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1. Full Text Environmental DNA as a 'snapshot' of fish distribution: A case study of Japanese jack mackerel in Maizuru Bay, Sea of Japan
by Yamamoto, Satoshi and Minami, Kenji and Fukaya, Keiichi and Takahashi, Kohji and Sawada, Hideki and Murakami, Hiroaki and Tsuji, Satsuki and Hashizume, Hiroki and Kubonaga, Shou and Horiuchi, Tomoya and Hongo, Masamichi and Nishida, Jo and Okugawa, Yuta and Fujiwara, Ayaka and Fukuda, Miho and Hidaka, Shunsuke and Suzuki, Keita W and Miya, Masaki and Araki, Hitoshi and Yamanaka, Hiroki and Maruyama, Atsushi and Miyashita, Kazushi and Masuda, Reiji and Minamoto, Toshifumi and Kondoh, Michio
PLoS ONE, ISSN 1932-6203, 03/2016, Volume 11, Issue 3, p. e0149786
Recent studies in streams and ponds have demonstrated that the distribution and biomass of aquatic organisms can be estimated by detection and quantification... 
BIODIVERSITY | DENSITY | EDNA | PREDATOR AVOIDANCE | MULTIDISCIPLINARY SCIENCES | ASSEMBLAGES | IMPACTS | DNA - genetics | Animals | Bays | Ecosystem | Japan | Biomass | Perciformes - genetics | Economic aspects | Physiological aspects | Research | DNA | Spatial discrimination | Science | Mackerel | Acoustics | Water flow | Fishing | Echosounders | Case studies | Endangered & extinct species | Water analysis | Censuses | Fish | Streams | Deoxyribonucleic acid--DNA | Biodegradation | Data points | Population growth | Fisheries | Environmental factors | Water sampling | Surveillance | Surface water | Open systems | Aquatic organisms | Environmental monitoring | Methods | Aquatic ecosystems | Deoxyribonucleic acid
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2. Full Text Cover Feature: Synthesis of a Bis‐Urea Dimer and Its Effects on the Physical Properties of an Amphiphilic Tris‐Urea Supramolecular Hydrogel (Chem. Asian J. 8/2018)
by Sawada, Hiroki and Yamanaka, Masamichi
Chemistry – An Asian Journal, ISSN 1861-4728, 04/2018, Volume 13, Issue 8, pp. 883 - 883
Supramolecular hydrogels were formed from mixtures of tris‐urea and a bis‐urea dimer in appropriate ratios, with the bis‐urea dimer acting as a covalent... 
self-assembly | cross-linking | ureas | gels | supramolecular chemistry
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3. Full Text Estimation of fish biomass using environmental DNA
by Takahara, Teruhiko and Minamoto, Toshifumi and Yamanaka, Hiroki and Doi, Hideyuki and Kawabata, Zen'ichiro
PLoS ONE, ISSN 1932-6203, 04/2012, Volume 7, Issue 4, p. e35868
Environmental DNA (eDNA) from aquatic vertebrates has recently been used to estimate the presence of a species. We hypothesized that fish release DNA into the... 
PONDS | CARP CYPRINUS-CARPIO | TEMPERATURE | BENTHIVOROUS FISH | MULTIDISCIPLINARY SCIENCES | COMMUNITIES | COMMON CARP | LAKE | STRESS | WATER | Protection and preservation | Ponds | Ecosystems | Fishes | DNA | Cytochrome | Strategic management | Carp | Shellfish | Laboratories | Aquaria | Environmental changes | Biomass | Metabolism | Gene expression | Water temperature | Experiments | Vertebrates | Aquariums | Field tests | Population | Fish | Predation | Species | River ecology | Deoxyribonucleic acid--DNA | Information theory | Deoxyribonucleic acid
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4. Application of environmental DNA analysis for the assessment of the habitat connectivity between marine and river ecosystems
by Yamanaka, Hiroki
Kaiyo to Seibutsu, ISSN 0285-4376, 01/2018, Volume 40, Issue 1, pp. 54 - 59
Environmental DNA (eDNA) analysis can be used for determining the fish migration between the river and the sea. Migrating fishes require both habitats for... 
