. Full Text A Comparative Study Between HRCT Findings of Invasive Pulmonary Aspergillosis with Serum and Bronchoalveolar Lavage Galactomannan and Fungal Culture in Lung-Heart Transplant Recipients
by Khayatzadeh, Homa and Mehrian, Payam and Tabarsi, Payam
Iranian Journal of Radiology, ISSN 1735-1065, 04/2017, Volume Special iss, Issue 5
Background: Due to the impact of threats on the clinical outcome and survival of the lung-heart transplant recipients, such as invasive pulmonary... 
Heart | High resolution | Laboratories | Ground-based observation | Patients | Fungi | Demographics | Consolidation | Computed tomography | Bronchoalveolar lavage | Radiology | Infiltration | Health risk assessment | Culture | Thickening
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3. Full Text An adult autosomal recessive chronic granulomatous disease patient with pulmonary Aspergillus terreus infection
by Mortaz, Esmaeil and Sarhifynia, Somayeh and Marjani, Majid and Moniri, Afshin and Mansouri, Davood and Mehrian, Payam and van Leeuwen, Karin and Roos, Dirk and Garssen, Johan and Adcock, Ian M and Tabarsi, Payam
BMC infectious diseases, ISSN 1471-2334, 2018, Volume 18, Issue 1, pp. 552 - 6
Background: Genetic mutations that reduce intracellular superoxide production by granulocytes causes chronic granulomatous disease (CGD). These patients suffer... 
Aspergillus terreus | CGD | Pulmonary infection | DIAGNOSIS | INFECTIOUS DISEASES | INVASIVE ASPERGILLOSIS | GENE | ACUTE LYMPHOBLASTIC-LEUKEMIA | VERTEBRAL OSTEOMYELITIS | IDENTIFICATION | Neutrophils - cytology | Reactive Oxygen Species - metabolism | Tetradecanoylphorbol Acetate - pharmacology | Humans | Male | Tomography, X-Ray Computed | DNA, Fungal - chemistry | Lung - diagnostic imaging | DNA, Fungal - isolation & purification | Granulomatous Disease, Chronic - complications | Adrenal Cortex Hormones - therapeutic use | Bronchoalveolar Lavage Fluid - microbiology | Respiratory Tract Infections - microbiology | DNA Mutational Analysis | Base Sequence | Aspergillus - isolation & purification | Adult | Aspergillus - genetics | Respiratory Tract Infections - complications | Neutrophils - metabolism | Granulomatous Disease, Chronic - diagnosis | Neutrophils - drug effects | Respiratory Tract Infections - diagnosis | DNA, Fungal - metabolism | Granulomatous Disease, Chronic - drug therapy | Rhodamines - analysis | Chronic granulomatous disease | Usage | Corticosteroids | Gene mutations | Adults | Genetic aspects | Diagnosis | Research | Health aspects | Reactive oxygen species | Substance abuse treatment | Respiratory function | Laboratories | Chronic infection | Infections | Epidemiology | Gene sequencing | Fungi | Consolidation | Granulocytes | Bronchoalveolar lavage | Peripheral blood | Neck | Children | Alveoli | Deoxyribonucleic acid--DNA | Bacterial infections | Hematology | Sarcoidosis | Pulmonary arteries | Medical treatment | Lung diseases | Neutrophils | Weight loss | Bronchus | Superoxide | Leukocytes (neutrophilic) | Patients | Fever | Lymphadenopathy | Tuberculosis | Radiographs | Mutation | Leukocytes (granulocytic) | Acetic acid | Phorbol 12-myristate 13-acetate | DNA sequencing
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4. Full Text Cancers related to immunodeficiencies : Update and perspectives
by Mortaz, Esmaeil and Tabarsi, Payam and Mansouri, Davod and Khosravi, Adnan and Garssen, Johan and Velayati, Aliakbar and Adcock, Ian M
Frontiers in Immunology, ISSN 1664-3224, 09/2016, Volume 7, Issue SEP, p. 365
The life span of patients with primary and secondary immunodeficiency is increasing due to recent improvements in therapeutic strategies. While the incidence... 
