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Plant Physiology, ISSN 0032-0889, 12/2015, Volume 169, Issue 4, pp. 2684 - 2699
Journal Article
Current Opinion in Plant Biology, ISSN 1369-5266, 04/2019, Volume 48, pp. 9 - 17
Genome annotations offer ample opportunities to study gene functions, biochemical and regulatory pathways, or quantitative trait loci in plants. Determining... 
DIVERSITY | TRANSCRIPTOME | SEQUENCE | PREDICTION | RICE | PLANT SCIENCES
Journal Article
Plant Physiology, ISSN 0032-0889, 06/2016, p. pp.00821.2016
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2015, Volume 43, Issue 1, pp. D974 - D981
Comparative sequence analysis has significantly altered our view on the complexity of genome organization and gene functions in different kingdoms. PLAZA 3.0... 
EVOLUTION | DATABASE | DRAFT GENOME | BIOCHEMISTRY & MOLECULAR BIOLOGY | SEQUENCE | ALGORITHM | GENERATION | DUPLICATION | ARABIDOPSIS | DATA SETS | RESOURCE | Plants - genetics | Genomics | Molecular Sequence Annotation | Databases, Genetic | Genome, Plant | Internet | Phylogeny | Plants - classification | Evolution, Molecular | Database Issue
Journal Article
Bioinformatics, ISSN 1367-4803, 08/2015, p. btv466
Journal Article
Nature plants, ISSN 2055-0278, 03/2019, Volume 5, Issue 3, pp. 316 - 327
The target of rapamycin (TOR) kinase is a conserved regulatory hub that translates environmental and nutritional information into permissive or restrictive... 
Journal Article
Methods in Molecular Biology, ISSN 1064-3745, 2017, Volume 1533, pp. 201 - 212
Selecting and filtering a reference expression and interaction dataset when studying specific pathways and regulatory interactions can be a very time-consuming... 
Networks | Plants | Data integration | Protein-protein interactions | Coexpression | Protein Interaction Mapping - methods | Computational Biology - methods | Plants - metabolism | Plants - genetics | Epistasis, Genetic | Genes, Plant | Gene Expression Regulation, Plant | Databases, Genetic | Software | Gene Regulatory Networks | Web Browser
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2018, Volume 46, Issue D1, pp. D1190 - D1196
Abstract PLAZA (https://bioinformatics.psb.ugent.be/plaza) is a plant-oriented online resource for comparative, evolutionary and functional genomics. The PLAZA... 
VISUALIZATION | TREE | DATABASE | VIEWER | MULTIPLE SEQUENCE ALIGNMENT | BIOCHEMISTRY & MOLECULAR BIOLOGY | Biological Evolution | User-Computer Interface | Plants - genetics | Genomics | Databases, Genetic | Crops, Agricultural - genetics | Genome, Plant | Phylogeny | Database Issue
Journal Article
Plant, Cell & Environment, ISSN 0140-7791, 10/2012, Volume 35, Issue 10, pp. 1787 - 1798
Journal Article
Plant Physiology, ISSN 0032-0889, 2/2012, Volume 158, Issue 2, pp. 590 - 600
Journal Article
Environmental Microbiology, ISSN 1462-2912, 08/2013, Volume 15, Issue 8, pp. 2147 - 2153
Journal Article
Plant Physiology, ISSN 0032-0889, 01/2012, Volume 158, Issue 2, pp. 590 - 600
With the arrival of low-cost, next-generation sequencing, a multitude of new plant genomes are being publicly released, providing unseen opportunities and... 
Journal Article
Plant Physiology, ISSN 0032-0889, 8/2016, Volume 171, Issue 4, pp. 2586 - 2598
Comparative sequence analysis delineates conserved noncoding sequences that are functionally relevant, a subset of which are conserved throughout green plants.... 
Journal Article
Bioinformatics, ISSN 1367-4803, 2017, Volume 33, Issue 18, pp. 2946 - 2947
Motivation: Comparative and evolutionary studies utilize phylogenetic trees to analyze and visualize biological data. Recently, several web-based tools for the... 
BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | TOOL | Software | Internet | Phylogeny | Genomics - methods | Sequence Analysis, DNA - methods
Journal Article
Journal Article
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