Environments | Environmental assessment | Fishways | Ecosystems | Man-induced effects | DNA | Migrations | Habitat
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5. Full Text Upregulated glial cell line‐derived neurotrophic factor through cyclooxygenase‐2 activation in the muscle is required for mechanical hyperalgesia after exercise in rats
by Murase, Shiori and Terazawa, Etsuji and Hirate, Kenji and Yamanaka, Hiroki and Kanda, Hirosato and Noguchi, Koichi and Ota, Hiroki and Queme, Fernando and Taguchi, Toru and Mizumura, Kazue
The Journal of Physiology, ISSN 0022-3751, 06/2013, Volume 591, Issue 12, pp. 3035 - 3048
•  Unaccustomed strenuous exercise that includes lengthening contraction often causes delayed onset muscle soreness (DOMS), characterised as muscular... 
NEUROPATHIC PAIN | SKELETAL-MUSCLE | PHYSIOLOGY | GDNF | PROSTAGLANDINS | NOCICEPTORS | INFLAMMATION | FACTOR FAMILY-MEMBERS | SORENESS | NEUROSCIENCES | SENSORY NEURONS | BRADYKININ | Up-Regulation | Nerve Growth Factor - metabolism | Cyclooxygenase 2 Inhibitors - pharmacology | Hyperalgesia - metabolism | Myalgia - drug therapy | Glial Cell Line-Derived Neurotrophic Factor - genetics | Rats | Male | Nerve Growth Factor - genetics | Muscle Fibers, Skeletal - metabolism | RNA, Messenger - metabolism | Rats, Sprague-Dawley | Glial Cell Line-Derived Neurotrophic Factor - metabolism | Animals | Muscle Contraction | Hyperalgesia - drug therapy | Cyclooxygenase 2 - genetics | Cyclooxygenase 2 - metabolism | Cyclooxygenase 2 Inhibitors - therapeutic use | Myalgia - metabolism | Muscle Fibers, Skeletal - physiology | Physical Exertion | COX-2 inhibitors | Growth factors | Rodents | Skeletal Muscle and Exercise
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6. Full Text PyBidine–Cu(OTf)2‐Catalyzed Asymmetric [3+2] Cycloaddition with Imino Esters: Harmony of Cu–Lewis Acid and Imidazolidine‐NH Hydrogen Bonding in Concerto Catalysis
by Arai, Takayoshi and Ogawa, Hiroki and Awata, Atsuko and Sato, Makoto and Watabe, Megumi and Yamanaka, Masahiro
Angewandte Chemie International Edition, ISSN 1433-7851, 01/2015, Volume 54, Issue 5, pp. 1595 - 1599
A bis(imidazolidine)pyridine (PyBidine)–Cu(OTf) 2 complex catalyzing the endo‐selective [3+2] cycloaddition of nitroalkenes with imino esters was applied to... 
indoles | asymmetric synthesis | cycloaddition | asymmetric catalysis | heterocycles | Heterocycles | Cycloaddition | Indoles | Asymmetric synthesis | Asymmetric catalysis | Pyridines - chemistry | Molecular Conformation | Crystallography, X-Ray | Esters | Mesylates - chemistry | Coordination Complexes - chemistry | Cycloaddition Reaction | Lewis Acids - chemistry | Alkenes - chemistry | Hydrogen Bonding | Imines - chemistry | Imidazolidines - chemistry | Catalysis | Chemical bonds
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7. Full Text Use of droplet digital PCR for estimation of fish abundance and biomass in environmental DNA surveys
by Doi, Hideyuki and Uchii, Kimiko and Takahara, Teruhiko and Matsuhashi, Saeko and Yamanaka, Hiroki and Minamoto, Toshifumi
PLoS ONE, ISSN 1932-6203, 03/2015, Volume 10, Issue 3, p. e0122763
An environmental DNA (eDNA) analysis method has been recently developed to estimate the distribution of aquatic animals by quantifying the number of target DNA... 
REAL-TIME PCR | BIODIVERSITY | EDNA | QUANTIFICATION | MULTIDISCIPLINARY SCIENCES | COPY NUMBER | QUANTITATION | WATER SAMPLES | Carps - growth & development | Animals | DNA - analysis | Environmental Monitoring - methods | Polymerase Chain Reaction | Biomass | Carps - genetics | Real-Time Polymerase Chain Reaction | Fishes | DNA | Carp | Ecosystems | Abundance | Experiments | Water temperature | Biological diversity | Polymerase chain reaction | Accuracy | Researchers | Body mass | Water quality | Fish | Species | Deoxyribonucleic acid--DNA | Methods | Aquatic animals | Deoxyribonucleic acid
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8. Full Text The release rate of environmental DNA from juvenile and adult fish
by Maruyama, Atsushi and Nakamura, Keisuke and Yamanaka, Hiroki and Kondoh, Michio and Minamoto, Toshifumi
PLoS ONE, ISSN 1932-6203, 12/2014, Volume 9, Issue 12, p. e114639
The environmental DNA (eDNA) technique is expected to become a powerful, non-invasive tool for estimating the distribution and biomass of organisms. This... 