Malignancy | Immunology | Immunology and Allergy | Primary immunodeficiency | malignancy | WISKOTT-ALDRICH-SYNDROME | FAMILIAL HEMOPHAGOCYTIC LYMPHOHISTIOCYTOSIS | COMMON VARIABLE IMMUNODEFICIENCY | IMMUNOLOGY | CHRONIC MUCOCUTANEOUS CANDIDIASIS | INTERNATIONAL-UNION | HUMAN IL-17 IMMUNITY | HYPER-IGE SYNDROME | SOCIETIES EXPERT COMMITTEE | primary immunodeficiency | PERFORIN GENE-MUTATIONS | ATAXIA-TELANGIECTASIA | Physiological aspects | Immune response | Observations | Cancer | CVID | CGD | SCID | malignancym
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5. Full Text Multidrug Resistant Pulmonary Tuberculosis Treatment Regimens and Patient Outcomes: An Individual Patient Data Meta-analysis of 9,153 Patients
by Ahuja, Shama D and Ashkin, David and Avendano, Monika and Banerjee, Rita and Bauer, Melissa and Bayona, Jamie N and Becerra, Mercedes C and Benedetti, Andrea and Burgos, Marcos and Centis, Rosella and Chan, Eward D and Chiang, Chen-Yuan and Cox, Helen and D'Ambrosio, Lia and DeRiemer, Kathy and Dung, Nguyen Huy and Enarson, Donald and Falzon, Dennis and Flanagan, Katherine and Flood, Jennifer and Garcia-Garcia, Maria L and Gandhi, Neel and Granich, Reuben M and Hollm-Delgado, Maria G and Holtz, Timothy H and Iseman, Michael D and Jarlsberg, Leah G and Keshavjee, Salmaan and Kim, Hye-Ryoun and Koh, Won-Jung and Lancaster, Joey and Lange, Christophe and de Lange, Wiel C. M and Leimane, Vaira and Leung, Chi Chiu and Li, Jiehui and Menzies, Dick and Migliori, Giovanni B and Mishustin, Sergey P and Mitnick, Carole D and Narita, Masa and O'Riordan, Philly and Pai, Madhukar and Palmero, Domingo and Park, Seung-kyu and Pasvol, Geoffrey and Peña, Jose and Pérez-Guzmán, Carlos and Quelapio, Maria I. D and Ponce-de-Leon, Alfredo and Riekstina, Vija and Robert, Jerome and Royce, Sarah and Schaaf, H. Simon and Seung, Kwonjune J and Shah, Lena and Shim, Tae Sun and Shin, Sonya S and Shiraishi, Yuji and Sifuentes-Osornio, José and Sotgiu, Giovanni and Strand, Matthew J and Tabarsi, Payam and Tupasi, Thelma E and van Altena, Robert and van der Walt, Martie and van der Werf, Tjip S and Vargas, Mario H and Viiklepp, Pirett and Westenhouse, Janice and Yew, Wing Wai and Yim, Jae-Joon and Collaborative Grp Meta-Anal and Collaborative Group for Meta-Analysis of Individual Patient Data in MDR-TB
PLoS Medicine, ISSN 1549-1277, 08/2012, Volume 9, Issue 8, p. e1001300
Background: Treatment of multidrug resistant tuberculosis (MDR-TB) is lengthy, toxic, expensive, and has generally poor outcomes. We undertook an individual... 
STANDARDIZED REGIMENS | PHILIPPINES | MEDICINE, GENERAL & INTERNAL | FOLLOW-UP | SHORT-COURSE CHEMOTHERAPY | DOTS-PLUS | COHORT | DRUG-RESISTANCE | INTERVENTION | PROGRAM | Patient outcomes | Pulmonary tuberculosis | Physiological aspects | Research | Drug therapy | Drug resistance | Health aspects | Meta-analysis | Studies | Clinical trials | Tuberculosis
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6. Full Text ISG15 deficiency and increased viral resistance in humans but not mice
by Speer, Scott D and Li, Zhi and Buta, Sofija and Payelle-Brogard, Béatrice and Qian, Li and Vigant, Frederic and Rubino, Erminia and Gardner, Thomas J and Wedeking, Tim and Hermann, Mark and Duehr, James and Sanal, Ozden and Tezcan, Ilhan and Mansouri, Nahal and Tabarsi, Payam and Mansouri, Davood and Francois-Newton, Véronique and Daussy, Coralie F and Rodriguez, Marisela R and Lenschow, Deborah J and Freiberg, Alexander N and Tortorella, Domenico and Piehler, Jacob and Lee, Benhur and García-Sastre, Adolfo and Pellegrini, Sandra and Bogunovic, Dusan
Nature Communications, ISSN 2041-1723, 05/2016, Volume 7, Issue 1, p. 11496
ISG15 is an interferon (IFN)-α/β-induced ubiquitin-like protein. It exists as a free molecule, intracellularly and extracellularly, and conjugated to target... 
