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Nature Protocols, ISSN 1754-2189, 12/2016, Volume 11, Issue 12, pp. 2301 - 2319
MaxQuant is one of the most frequently used platforms for mass-spectrometry (MS)-based proteomics data analysis. Since its first release in 2008, it has grown... 
ACCURATE | DISSOCIATION | PEPTIDE IDENTIFICATION | QUANTIFICATION | STRATEGY | BIOCHEMICAL RESEARCH METHODS | EXPRESSION | REVEALS | Protein Processing, Post-Translational | Software | Proteomics - methods | Mass Spectrometry - methods | Mass spectrometry | Affinity labeling | Methods | Proteomics
Journal Article
Methods in Molecular Biology, ISSN 1064-3745, 2018, Volume 1711, pp. 133 - 148
Mass spectrometry-based proteomics is a continuously growing field marked by technological and methodological improvements. Cancer proteomics is aimed at... 
Software | Translational bioinformatics | Omics data analysis | Perseus | Cancer proteomics
Journal Article
PROTEOMICS, ISSN 1615-9853, 04/2015, Volume 15, Issue 8, pp. 1453 - 1456
Journal Article
Molecular Systems Biology, ISSN 1744-4292, 12/2016, Volume 12, Issue 12, pp. 901 - n/a
Journal Article
PLoS Computational Biology, ISSN 1553-734X, 01/2013, Volume 9, Issue 1, p. e1002842
Journal Article
Nature Protocols, ISSN 1754-2189, 01/2018, Volume 13, Issue 1, pp. 293 - 306
We describe a protocol for multiplexed proteomic analysis using neutron-encoded (NeuCode) stable isotope labeling of amino acids in cells (SILAC) or mice... 
ION COALESCENCE | QUANTITATIVE PROTEOMICS | SIGNATURES | AMINO-ACIDS | QUANTIFICATION | BIOCHEMICAL RESEARCH METHODS | NEUCODE LABELS | SILAC | CULTURE | MASS-SPECTROMETRY | Multiplexing | Cell culture | Peptides | Data acquisition | Amino acids | Labelling | Mass spectroscopy | Mammals | Proteins | Lysine | Lysyl endopeptidase | Coding | Endopeptidase | Stable isotopes | Mice | Mass spectrometry | Mass spectra | Isotopes | Resolution | Completion time
Journal Article
Journal Article
Nature protocols, ISSN 1754-2189, 1/2018, Volume 13, Issue 1, pp. 293 - 306
We describe a protocol for multiplexed proteomic analysis using neutron-encoded (NeuCode) stable isotope labeling of amino acids in cells (SILAC) or mice... 
Journal Article