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The Plant Cell, ISSN 1040-4651, 10/2014, Volume 26, Issue 10, pp. 3911 - 3921
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 7/2008, Volume 36, Issue suppl_2, pp. W10 - W13
The R-Coffee web server produces highly accurate multiple alignments of noncoding RNA (ncRNA) sequences, taking into account predicted secondary structures.... 
PROGRAMS | SEARCH | BENCHMARK | BIOCHEMISTRY & MOLECULAR BIOLOGY | SECONDARY STRUCTURE PREDICTION | T-COFFEE | MULTIPLE | STRUCTURAL ALIGNMENT | Sequence Alignment - methods | Algorithms | Sequence Analysis, RNA | RNA, Untranslated - chemistry | Software | Internet | Nucleic Acid Conformation
Journal Article
Immunity, ISSN 1074-7613, 06/2014, Volume 40, Issue 6, pp. 961 - 973
Journal Article
Methods in Molecular Biology, ISSN 1064-3745, 2016, Volume 1374, pp. 23 - 54
The Universal Protein Resource (UniProt, http://www.uniprot.org ) consortium is an initiative of the SIB Swiss Institute of Bioinformatics (SIB), the European... 
Amino-acid sequence | UniProt | Swiss-Prot | Protein database | Manual annotation | TrEMBL | Computational Biology - methods | Animals | Databases, Protein | Humans | Web Browser
Journal Article
Bioinformatics, ISSN 1367-4803, 9/2008, Volume 24, Issue 17, pp. 1917 - 1925
Motivation: In silico modeling of gene regulatory networks has gained some momentum recently due to increased interest in analyzing the dynamics of biological... 
CELLS | NETS | DIFFERENTIATION | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMICAL RESEARCH METHODS | MATHEMATICAL & COMPUTATIONAL BIOLOGY | Proteome - genetics | Algorithms | Gene Expression Regulation - genetics | Computer Simulation | Logistic Models | Models, Genetic | Signal Transduction - genetics | Software | Original Papers
Journal Article
The Plant Journal, ISSN 0960-7412, 09/2012, Volume 71, Issue 5, pp. 699 - 711
Journal Article
Nature Genetics, ISSN 1061-4036, 2012, Volume 44, Issue 2, pp. 133 - 139
We performed exome sequencing to detect somatic mutations in protein-coding regions in seven melanoma cell lines and donor-matched germline cells. All melanoma... 
HUMAN BREAST | METASTASIS | BYPASS | GENE | GENETICS & HEREDITY | GERMLINE MUTATIONS | BRAF | MECHANISMS | MALIGNANT-MELANOMA | MAPK PATHWAY | GENOME | Gene mutations | Melanoma | Exome sequencing | Reports | Genetic aspects | Research | Mitogen-activated protein kinases | Proteins | Medical research | Mutation | Kinases
Journal Article
Nucleic Acids Research, ISSN 0305-1048, 01/2013, Volume 41, Issue 1, pp. D344 - D347
PROSITE (http://prosite.expasy.org/) consists of documentation entries describing protein domains, families and functional sites, as well as associated... 
DATABASE | PRORULE | BIOCHEMISTRY & MOLECULAR BIOLOGY | Protein Structure, Tertiary | Amino Acid Sequence | Sequence Analysis, Protein | Databases, Protein | Molecular Sequence Annotation | Conserved Sequence | Proteins - classification | Internet | Proteins - chemistry | Proteome - chemistry | Amino Acid Motifs
Journal Article
eLife, ISSN 2050-084X, 05/2015, Volume 4, Issue MAY, pp. 1 - 20
Morphogenesis emerges from complex multiscale interactions between genetic and mechanical processes. To understand these processes, the evolution of cell... 
LEAF SHAPE | ARABIDOPSIS-THALIANA | MODELING FRAMEWORK | COMPUTATIONAL MORPHODYNAMICS | BIOLOGY | SHOOT APICAL MERISTEM | PLANT DEVELOPMENT | SURFACE GROWTH | CELL-GROWTH | VEGETATIVE SHOOT | QUANTITATIVE-ANALYSIS | Image Processing, Computer-Assisted - statistics & numerical data | Cell Proliferation | Arabidopsis - growth & development | Cassia - genetics | Imaging, Three-Dimensional - methods | Flowers - ultrastructure | Drosophila melanogaster - genetics | Plant Development - genetics | Lycopersicon esculentum - growth & development | Time-Lapse Imaging - instrumentation | Cell Shape | Imaging, Three-Dimensional - instrumentation | Microtubules - ultrastructure | Lycopersicon esculentum - genetics | Time-Lapse Imaging - methods | Fruit - ultrastructure | Fruit - genetics | Gene Expression | Morphogenesis - genetics | Arabidopsis - ultrastructure | Cassia - growth & development | Drosophila melanogaster - ultrastructure | Image Processing, Computer-Assisted - methods | Lycopersicon esculentum - ultrastructure | Flowers - growth & development | Arabidopsis - genetics | Fruit - growth & development | Microscopy, Confocal | Algorithms | Animals | Time-Lapse Imaging - statistics & numerical data | Anisotropy | Cassia - ultrastructure | Imaging, Three-Dimensional - statistics & numerical data | Microtubules - genetics | Drosophila melanogaster - growth & development | Software | Flowers - genetics | Library collections | Segmentation | Image processing | Cell division | Gene expression | Open source software | Computer programs | Morphogenesis | Proteins | Ostomy | Cell size | Plant sciences | Methods
Journal Article