Cell Line | Cytokines | Interferons | Humans | Gene Expression Regulation | Life Sciences | Animals | Immunology | Ubiquitins | Female | Genetics | Mice | Primary Cell Culture | Ubiquitin Thiolesterase | Virus Diseases
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7. Full Text Interaction of Pattern Recognition Receptors with Mycobacterium Tuberculosis
by Mortaz, Esmaeil and Mortaz, Esmaeil and Adcock, Ian M and Adcock, Ian M and Tabarsi, Payam and Tabarsi, Payam and Masjedi, Mohammad Reza and Masjedi, Mohammad Reza and Mansouri, Davood and Mansouri, Davood and Velayati, Ali Akbar and Velayati, Ali Akbar and Casanova, Jean-Laurent and Casanova, Jean-Laurent and Barnes, Peter J and Barnes, Peter J
Journal of Clinical Immunology, ISSN 0271-9142, 1/2015, Volume 35, Issue 1, pp. 1 - 10
Tuberculosis (TB) is considered a major worldwide health problem with 10 million new cases diagnosed each year. Our understanding of TB immunology has become... 
Medical Microbiology | Biomedicine | Immunology | Tuberculosis | inflammasome | Infectious Diseases | Internal Medicine | TLRs | C-REACTIVE PROTEIN | BACTERIAL-INFECTIONS | DENDRITIC CELLS | ANHIDROTIC ECTODERMAL DYSPLASIA | IMMUNOLOGY | PATHOGEN RECOGNITION | LONG PENTRAXIN PTX3 | TOLL-LIKE RECEPTORS | HOST-DEFENSE | PULMONARY TUBERCULOSIS | INNATE IMMUNITY | Reactive Oxygen Species - metabolism | Cytokines - metabolism | Humans | Mycobacterium tuberculosis - immunology | Tuberculosis - etiology | Immunity, Innate | Mycobacterium tuberculosis - pathogenicity | Tuberculosis - immunology | Receptors, Pattern Recognition - metabolism | Signal Transduction - immunology | Models, Immunological | Animals | C-Reactive Protein - metabolism | Inflammasomes - immunology | Mice | Serum Amyloid P-Component - metabolism | Toll-Like Receptors - metabolism | Tuberculosis - metabolism | Lectins | Immunotherapy | Key Review
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8. Full Text An adult autosomal recessive chronic granulomatous disease patient with pulmonary Aspergillus terreus infection
by Mortaz, Esmaeil and Sarhifynia, Somayeh and Marjani, Majid and Moniri, Afshin and Mansouri, Davood and Mehrian, Payam and van Leeuwen, Karin and Roos, Dirk and Garssen, Johan and Adcock, Ian M and Tabarsi, Payam
BMC Infectious Diseases, ISSN 1471-2334, 11/2018, Volume 18, Issue 1, p. 552
BACKGROUND: Genetic mutations that reduce intracellular superoxide production by granulocytes causes chronic granulomatous disease (CGD). These patients suffer... 
Aspergillus terreus | CGD | Pulmonary infection
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9. Full Text Emergence of new forms of totally drug-resistant tuberculosis bacilli: Super extensively drug-resistant tuberculosis or totally drug-resistant strains in Iran
by Velayati, Ali Akbar and Masjedi, Mohammad Reza and Farnia, Parissa and Tabarsi, Payam and Ghanavi, Jalladein and ZiaZarifi, Abol Hassan and Hoffner, Sven Eric
Chest, ISSN 0012-3692, 08/2009, Volume 136, Issue 2, pp. 420 - 425
Background: The study documented the emergence of new forms of resistant bacilli (totally drug-resistant [TDR] or super extensively drug-resistant [XDR]... 
MYCOBACTERIUM-TUBERCULOSIS | GENETIC DIVERSITY | RESPIRATORY SYSTEM | CRITICAL CARE MEDICINE | Age Distribution | Follow-Up Studies | Humans | Middle Aged | Drug Resistance, Bacterial | Male | Mycobacterium tuberculosis - drug effects | Incidence | Tuberculosis, Multidrug-Resistant - diagnosis | Microbial Sensitivity Tests | Young Adult | Communicable Diseases, Emerging - drug therapy | Adult | Female | Severity of Illness Index | Extensively Drug-Resistant Tuberculosis - drug therapy | Antitubercular Agents - pharmacology | Probability | Communicable Diseases, Emerging - diagnosis | Communicable Diseases, Emerging - epidemiology | Tuberculosis, Multidrug-Resistant - epidemiology | Mycobacterium tuberculosis - isolation & purification | Extensively Drug-Resistant Tuberculosis - epidemiology | Survival Analysis | Antitubercular Agents - administration & dosage | Sex Distribution | Developing Countries | Extensively Drug-Resistant Tuberculosis - diagnosis | Iran - epidemiology | Cohort Studies | Tuberculosis, Multidrug-Resistant - drug therapy | Tuberculosis | Diagnosis | Research | Demographic aspects | Distribution
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10. Full Text Implementing tuberculosis close-contact investigation in a Tertiary Hospital in Iran
by Shamaei, Masoud and Esmaeili, Shahrbanoo and Marjani, Majid and Tabarsi, Payam
International Journal of Preventive Medicine, ISSN 2008-7802, 05/2018, Volume 9, Issue 1, pp. 48 - 48
Close contact investigation is the essential key in tuberculosis (TB) case finding and an effective strategy for TB control program within any society. In this... 
