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2016, Methods in molecular biology, ISBN 1493964313, Volume 1490
Web Resource
2016, Methods in molecular biology, ISBN 1493964313, Volume 1490
Web Resource
Biochemistry, ISSN 0006-2960, 2/2019, Volume 58, Issue 8, pp. 1094 - 1108
RNA thermodynamics play an important role in determining the 2D and 3D structures of RNA. Internal loops of the sequence, 5’-GMNU/3’-UNMG, are relatively... 
Journal Article
Nucleic acids research, ISSN 0305-1048, 05/2019, Volume 47, Issue 13, pp. 7003 - 7017
The influenza A virus (IAV) is a continuous health threat to humans as well as animals due to its recurring epidemics and pandemics. The IAV genome is... 
RNA and RNA-protein complexes
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 06/2018, Volume 46, Issue 10, pp. 4883 - 4892
Journal Article
by Franke, Barbara and Stein, Jason L and Ripke, Stephan and Anttila, Verneri and Hibar, Derrek P and van Hulzen, Kimm J. E and Arias-Vasquez, Alejano and Smoller, Jordan W and Nichols, Thomas E and Neale, Michael C and McIntosh, Anew M and Lee, Phil and McMahon, Francis J and Meyer-Lindenberg, Aneas and Mattheisen, Manuel and Aneassen, Ole A and Gruber, Oliver and Sachdev, Perminder S and Roiz-Santiañez, Roberto and Saykin, Anew J and Ehrlich, Stefan and Mather, Karen A and Turner, Jessica A and Schwarz, Emanuel and Thalamuthu, Anbupalam and Yao, Yin and Ho, Yvonne Y. W and Martin, Nicholas G and Wright, Margaret J and O'Donovan, Michael C and Thompson, Paul M and Neale, Benjamin M and Medland, Sarah E and Sullivan, Patrick F and Corvin, Aiden and Walters, James T. R and Farh, Kai-How and Holmans, Peter A and Bulik-Sullivan, Brendan and Collier, David A and Huang, Hailiang and Pers, Tune H and Agartz, Ingrid and Agerbo, Esben and Albus, Margot and Alexander, Madeline and Amin, Farooq and Bacanu, Silviu A and Begemann, Martin and Belliveau, Richard A and Bene, Judit and Bergen, Sarah E and Bevilacqua, Elizabeth and Bigdeli, Tim B and Black, Donald W and Bruggeman, Richard and Buccola, Nancy G and Buckner, Randy L and Byerley, William F and Cahn, Wiepke and Cai, Guiqing and Cairns, Murray J and Campion, Dominique and Cantor, Rita M and Carr, Vaughan J and Carrera, Noa and Catts, Stanley V and Chambert, Kimberley D and Chan, Raymond C. K and Chen, Eric Y. H and Chen, Ronald Y. L and Cheng, Wei and Cheung, Eric F. C and Chong, Siow Ann and Cloninger, C. Robert and Cohen, David and Cohen, Nadine and Cormican, Paul and Craddock, Nick and Crespo-Facorro, Benedicto and Crowley, James J and Curtis, David and Davidson, Michael and Davis, Kenneth L and Degenhardt, Franziska and del Favero, Jurgen and DeLisi, Lynn E and Demontis, Ditte and Dikeos, Dimitris and Dinan, Timothy and Djurovic, Srdjan and Donohoe, Gary and peau, Elodie and Duan, Jubao and Dudbridge, Frank and Eichhammer, Peter and Eriksson, Johan and Escott-Price, Valentina and Essioux, Laurent and Fanous, Ayman H and ... and ENIGMA Consortium and Psychiat Genomics Consortium and Schizophrenia Working Group of the Psychiatric Genomics Consortium and Enigma Consortium
Nature neuroscience, ISSN 1097-6256, 2016, Volume 19, Issue 3, pp. 420 - +
Journal Article
Biochemistry, ISSN 0006-2960, 02/2019, Volume 58, Issue 8, pp. 1094 - 1108
RNA thermodynamics play an important role in determining the two- and three-dimensional structures of RNA. Internal loops of the sequence 5'-GMNU/3'-UNMG are... 
