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1. Full Text Genomic analysis of marker-associated fiber development genes in upland cotton (Gossypium hirsutum L)
by Yu, John Z and Gervers, Kyle A
Euphytica, ISSN 0014-2336, 4/2019, Volume 215, Issue 4, pp. 1 - 10
Understanding genetic control of fiber development is essential for cotton improvement. This study analyzed several thousand fiber Unigenes in Upland cotton... 
Life Sciences | Plant Pathology | Biotechnology | Tetraploid genome | Plant Genetics and Genomics | EST unigenes | Pleiotropic function | Plant Physiology | Fiber development | Plant Sciences | Upland cotton ( Gossypium hirsutum ) | Upland cotton (Gossypium hirsutum) | AGRONOMY | PLANT SCIENCES | HORTICULTURE | EVOLUTION | SEQUENCE | KEGG | DIVERSITY | MAP | Legumes | Beans | Analysis | Genes | Genomics | Genetic research | Fatty acids | Mimosaceae | Recombination | Genomic analysis | Nucleotide sequence | Genetic control | Cell walls | Breeding | Encyclopedias | Septum | Genomes | Biosynthesis | Wall deposition | Cotton | Proteins | Mitochondria | Plant breeding | Annotations | Histidine | Developmental stages | Birefringence | Elongation | Legumin
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2. Full Text QTL mapping for flowering-time and photoperiod insensitivity of cotton Gossypium darwinii Watt
by Kushanov, Fakhriddin N and Buriev, Zabardast T and Shermatov, Shukhrat E and Turaev, Ozod S and Norov, Tokhir M and Pepper, Alan E and Saha, Sukumar and Ulloa, Mauricio and Yu, John Z and Jenkins, Johnie N and Abdukarimov, Abdusattor and Abdurakhmonov, Ibrokhim Y
PLoS ONE, ISSN 1932-6203, 10/2017, Volume 12, Issue 10, p. e0186240
Most wild and semi-wild species of the genus Gossypium are exhibit photoperiod-sensitive flowering. The wild germplasm cotton is a valuable source of genes for... 
1ST FRUITING BRANCH | HIRSUTUM L. GERMPLASM | UPLAND COTTON | LINKAGE DISEQUILIBRIUM | FIBER QUALITY TRAITS | BARBADENSE L | MULTIDISCIPLINARY SCIENCES | PROTEIN-KINASE CK2 | QUANTITATIVE TRAIT LOCUS | MOLECULAR DIVERSITY | GENETIC-MAP | Genetic Association Studies | Breeding | Humans | Uzbekistan | Genotype | Photoperiod | Genome, Plant | Flowers - growth & development | Microsatellite Repeats - genetics | Textiles | Reproduction | Gossypium - genetics | Flowers - genetics | Gossypium - growth & development | Quantitative Trait Loci - genetics | Research | Nucleotide sequencing | DNA sequencing | Genes | Genomics | Genomes | Cotton | Kinases | Gene sequencing | Germplasm | Annotations | Maps | Flowering | Agriculture | Deoxyribonucleic acid--DNA | Cultivars | Marker-assisted selection | Sensitivity analysis | Nucleotide sequence | Markers | Gene expression | Quantitative trait loci | Progeny | Plant breeding | Molecular modelling | Mutagenesis | Genotyping | Irradiation | Genetic crosses | Gene mapping | Deoxyribonucleic acid | DNA
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3. Full Text Unveiling the Interfacial Effects for Enhanced Hydrogen Evolution Reaction on MoS2/WTe2 Hybrid Structures
by Zhou, Yu and Pondick, Joshua V and Silva, Jose Luis and Woods, John M and Hynek, David J and Matthews, Grace and Shen, Xin and Feng, Qingliang and Liu, Wen and Lu, Zhixing and Liang, Zhixiu and Brena, Barbara and Cai, Zhao and Wu, Min and Jiao, Liying and Hu, Shu and Wang, Hailiang and Araujo, Carlos Moyses and Cha, Judy J and Brookhaven National Lab. (BNL), Upton, NY (United States) and Institutionen för fysik och astronomi and Teknisk-naturvetenskapliga vetenskapsområdet and Uppsala universitet and Fysiska sektionen and Materialteori
Small, ISSN 1613-6810, 05/2019, Volume 15, Issue 19, p. n/a
Using the MoS2‐WTe2 heterostructure as a model system combined with electrochemical microreactors and density function theory calculations, it is shown that... 