WATER SAMPLES | EDNA | MULTIDISCIPLINARY SCIENCES | Fish Proteins - genetics | Perciformes - growth & development | Animals | Cytochromes b - genetics | DNA - analysis | Ecosystem | Metagenomics - methods | Real-Time Polymerase Chain Reaction - methods | Half-Life | DNA - metabolism | Perciformes - genetics | Fishes | Body weight | DNA | Biodegradation | Containers | Radioactive half-life | Ontogeny | Biomass | Floating structures | Degradation | Vertebrates | Mathematical analysis | Introduced fishes | Fish | Curve fitting | Age composition | Deoxyribonucleic acid--DNA | Deoxyribonucleic acid
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9. Full Text TRPA1 induced in sensory neurons contributes to cold hyperalgesia after inflammation and nerve injury
by Obata, Koichi and Katsura, Hirokazu and Mizushima, Toshiyuki and Yamanaka, Hiroki and Kobayashi, Kimiko and Dai, Yi and Fukuoka, Tetsuo and Tokunaga, Atsushi and Tominaga, Makoto and Noguchi, Koichi
Journal of Clinical Investigation, ISSN 0021-9738, 09/2005, Volume 115, Issue 9, pp. 2393 - 2401
Cold hyperalgesia is a well-documented symptom of inflammatory and neuropathic pain; however, the underlying mechanisms of this enhanced sensitivity to cold... 
MEDICINE, RESEARCH & EXPERIMENTAL | Neurons, Afferent - cytology | Cold Temperature | MAP Kinase Signaling System - physiology | Nerve Growth Factor - metabolism | Calcium Channels - metabolism | TRPC Cation Channels | Rats | Male | Ganglia, Spinal - cytology | Inflammation | Rats, Sprague-Dawley | Hyperalgesia | Glial Cell Line-Derived Neurotrophic Factor - metabolism | Animals | In Situ Hybridization | TRPA1 Cation Channel | p38 Mitogen-Activated Protein Kinases - antagonists & inhibitors | Neurons, Afferent - pathology | TRPM Cation Channels - genetics | Ankyrins | TRPM Cation Channels - metabolism | Neurons, Afferent - metabolism | Pain Measurement | Calcium Channels - genetics
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10. Full Text Proposal for diagnostic criteria for IgG4-related kidney disease
by Kawano, Mitsuhiro and Saeki, Takako and Nakashima, Hitoshi and Nishi, Shinichi and Yamaguchi, Yutaka and Hisano, Satoshi and Yamanaka, Nobuaki and Inoue, Dai and Yamamoto, Motohisa and Takahashi, Hiroki and Nomura, Hideki and Taguchi, Takashi and Umehara, Hisanori and Makino, Hirofumi and Saito, Takao
Clinical and Experimental Nephrology, ISSN 1342-1751, 10/2011, Volume 15, Issue 5, pp. 615 - 626
IgG4-related disease has attracted wide attention recently. It is characterized by a high level of serum IgG4 and dense infiltration of IgG4-positive plasma... 
Nephrology | Medicine & Public Health | Diagnostic criteria | Tubulointerstitial nephritis | IgG4 | Urology | IgG4-related kidney disease | INFLAMMATORY PSEUDOTUMOR | AUTOIMMUNE PANCREATITIS | EXTRAPANCREATIC LESIONS | CONSENSUS | UROLOGY & NEPHROLOGY | SERUM | IGG4 CONCENTRATIONS | NEPHROPATHY | Immunohistochemistry | Immunoglobulin G - blood | Kidney - pathology | Kidney Diseases - pathology | Nephritis, Interstitial - diagnosis | Humans | Kidney Diseases - diagnosis | Middle Aged | Pancreas - pathology | Male | Tomography, X-Ray Computed | Autoimmune Diseases - diagnosis | Algorithms | Nephritis, Interstitial - pathology | Aged, 80 and over | Adult | Female | Pancreatitis - pathology | Aged | Autoimmune Diseases - pathology | Urine | Medical colleges | CT imaging | Lymphocytes | Analysis | Immunoglobulin G | Pancreatitis | Immunoglobulin E | Kidney diseases | Universities and colleges | Diagnosis
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11. Full Text Genome sequencing of the staple food crop white Guinea yam enables the development of a molecular marker for sex determination
by Tamiru, Muluneh and Natsume, Satoshi and Takagi, Hiroki and White, Benjamen and Yaegashi, Hiroki and Shimizu, Motoki and Yoshida, Kentaro and Uemura, Aiko and Oikawa, Kaori and Abe, Akira and Urasaki, Naoya and Matsumura, Hideo and Babil, Pachakkil and Yamanaka, Shinsuke and Matsumoto, Ryo and Muranaka, Satoru and Girma, Gezahegn and Lopez-Montes, Antonio and Gedil, Melaku and Bhattacharjee, Ranjana and Abberton, Michael and Kumar, P.Lava and Rabbi, Ismail and Tsujimura, Mai and Terachi, Toru and Haerty, Wilfried and Corpas, Manuel and Kamoun, Sophien and Kahl, Günter and Takagi, Hiroko and Asiedu, Robert and Terauchi, Ryohei
BMC Biology, ISSN 1741-7007, 09/2017, Volume 15, Issue 1, pp. 86 - 20
Background: Root and tuber crops are a major food source in tropical Africa. Among these crops are several species in the monocotyledonous genus Dioscorea... 
