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Methods in Molecular Biology, ISSN 1064-3745, 08/2016, Volume 1415, pp. 211 - 223
Journal Article
Scientific Reports (Nature Publisher Group), 08/2019, Volume 9, Issue 1, pp. 1 - 12
Proteins often work as oligomers or multimers in vivo. Therefore, elucidating their oligomeric or multimeric form (quaternary structure) is crucially important... 
Interfaces | Proteins | Conserved sequence | Crystals | Quaternary structure | Classification | Amino acid sequence | Protein structure | Index Medicus
Journal Article
Bioinformatics, ISSN 1367-4803, 11/2016, Volume 32, Issue 21, pp. 3246 - 3251
Motivation: Large multiple sequence alignments (MSAs), consisting of thousands of sequences, are becoming more and more common, due to advances in sequencing... 
PROTEIN SEQUENCES | QUALITY | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | STRATEGY | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | MUSCLE | PREDICTIONS | TIME | CLUSTAL | MULTIPLE ALIGNMENT | ACCURACY | Proteins | Sequence Alignment | Software | Algorithms | Index Medicus | Original Papers
Journal Article
BMC bioinformatics, ISSN 1471-2105, 06/2017, Volume 18, Issue 1, pp. 288 - 288
Journal Article
BMC bioinformatics, 06/2017, Volume 18, Issue 1, p. 288
PSI-BLAST, an extremely popular tool for sequence similarity search, features the utilization of Position-Specific Scoring Matrix (PSSM) constructed from a... 
Amino Acid Sequence | Sequence Alignment - methods | Algorithms | Position-Specific Scoring Matrices | Area Under Curve | ROC Curve | Proteins - chemistry | Databases, Factual
Journal Article
The FEBS Journal, ISSN 1742-464X, 09/2019, Volume 286, Issue 17, pp. 3416 - 3432
Journal Article
Bioinformatics, ISSN 1367-4803, 07/2018, Volume 34, Issue 14, pp. 2490 - 2492
Abstract Summary We report an update for the MAFFT multiple sequence alignment program to enable parallel calculation of large numbers of sequences. The... 
SECONDARY STRUCTURE PREDICTION | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | Applications Notes
Journal Article
Science, ISSN 0036-8075, 09/2015, Volume 349, Issue 6255, pp. 1544 - 1548
Journal Article
Nature Communications, ISSN 2041-1723, 12/2017, Volume 8, Issue 1, pp. 1004 - 15
Gibberellin (GA) is a major hormone for plant growth and development. GA response is derived from the degradation of DELLA repressor proteins after... 
ARABIDOPSIS-THALIANA | DNA-BINDING | DOMAIN | MULTIDISCIPLINARY SCIENCES | KINASE | PROTEIN FUNCTIONS | RECEPTOR | TARGETS | TAG | IDENTIFICATION | INHIBITOR | Tyrosine | Ubiquitin | Plants (botany) | Phosphorylation | Salts | Complex formation | Gibberellins | Genistein | Germination | Giberellins | Seed germination | Proteins | Degradation | Signaling | Ubiquitination | Plant growth | Ubiquitin-protein ligase | Index Medicus
Journal Article
Bioinformatics, ISSN 1367-4803, 01/2019, Volume 35, Issue 2, pp. 309 - 318
Abstract Motivation In bioinformatics, machine learning-based methods that predict the compound-protein interactions (CPIs) play an important role in the... 
DRUG-TARGET INTERACTIONS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | CHEMOGENOMICS | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | KERNELS | Index Medicus
Journal Article