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1. Complete pipeline for Infinium® Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation
by Touleimat, Nizar and Tost, Jörg
Epigenomics, ISSN 1750-1911, 06/2012, Volume 4, Issue 3, pp. 325 - 341
evaluation | pipeline | 450K | bias correction | normalization | preprocessing | DNA methylation | Infinium® Human Methylation 450K BeadChip | Illumina | Life Sciences & Biomedicine | Genetics & Heredity | Science & Technology | Epigenomics | Oligonucleotide Array Sequence Analysis - methods | Humans | CpG Islands - genetics | DNA Methylation - genetics | Software | Genome, Human | Oligonucleotide Array Sequence Analysis - instrumentation | Automatic Data Processing | Automation, Laboratory
Journal Article
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2. Full Text A translational perspective on epigenetics in allergic diseases
by Tost, Jörg
Journal of allergy and clinical immunology, ISSN 0091-6749, 09/2018, Volume 142, Issue 3, pp. 715 - 726
epigenetic editing | antisense molecules | forkhead protein 3 | Epigenetics | DNA methylation | microRNA | allergy | asthma | biomarker | antagomirs | oligonucleotide therapy | Allergy | Immunology | Life Sciences & Biomedicine | Science & Technology | Populations | Disease | Physicians | Genes | Oligonucleotides | Microbiomes | Clinical trials | Genomes | Allergic diseases | Genotype & phenotype | Microprocessors | Education | Copyrights | Modulation | Facsimile communication | Immunotherapy | Nutrients | miRNA | Food hypersensitivity | Deoxyribonucleic acid--DNA | Medical personnel | Medical research | Food allergies | Phenotypes | Antisense oligonucleotides | Ribonucleic acid--RNA | Patients | Disease control | Environmental effects | Diseases | Asthma | Studies | Organizations | Biomarkers | Internet | Clinical medicine | Pharmaceuticals | Index Medicus | Abridged Index Medicus
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3. Full Text Current and Emerging Technologies for the Analysis of the Genome-Wide and Locus-Specific DNA Methylation Patterns
by Tost, Jörg
11/2016, Advances in Experimental Medicine and Biology, ISBN 9783319436227, Volume 945
Methylation Variable Position | Bisulfite Treatment | Bisulfite Sequencing | Amplicon Bisulfite Sequencing | Bisulfite Conversion | DNA - genetics | 5-Methylcytosine - analogs & derivatives | Epigenesis, Genetic | Humans | Genome - genetics | DNA Methylation - genetics | High-Throughput Nucleotide Sequencing - methods | Sequence Analysis, DNA | 5-Methylcytosine - chemistry
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4. Full Text Recent findings in the genetics and epigenetics of asthma and allergy
by Kabesch, Michael and Tost, Jorg
Seminars in immunopathology, ISSN 1863-2297, 02/2020, Volume 42, Issue 1, pp. 43 - 60
Pathology | Immunology | Life Sciences & Biomedicine | Science & Technology | Phenotypes | Pharmacogenetics | Hypersensitivity | Epigenetics | Genetics | Population genetics | Asthma | Index Medicus | Allergy | Review | Interaction
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5. Full Text Strengthening epithelial barriers through modulation of the histone code in allergic diseases—a novel approach for preventing the atopic march?
by Tost, Jörg
Journal of allergy and clinical immunology, ISSN 0091-6749, 09/2020, Volume 146, Issue 3, pp. 515 - 517
Atopic dermatitis | histone deacetylase inhibitor | histone deacetylases | allergy | microRNA | T-cell populations | epigenetics | Allergy | Immunology | Life Sciences & Biomedicine | Science & Technology | Index Medicus | Abridged Index Medicus
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6. DNA methylation analysis by pyrosequencing
by Tost, Jörg and Gut, Ivo G
Nature protocols, ISSN 1754-2189, 09/2007, Volume 2, Issue 9, pp. 2265 - 2275
Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Biochemical Research Methods | Science & Technology | Adaptor Proteins, Signal Transducing - chemistry | Genomic Imprinting | MutL Protein Homolog 1 | Humans | Nuclear Proteins - metabolism | Nuclear Proteins - chemistry | Sulfites - chemistry | DNA Methylation | Base Composition | Polymerase Chain Reaction | CpG Islands | Adaptor Proteins, Signal Transducing - metabolism | Sequence Analysis, DNA - methods
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7. Full Text The epigenetics of breast cancer
by Jovanovic, Jovana and Rønneberg, Jo Anders and Tost, Jörg and Kristensen, Vessela
Molecular oncology, ISSN 1574-7891, 2010, Volume 4, Issue 3, pp. 242 - 254
DNA methylation | Breast cancer | Histone modification, genomic instability | Basal-like | Tp53 | Life Sciences & Biomedicine | Oncology | Science & Technology | Chromatin - metabolism | Receptors, Estrogen - metabolism | Prognosis | Receptors, Estrogen - genetics | DNA Modification Methylases - metabolism | Epigenesis, Genetic | Humans | Gene Expression Regulation, Neoplastic | MicroRNAs - metabolism | DNA - metabolism | Breast Neoplasms - therapy | DNA - chemistry | DNA Methylation | Breast Neoplasms - genetics | Breast Neoplasms - pathology | Biomarkers, Tumor - metabolism | Female | Breast Neoplasms - diagnosis | MicroRNAs - genetics | Molecular Structure | Histones - metabolism | Chromatin - chemistry | Transcription | Genomics | Homeostasis | Genomes | Metastasis | DNA repair | Carcinogenesis | Cell adhesion & migration | Consortia | Deoxyribonucleic acid--DNA | Medical research | Phenotypes | Nucleotide sequence | Antisense RNA | Mammals | Gene expression | Polycomb group proteins | Molecular modelling | Epigenetics | Antisense DNA | Mutation | Apoptosis | Tumors | Index Medicus | Reviews | Review
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8. Full Text Overlap between differentially methylated DNA regions in blood B lymphocytes and genetic at-risk loci in primary Sjögren's syndrome
by Miceli-Richard, Corinne and Wang-Renault, Shu-Fang and Boudaoud, Saida and Busato, Florence and Lallemand, Céline and Bethune, Kevin and Belkhir, Rakiba and Nocturne, Gaétane and Mariette, Xavier and Tost, Jörg
Annals of the rheumatic diseases, ISSN 0003-4967, 05/2016, Volume 75, Issue 5, pp. 933 - 940
Life Sciences & Biomedicine | Rheumatology | Science & Technology | Severity of Illness Index | DNA Methylation - immunology | Genetic Predisposition to Disease | Genome-Wide Association Study | Humans | Middle Aged | Cells, Cultured | Sjogren's Syndrome - immunology | Male | Promoter Regions, Genetic - genetics | Case-Control Studies | CD4-Positive T-Lymphocytes - immunology | Signal Transduction - immunology | CpG Islands - genetics | Adult | B-Lymphocyte Subsets - immunology | Female | Aged | Promoter Regions, Genetic - immunology | Sjogren's Syndrome - genetics | Index Medicus | Life Sciences | Human health and pathology | Rhumatology and musculoskeletal system | T Cells | Autoantibodies | Sjøgren's Syndrome | Autoimmune Diseases | Basic and Translational Research | B cells | 1506
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