MAJOR GROOVE | RNA STRUCTURE | HYDROGEN-BOND | CRYSTAL-STRUCTURE | BIOCHEMISTRY & MOLECULAR BIOLOGY | TANDEM MISMATCHES | NMR REVEALS | ATOMIC-ACCURACY | WOBBLE PAIR | U PAIRS | THERMODYNAMIC CHARACTERIZATION
Journal Article
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, ISSN 1549-9618, 05/2010, Volume 6, Issue 5, pp. 1520 - 1531
A reparameterization of the torsional parameters for the glycosidic dihedral angle, y, for the AMBER99 force field in RNA nucleosides is used to provide a... 
NOE DIFFERENCE SPECTROSCOPY | CRYSTAL-STRUCTURE | NUCLEOSIDES | AB-INITIO | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | DYNAMICS | CHEMISTRY, PHYSICAL | CONFORMATIONAL-ANALYSIS | SIMULATION | MONO-NUCLEOTIDES | SUGAR RING | NUCLEIC-ACIDS
Journal Article
JOURNAL OF PHYSICAL CHEMISTRY B, ISSN 1520-6106, 07/2011, Volume 115, Issue 29, pp. 9261 - 9270
Accurately modeling unpaired regions of RNA is important for predicting structure, dynamics, and thermodynamics of folded RNA. Comparisons between NMR data and... 
BASE-PAIRS | LIQUID WATER | CHEMISTRY, PHYSICAL | NONEMPIRICAL AB-INITIO | CONFORMATIONAL-ANALYSIS | FREE-ENERGIES | BASIS-SET | MOLECULAR-DYNAMICS SIMULATION | SUGAR RING | DIELECTRIC MEDIUM | NUCLEIC-ACIDS | Molecular structure | Computer simulation | Ribonucleic acids | Simulation | Molecular dynamics | Mathematical models | Spectra | Nuclear magnetic resonance
Journal Article
2016, Methods in Molecular Biology, ISBN 1493964313, Volume 1490
eBook
Biochemistry, ISSN 0006-2960, 07/2017, Volume 56, Issue 29, pp. 3733 - 3744
The prediction of RNA three-dimensional structure from sequence alone has been a long-standing goal. High-resolution, experimentally determined structures of... 
Sequence Analysis, RNA - methods | Predictive Value of Tests | Software | Magnetic Resonance Spectroscopy - methods | Nucleotide Motifs | RNA - chemistry | Index Medicus
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 10/2009, Volume 38, Issue 1, pp. D280 - D282
Journal Article
BIOCHEMISTRY, ISSN 0006-2960, 07/2017, Volume 56, Issue 29, pp. 3733 - 3744
The prediction of RNA three-dimensional structure from sequence alone has been a long-standing goal. High resolution, experimentally determined structures of... 
STACKING | BASE-PAIRS | SHEARED GA | TANDEM GA PAIRS | CHEMICAL-SHIFTS | BIOCHEMISTRY & MOLECULAR BIOLOGY | SECONDARY STRUCTURE PREDICTION | 2-DIMENSIONAL NMR | CONFORMATION | ASSISTED PREDICTION | IDENTIFICATION | Usage | Nuclear magnetic resonance | RNA | Structure | Hydrogen bonding | Analysis
Journal Article
Methods in Molecular Biology, ISSN 1064-3745, 2014, Volume 1097, pp. 45 - 70
Journal Article
Biochemistry, ISSN 0006-2960, 07/2010, Volume 49, Issue 27, pp. 5817 - 5827
Thermodynamic stabilities of 2 x 2 nucleotide tandem AG internal loops in RNA range from -1.3 to +3.4 kcal/mol at 37 degrees C and are not predicted well with... 
Thermodynamics | Guanosine - chemistry | Hydrogen Bonding | Magnetic Resonance Spectroscopy | Solutions | Base Sequence | Quinoxalines | Nucleotides | RNA - chemistry | Uracil | Index Medicus
Journal Article
The New England Journal of Medicine, ISSN 0028-4793, 11/2013, Volume 369, Issue 22, pp. 2093 - 2104
Journal Article