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PLoS Genetics, ISSN 1553-7404, 09/2019, Volume 15, Issue 9, p. e1008369
The Y chromosome harbors nine multi-copy ampliconic gene families expressed exclusively in testis. The gene copies within each family are >99% identical to... 
Family | Genomes | Research | Gene expression | Genes | Genomics
Journal Article
Journal of Chemical Information and Modeling, ISSN 1549-9596, 11/2013, Volume 53, Issue 11, pp. 2781 - 2791
Journal Article
by Brennan, Cameron W and Verhaak, Roel G.W and McKenna, Aaron and Campos, Benito and Noushmehr, Houtan and Salama, Sofie R and Zheng, Siyuan and Chakravarty, Debyani and Sanborn, J. Zachary and Berman, Samuel H and Beroukhim, Rameen and Bernard, Brady and Wu, Junyuan and Wu, Chang-Jiun and Genovese, Giannicola and Shmulevich, Ilya and Barnholtz-Sloan, Jill and Zou, Lihua and Vegesna, Rahulsimham and Shukla, Sachet A and Ciriello, Giovanni and Yung, W.K and Yung, W.K. Alfred and Zhang, Zhaobin and Zhang, Wei and Zhang, Jianhua and Zhang, Hailei and Sougnez, Carrie and Mikkelsen, Tom and Aldape, Kenneth and Bigner, Darell D and Bigner, Darell and Van Meir, Erwin G and Prados, Michael and Sloan, Andrew and Sloan, Andrew E and Black, Keith L and Eschbacher, Jennifer and Finocchiaro, Gaetano and Friedman, William and Andrews, David W and Guha, Abhijit and Iacocca, Mary and O’Neill, Brian P and Foltz, Greg and Myers, Jerome and Weisenberger, Daniel J and Penny, Robert and Kucherlapati, Raju and Perou, Charles M and Hayes, D. Neil and Gibbs, Richard and Marra, Marco and Mills, Gordon and Mills, Gordon B and Lander, Eric S and Lander, Eric and Spellman, Paul and Wilson, Richard K and Wilson, Richard and Sander, Chris and Weinstein, John N and Weinstein, John and Meyerson, Matthew and Gabriel, Stacey B and Gabriel, Stacey and Laird, Peter W and Haussler, David and Getz, Gad and Chin, Lynda and Benz, Christopher and Barrett, Wendi and Ostrom, Quinn and Wolinsky, Yingli and Bose, Bikash and Boulos, Madgy and Boulos, Paul T and Brown, Jenn and Czerinski, Christine and Eppley, Matthew and Kempista, Thelma and Kitko, Teresa and Koyfman, Yakov and Rabeno, Brenda and Rastogi, Pawan and Sugarman, Michael and Swanson, Patricia and Yalamanchii, Kennedy and Otey, Ilana P and Liu, Yuexin and Liu, Yingchun Spring and Liu, Wenbin and Xiao, Yonghong and Auman, J.Todd and Chen, Qing-Rong and Chen, Peng-Chieh and Chen, Ken and Hadjipanayis, Angela and Lee, Eunjung and Lee, Semin and ... and TCGA Res Network
Cell, ISSN 0092-8674, 10/2013, Volume 155, Issue 2, pp. 462 - 477
We describe the landscape of somatic genomic alterations based on multidimensional and comprehensive characterization of more than 500 glioblastoma tumors... 
PATHWAYS | SURVIVAL | GRADE GLIOMA | MELANOMA | BIOCHEMISTRY & MOLECULAR BIOLOGY | HUMAN CANCERS | COPY-NUMBER ALTERATION | TUMORS | EXPRESSION | DRIVER MUTATIONS | EGFR | CELL BIOLOGY | Platelet-derived growth factor | RNA | Gene mutations | Analysis | Methylation | Glioblastoma multiforme | Telomerase
Journal Article
Journal Article
Journal Article
Journal of Chemical Information and Modeling, ISSN 1549-9596, 11/2013, Volume 53, Issue 11, p. 2781
  Halogen bonding interactions between halogenated ligands and proteins were examined using the crystal structures deposited to date in the PDB. The data was... 
Proteins | Ligands | Amino acids | Chemical elements
Journal Article
Cancer Research, ISSN 0008-5472, 08/2015, Volume 75, Issue 15 Supplement, pp. 3762 - 3762
Journal Article
Genes and Development, ISSN 0890-9369, 07/2013, Volume 27, Issue 13, pp. 1462 - 1472
Journal Article
Cell, ISSN 0092-8674, 04/2014, Volume 157, Issue 3, pp. 753 - 753
We describe the landscape of somatic genomic alterations based on multidimensional and comprehensive characterization of more than 500 glioblastoma tumors... 
BIOCHEMISTRY & MOLECULAR BIOLOGY | CELL BIOLOGY | Glioblastoma - genetics | Signal Transduction | Humans | Brain Neoplasms - genetics | Female | Glioblastoma - metabolism | Male | Gene Expression Profiling | Mutation | Proteome - analysis | Gene Regulatory Networks | Brain Neoplasms - metabolism
Journal Article
Proceedings of the ACM Conference on bioinformatics, computational biology and biomedicine, 10/2012, pp. 545 - 547
The tremendous demand on computer memory and computing time for prediction of complex secondary structures limits the applicability of most RNA secondary... 
sequence segmentation | PKnotsRG | excursion | inversion | accuracy retention | Accuracy retention | Excursion | Inversion | Sequence segmentation
Conference Proceeding
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