interfacial effects | electrochemical microreactors | heterostructures | hydrogen evolution reaction | MoS2/WTe2 hybrid | MAGNETORESISTANCE | PHYSICS, CONDENSED MATTER | MONOLAYER MOS2 | PHYSICS, APPLIED | MoS2 | MOLYBDENUM | WORK FUNCTION | MATERIALS SCIENCE, MULTIDISCIPLINARY | GRAPHENE | CHEMISTRY, PHYSICAL | NANOSCIENCE & NANOTECHNOLOGY | CHEMISTRY, MULTIDISCIPLINARY | SULFUR VACANCIES | DENSITY | WTe2 hybrid | ACTIVE EDGE SITES | MOS2 NANOSHEETS | CATALYTIC-ACTIVITY | Catalysts | Hydrogen evolution | Slope stability | Substrates | Screening | Molybdenum disulfide | Interface stability | Transition metal compounds | Charge injection | Microreactors | Monolayers | Heterojunctions | Density functional theory | Catalysis | Heterostructures | Hybrid structures | INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY | Materials Chemistry | Materialkemi | Fysikalisk kemi | Chemical Sciences | Naturvetenskap | Physical Chemistry | Kemi | Natural Sciences
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4. Full Text The draft genome of a diploid cotton Gossypium raimondii
by Wang, Kunbo and Wang, Zhiwen and Li, Fuguang and Ye, Wuwei and Wang, Junyi and Song, Guoli and Yue, Zhen and Cong, Lin and Shang, Haihong and Zhu, Shilin and Zou, Changsong and Li, Qin and Yuan, Youlu and Lu, Cairui and Wei, Hengling and Gou, Caiyun and Zheng, Zequn and Yin, Ye and Zhang, Xueyan and Liu, Kun and Wang, Bo and Song, Chi and Shi, Nan and Kohel, Russell J and Percy, Richard G and Yu, John Z and Zhu, Yu-Xian and Cang, Jun and Yu, Shuxun
Nature Genetics, ISSN 1061-4036, 10/2012, Volume 44, Issue 10, pp. 1098 - 1103
We have sequenced and assembled a draft genome of G. raimondii, whose progenitor is the putative contributor of the D subgenome to the economically important... 
FIBER | ORGANIZATION | TRICHOME DEVELOPMENT | CELL ELONGATION | BIOSYNTHESIS | SEQUENCE | GENES | GENETICS & HEREDITY | (+)-DELTA-CADINENE SYNTHASE | MAP | EXPRESSION | Genes, Plant | Molecular Sequence Annotation | Synteny | Transcriptome | Gossypium - enzymology | Genome, Plant | Phylogeny | Chromosomes, Plant | Sequence Analysis, DNA | DNA Transposable Elements | Diploidy | Biosynthetic Pathways - genetics | Base Sequence | Gossypium - genetics | High-Throughput Nucleotide Sequencing | Terminal Repeat Sequences | Microsatellite Repeats | Evolution, Molecular | Genomes | Research | Genomics | Genes | Genetics | Genetic testing | Cotton | Comparative analysis | Chromosomes | Data bases | Manuscripts
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5. Full Text Genome sequence of the cultivated cotton gossypium arboreum
by Li, Fuguang and Fan, Guangyi and Wang, Kunbo and Sun, Fengming and Yuan, Youlu and Song, Guoli and Li, Qin and Ma, Zhiying and Lu, Cairui and Zou, Changsong and Chen, Wenbin and Liang, Xinming and Shang, Haihong and Liu, Weiqing and Shi, Chengcheng and Xiao, Guanghui and Gou, Caiyun and Ye, Wuwei and Xu, Xun and Zhang, Xueyan and Wei, Hengling and Li, Zhifang and Zhang, Guiyin and Wang, Junyi and Liu, Kun and Kohel, Russell J and Percy, Richard G and Yu, John Z and Zhu, Yu-Xian and Wang, Jan and Yu, Shuxun
Nature Genetics, ISSN 1061-4036, 2014, Volume 46, Issue 6, pp. 567 - 572
The complex allotetraploid nature of the cotton genome (AADD; 2n = 52) makes genetic, genomic and functional analyses extremely challenging. Here we sequenced... 
