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Lancet Infectious Diseases, The, ISSN 1473-3099, 2016, Volume 16, Issue 10, pp. 1185 - 1192
Journal Article
The Lancet Infectious Diseases, ISSN 1473-3099, 06/2018, Volume 18, Issue 6, pp. 675 - 683
Journal Article
ISSN 1472-9792, 05/2018, Volume 110, p. 52
More and more Single Nucleotide Polymosrphisms of interest among pathogenic organisms are described with the advent of Whole Genome Sequencing but WGS approach... 
Global health | Genomes | Single-nucleotide polymorphism | Hybridization | Developing countries--LDCs | Gene sequencing | Tuberculosis | Bridge construction | RpoB protein | Bacteria | Mutation | Deoxyribonucleic acid--DNA | Polymorphism
Journal Article
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, ISSN 0066-4804, 09/2019, Volume 63, Issue 9
We report on the first six cases of acquired resistance to bedaquiline in Pakistan. Seventy sequential isolates from 30 drug-resistant-tuberculosis patients on... 
multidrug resistance | clofazimine | antibiotic resistance | whole-genome sequencing | XDR | tuberculosis | SUSCEPTIBILITY | MICROBIOLOGY | PHARMACOLOGY & PHARMACY | bedaquiline
Journal Article
by Allix-Béguec, Caroline and Arandjelovic, Irena and Bi, Lijun and Beckert, Patrick and Bonnet, Maryline and Bradley, Phelim and Cabibbe, Andrea M and Cancino-Muñoz, Irving and Caulfield, Mark J and Chaiprasert, Angkana and Cirillo, Daniela M and Clifton, David A and Comas, Iñaki and Crook, Derrick W and De Filippo, Maria R and de Neeling, Han and Diel, Roland and Drobniewski, Francis A and Faksri, Kiatichai and Farhat, Maha R and Fleming, Joy and Fowler, Philip and Fowler, Tom A and Gao, Qian and Gardy, Jennifer and Gascoyne-Binzi, Deborah and Gibertoni-Cruz, Ana-Luiza and Gil-Brusola, Ana and Golubchik, Tanya and Gonzalo, Ximena and Grandjean, Louis and He, Guangxue and Guthrie, Jennifer L and Hoosdally, Sarah and Hunt, Martin and Iqbal, Zamin and Ismail, Nazir and Johnston, James and Khanzada, Faisal M and Khor, Chiea C and Kohl, Thomas A and Kong, Clare and Lipworth, Sam and Liu, Qingyun and Maphalala, Gugu and Martinez, Elena and Mathys, Vanessa and Merker, Matthias and Miotto, Paolo and Mistry, Nerges and Moore, David A.J and Murray, Megan and Niemann, Stefan and Ong, Rick T.-H and Peto, Tim E.A and Posey, James E and Prammananan, Therdsak and Pym, Alexander and Rodrigues, Camilla and Rodrigues, Mabel and Rodwell, Timothy and Rossolini, Gian M and Padilla, Elisabeth Sánchez and Schito, Marco and Shen, Xin and Shendure, Jay and Sintchenko, Vitali and Sloutsky, Alex and Smith, E. Grace and Snyder, Matthew and Soetaert, Karine and Starks, Angela M and Supply, Philip and Suriyapol, Prapat and Tahseen, Sabira and Tang, Patrick and Teo, Yik-Ying and Thuong, Thuong N.T and Thwaites, Guy and Tortoli, Enrico and Omar, Shaheed V and van Soolingen, Dick and Walker, A. Sarah and Walker, Timothy M and Wilcox, Mark and Wilson, Daniel J and Wyllie, David and Yang, Yang and Zhang, Hongtai and Zhao, Yanlin and Zhu, Baoli and The CRyPTIC Consortium and the 100,000 Genomes Project and CRyPTIC Consortium and 100000 Genomes Project and CRyPTIC Consortium and the 100,000 Genomes Project
The New England Journal of Medicine, ISSN 0028-4793, 10/2018, Volume 379, Issue 15, pp. 1403 - 1415
Journal Article
F1000Research, ISSN 2046-1402, 2019, Volume 8, p. 35
Background: Pakistan ranks among high tuberculosis (TB) burden countries, with about 200,000 missing TB cases. Despite significant increase in case detection... 
Journal Article
INTERNATIONAL JOURNAL OF TUBERCULOSIS AND LUNG DISEASE, ISSN 1027-3719, 08/2019, Volume 23, Issue 8, pp. 959 - 960
Journal Article
Journal Article
Bioinformatics, ISSN 1367-4803, 09/2019, Volume 35, Issue 18, pp. 3240 - 3249
Abstract Motivation Resistance co-occurrence within first-line anti-tuberculosis (TB) drugs is a common phenomenon. Existing methods based on genetic data... 
DIMENSIONALITY REDUCTION | GENE | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | INFORMATION | SUSCEPTIBILITY | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | CLASSIFICATION | DRUG-RESISTANCE | MUTATIONS | Original Papers
Journal Article
BIOINFORMATICS, ISSN 1367-4803, 07/2019, Volume 35, Issue 13, pp. 2276 - 2282
Motivation Timely identification of Mycobacterium tuberculosis (MTB) resistance to existing drugs is vital to decrease mortality and prevent the amplification... 
MYCOBACTERIUM-TUBERCULOSIS | MATRIX | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | Original Papers
Journal Article
BMC Research Notes, ISSN 1756-0500, 2011, Volume 4, Issue 1, pp. 165 - 165
Delay in diagnosis and treatment of tuberculosis (TB) may enhance the chances of morbidity and mortality and play a key role in continuous transmission of the... 
Surveys | Care and treatment | Tuberculosis | Sputum | Physiological aspects | Diagnosis | Hyperthermia | Cough | Risk factors | Fever
Journal Article
Tropical Medicine & International Health, ISSN 1360-2276, 05/2009, Volume 14, Issue 5, pp. 571 - 575
Journal Article