Dioscorea | Dioecy | Yam | Sex determination | Whole-genome sequence | RNA | PHYLOGENETIC ANALYSIS | GENE | ALIGNMENT | ANNOTATION | BIOLOGY | TUBER LECTIN 1 | FRAMEWORK | RICE | TOOL | Biomarkers - metabolism | Dioscorea - genetics | Plant Breeding | Crops, Agricultural - genetics | Genome, Plant | Quantitative Trait Loci | Whole Genome Sequencing | Genetic aspects | Research | Nucleotide sequencing | Genes | Yams | DNA sequencing | Ontology | Genomics | Sex | Genomes | Phylogeny | Sex linkage | Gene sequencing | Consortia | Sustainable agriculture | Sustainability | Cell cycle | Phylogenetics | Genetics | Bioinformatics | Genomic analysis | Food sources | Cultivation | Research & development--R&D | Breeding | Crops | Crop improvement | Artificial chromosomes | Seedlings | Quantitative trait loci | Progeny | Plant breeding | Food security | Software
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12. Full Text Correction: The Release Rate of Environmental DNA from Juvenile and Adult Fish
by Maruyama, Atsushi and Nakamura, Keisuke and Yamanaka, Hiroki and Kondoh, Michio and Minamoto, Toshifumi
PloS one, ISSN 1932-6203, 2019, Volume 14, Issue 2, p. e0212145
[This corrects the article DOI: 10.1371/journal.pone.0114639.]. 
Deoxyribonucleic acid--DNA | Deoxyribonucleic acid | DNA
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13. Full Text Synthesis of a Bis‐Urea Dimer and Its Effects on the Physical Properties of an Amphiphilic Tris‐Urea Supramolecular Hydrogel
by Sawada, Hiroki and Yamanaka, Masamichi
Chemistry – An Asian Journal, ISSN 1861-4728, 04/2018, Volume 13, Issue 8, pp. 929 - 933
The successful development of stiff supramolecular gels is an important goal toward their practical application. One approach to stiffen supramolecular gels is... 
self-assembly | cross-linking | ureas | gels | supramolecular chemistry | GEL FORMATION | MOLECULAR-WEIGHT GELATORS | DESIGN | NANOFIBERS | NETWORK STRUCTURE | GELATION | CHEMISTRY, MULTIDISCIPLINARY | ORGANOGELS | MECHANICAL REINFORCEMENT | NANOCOMPOSITE HYDROGELS | MODULATION | Urea | Analysis
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14. Full Text Environmental DNA analysis for estimating the abundance and biomass of stream fish
by Doi, Hideyuki and Inui, Ryutei and Akamatsu, Yoshihisa and Kanno, Kazuki and Yamanaka, Hiroki and Takahara, Teruhiko and Minamoto, Toshifumi
Freshwater Biology, ISSN 0046-5070, 01/2017, Volume 62, Issue 1, pp. 30 - 39
Environmental DNA ( eDNA ) analysis for detecting the presence of aquatic and terrestrial organisms is an established method, and the eDNA concentration of a... 
Plecoglossus altivelis | species distribution | eDNA | quantitative PCR | river ecosystem | snorkelling survey | REAL-TIME PCR | MARINE & FRESHWATER BIOLOGY | JAPAN | WATER SAMPLES | TOOL | Genetic research | Rivers | Animal behavior | Ecosystems | Analysis | DNA
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