FIBER | CELL ELONGATION | EVOLUTION | ETHYLENE | DRAFT GENOME | BIOSYNTHESIS | SORGHUM | GENUS | GENETICS & HEREDITY | DYNAMICS | ARABIDOPSIS | Polyploidy | Gene Library | Species Specificity | Retroelements | Transcriptome | Genome, Plant | Phylogeny | Plant Diseases - prevention & control | Sequence Analysis, DNA | DNA, Plant | Chromosome Mapping - methods | Gossypium - genetics | Verticillium | Plant Diseases - genetics | Models, Genetic | Ethylenes - chemistry | Terminal Repeat Sequences | Binding Sites | Disease Resistance - genetics | Evolution, Molecular | Research | Nucleotide sequencing | DNA sequencing | Studies | Seeds | Genomics | Cloning | Genetic engineering | Genomes | Cotton | Gene expression | Deoxyribonucleic acid--DNA
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6. Full Text Performance Comparison of Two Hybrid Si/SiC Device Concepts
by Li, Zongjian and Wang, Jun and He, Zhizhi and Yu, Jiajun and Dai, Yuxing and Shen, Z. John
IEEE Journal of Emerging and Selected Topics in Power Electronics, ISSN 2168-6777, 10/2019, pp. 1 - 1
Various Si/SiC hybrid device concepts aim at achieving SiC performance at a significantly reduced cost in comparison to full SiC solutions. Both the... 
Insulated gate bipolar transistors | Inverter | MOSFET | Schottky diodes | SiC Schottky diode | IGBT | Silicon carbide | Switches | Hybrid Switch | Silicon | Hybrid power systems | SiC MOSFET
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7. Full Text Fine mapping and candidate gene analysis of the dominant glandless gene Gl 2 ^sup e^ in cotton (Gossypium spp.)
by Hailiang Cheng and Cairui Lu and John Z Yu and Changsong Zou and Youping Zhang and Qiaolian Wang and Juan Huang and Xiaoxu Feng and Pengfei Jiang and Wencui Yang and Guoli Song
Theoretical and Applied Genetics, ISSN 0040-5752, 07/2016, Volume 129, Issue 7, p. 1347
Key message Dominant glandless gene Gl 2 e was fine-mapped to a 15 kb region containing one candidate gene encoding an MYC transcription factor, sequence and... 
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8. Full Text Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution
by Li, Fuguang and Fan, Guangyi and Lu, Cairui and Xiao, Guanghui and Zou, Changsong and Kohel, Russell J and Ma, Zhiying and Shang, Haihong and Ma, Xiongfeng and Wu, Jianyong and Liang, Xinming and Huang, Gai and Percy, Richard G and Liu, Kun and Yang, Weihua and Chen, Wenbin and Du, Xiongming and Shi, Chengcheng and Yuan, Youlu and Ye, Wuwei and Liu, Xin and Zhang, Xueyan and Liu, Weiqing and Wei, Hengling and Wei, Shoujun and Huang, Guodong and Zhang, Xianlong and Zhu, Shuijin and Zhang, He and Sun, Fengming and Wang, Xingfen and Liang, Jie and Wang, Jiahao and He, Qiang and Huang, Leihuan and Wang, Jun and Cui, Jinjie and Song, Guoli and Wang, Kunbo and Xu, Xun and Yu, John Z and Zhu, Yuxian and Yu, Shuxun
Nature Biotechnology, ISSN 1087-0156, 05/2015, Volume 33, Issue 5, pp. 524 - 530
Gossypium hirsutum has proven difficult to sequence owing to its complex allotetraploid (A(t)D(t)) genome. Here we produce a draft genome using 181-fold... 