Contact investigation | Tuberculosis | Passive case finding | Prevention | Contact tracing | Management | Methods | Risk factors | Infection control | Bacilli | Signs and symptoms | Parameters | Infections | Family medical history | Gender | Medical diagnosis | Patients | Cavitation | Developing countries--LDCs | Radiography | Studies | Demographics | Family size | Hospitals | Womens health | Human immunodeficiency virus--HIV | Sputum | Smear | Lesions | passive case finding | tuberculosis
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11. Full Text Association of Mycobacterium infections in patients with Mendelian susceptibility to mycobacterial disease with venous thromboembolism
by Alinejad Dizaj, Maryam and Mahdaviani, Seyed Alireza and Tabarsi, Payam and Ahari, Hamed and Ebrahimi, Ahmad and Nadji, Seyed Alireza and Emami, Habib and Mortaz, Esmaeil
Microbiology and Immunology, ISSN 0385-5600, 10/2016, Volume 60, Issue 10, pp. 678 - 686
ABSTRACT An association between a hypercoagulable state and Mendelian susceptibility to mycobacterial disease (MSMD) has been established in a few studies;... 
MTHFR A1298C | MTHFR C677T | TNF‐α | Mendelian susceptibility to mycobacterial disease | TNF-α | GAMMA | POLYMORPHISMS | THROMBOSIS | INTERLEUKIN-12 | MTHFR | MICROBIOLOGY | IMMUNOLOGY | TNF | DEFICIENCY | Leukocytes, Mononuclear - metabolism | Recurrence | Prevalence | Humans | Middle Aged | Child, Preschool | Male | Case-Control Studies | Young Adult | Methylenetetrahydrofolate Reductase (NADPH2) - genetics | Leukocytes, Mononuclear - immunology | Venous Thromboembolism - complications | Adult | Female | Odds Ratio | Child | Cytokines - blood | Mycobacterium Infections - epidemiology | Venous Thromboembolism - immunology | Genetic Predisposition to Disease | Mycobacterium Infections - etiology | Cytokines - metabolism | Genetic Association Studies | Gene Frequency | Genotype | Phenotype | Venous Thromboembolism - genetics | Adolescent | Aged | Factor V - genetics | Polymorphism, Single Nucleotide | Mutation | Tuberculosis | Bacterial infections | Analysis | Thrombin | Genetics | Disease susceptibility | Thromboembolism | Enzyme-linked immunosorbent assay | Infections
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12. Full Text Bovis Bacillus Calmette-Guerin (BCG) infection induces exosomal miRNA release by human macrophages
by Alipoor, Shamila D and Mortaz, Esmaeil and Tabarsi, Payam and Farnia, Parissa and Mirsaeidi, Mehdi and Garssen, Johan and Movassaghi, Masoud and Adcock, Ian M
Journal of Translational Medicine, ISSN 1479-5876, 2017, Volume 15, Issue 1, pp. 105 - 9
BACKGROUND: Tuberculosis (TB) remains a significant global health concern and its diagnosis is challenging due to the limitations in the specificity and... 
Mycobacterium | miRNA | Biomarker | Exosome | Macrophage | MiRNA | MYCOBACTERIUM-TUBERCULOSIS | MEDICINE, RESEARCH & EXPERIMENTAL | DIAGNOSIS | CELLS | HOST | BIOMARKERS | EXTRACELLULAR VESICLES | METABOLISM | PROTEOMIC ANALYSIS | EXPRESSION | MICRORNA | Exosomes - metabolism | Macrophages - metabolism | Humans | Cell Survival - genetics | MicroRNAs - metabolism | Gene Expression Profiling | Mycobacterium bovis - physiology | Signal Transduction - genetics | Macrophages - microbiology | Exosomes - ultrastructure | Cell culture | Surgical implants | Energy metabolism | Disease | Pathogenesis | Lipids | Infections | Exosomes | Macrophages | Tissues | Blood | Vesicles | Biomedical materials | Functional anatomy | Pathways | Network analysis | Peripheral blood | Biocompatibility | Diagnosis | Public health | Pathogens | Bacterial infections | Human body | Health | BCG | Tools | Metabolism | Ribonucleic acid--RNA | Diseases | Body fluids | Sensitivity | Monocytes | Tuberculosis | MicroRNAs | Diagnostic software | Biomarkers | Diagnostic systems | Protocol (computers)
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