FIBER | ETHYLENE | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | TRANSPOSABLE ELEMENTS | FINDER | SUGGESTS | MAP | PROGRAM | PREDICTION | Amino Acid Oxidoreductases - genetics | Cotton Fiber | Polyploidy | Base Sequence | Gossypium - genetics | DNA Transposable Elements - genetics | Chromosome Mapping | Genome, Plant | Phylogeny | Sequence Analysis, DNA | Evolution, Molecular | Glucosyltransferases - genetics | Genetic research | Evolutionary genetics | Research | Cotton | Genomes
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9. Full Text Toward Sequencing Cotton (Gossypium) Genomes
by Z. Jeffrey Chen and Brian E. Scheffler and Elizabeth Dennis and Barbara A. Triplett and Tianzhen Zhang and Wangzhen Guo and Xiaoya Chen and David M. Stelly and Pablo D. Rabinowicz and Christopher D. Town and Tony Arioli and Curt Brubaker and Roy G. Cantrell and Jean-Marc Lacape and Mauricio Ulloa and Peng Chee and Alan R. Gingle and Candace H. Haigler and Richard Percy and Sukumar Saha and Thea Wilkins and Robert J. Wright and Allen Van Deynze and Yuxian Zhu and Shuxun Yu and Ibrokhim Abdurakhmonov and Ishwarappa Katageri and P. Ananda Kumar and Mehboob-ur-Rahman and Yusuf Zafar and John Z. Yu and Russell J. Kohel and Jonathan F. Wendel and Andrew H. Paterson
Plant Physiology, ISSN 0032-0889, 12/2007, Volume 145, Issue 4, pp. 1303 - 1310
Tetraploidy | Genetic mapping | Polyploidy | Diploidy | Genomics | Letter to the Editor | Genomes | Plants | Cotton | Sequencing | Chromosomes | HIRSUTUM L | FIBER QUALITY | CHROMOSOME | CELL ELONGATION | EVOLUTION | POLYPLOID FORMATION | IN-SITU HYBRIDIZATION | GENE-EXPRESSION | MICROSATELLITE MARKERS | ALLOTETRAPLOID COTTON | PLANT SCIENCES | Sequence Analysis, DNA | Gossypium - genetics | Genome, Plant | Evaluation | Usage | Chromosome mapping | DNA sequencers | Innovations | Physiological aspects | Research | Chemical properties
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10. Genetic Diversity of the Two Commercial Tetraploid Cotton Species in the Gossypium Diversity Reference Set
by Lori L Hinze and Elodie Gazave and Michael A Gore and David D Fang and Brian E Scheffler and John Z Yu and Don C Jones and James Frelichowski and Richard G Percy
The Journal of Heredity, ISSN 0022-1503, 05/2016, Volume 107, Issue 3, p. 274
  A diversity reference set has been constructed for the Gossypium accessions in the US National Cotton Germplasm Collection to facilitate more extensive... 
Genetic diversity | Cotton | Cultivars | Polymorphism
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11. Full Text Rational assembly of Pb coordination polymers based on flexible V-shaped dicarboxylate ligand: Syntheses, helical structures and properties
by Yang, Gao-Shan and Liu, Chong-Bo and Liu, Hong and Robbins, Julianne and Zhang, Z. John and Yin, Hong-Shan and Wen, Hui-Liang and Wang, Yu-Hua
Journal of Solid State Chemistry, ISSN 0022-4596, 05/2015, Volume 225, p. 391
Six new coordination polymers, namely, [Pb(L)(H.sub.2O)] (1), [Pb(L)(phen)] (2), [Pb.sub.2(L).sub.2(4,4'-bipy).sub.0.5] (3), [Cd(L)(phen)] (4),... 
Analysis | Polymers | Magnetic properties
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12. Full Text Interaction entropy for protein-protein binding
by Sun, Zhaoxi and Yan, Yu N and Yang, Maoyou and Zhang, John Z. H
The Journal of Chemical Physics, ISSN 0021-9606, 03/2017, Volume 146, Issue 12, p. 124124
Protein-protein interactions are at the heart of signal transduction and are central to the function of protein machine in biology. The highly specific... 
LIGAND INTERACTION | COMPLEX | BARSTAR | BARNASE | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | CHEMISTRY, PHYSICAL | COMPUTER-SIMULATION | MD SIMULATIONS | ELECTROSTATIC CONTRIBUTIONS | FREE-ENERGY PERTURBATION | POISSON-BOLTZMANN EQUATION | MOLECULAR MECHANICS | Protein Binding | Entropy | Proteins - chemistry | Molecular Dynamics Simulation | Proteins | Signal transduction | First principles | Numerical analysis | Computer simulation | Computation | Mathematical analysis | Binding energy | Molecular dynamics | Biology | Free energy
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