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1. Full Text White matter microstructure from nonparametric axon diameter distribution mapping
by Benjamini, Dan and Komlosh, Michal E and Holtzclaw, Lynne A and Nevo, Uri and Basser, Peter J
NeuroImage, ISSN 1053-8119, 07/2016, Volume 135, pp. 333 - 344
We report the development of a double diffusion encoding (DDE) MRI method to estimate and map the axon diameter distribution (ADD) within an imaging volume. A... 
Nonparametric | Axon diameter distribution | Double diffusion encoding | Average axon diameter | MRI | Pore size distribution | Double pulsed field gradient | Empirical | MICROSCOPIC DIFFUSION ANISOTROPY | SPINAL-CORD | PORE-SIZE DISTRIBUTION | NEUROSCIENCES | NEUROIMAGING | RESTRICTED DIFFUSION | PFG | NMR | MULTIPLE-SCLEROSIS | CORPUS-CALLOSUM | RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING | PLASTICITY | Data Interpretation, Statistical | Reproducibility of Results | Image Interpretation, Computer-Assisted - methods | Male | Ferrets | Diffusion Tensor Imaging - methods | White Matter - diagnostic imaging | Algorithms | Animals | Sensitivity and Specificity | Statistical Distributions | Axons - ultrastructure | Image Enhancement - methods | In Vitro Techniques | Pattern Recognition, Automated - methods | White Matter - cytology | Pore size | Traumatic brain injury | Ischemia | Microscopy | Anisotropy | Morphology | Nervous system | Histology | Experiments | Methods
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2. Full Text Axcaliber: A method for measuring axon diameter distribution from diffusion MRI
by Assaf, Yaniv and Blumenfeld‐Katzir, Tamar and Yovel, Yossi and Basser, Peter J
Magnetic Resonance in Medicine, ISSN 0740-3194, 06/2008, Volume 59, Issue 6, pp. 1347 - 1354
The diameter of a myelinated nerve axon is directly proportional to its conduction velocity, so the axon diameter distribution helps determine the channel... 
diffusion | MRI | axon diameter | q‐space | nerve | Nerve | Q-space | Diffusion | Axon diameter | FIELD GRADIENT | WEIGHTED MRI | HUMAN BRAIN | WHITE-MATTER | ANISOTROPIC WATER DIFFUSION | DROPLET SIZE DISTRIBUTIONS | CONDUCTION-VELOCITY | MYELINATED NERVE-FIBERS | PFG-NMR | MAGNETIC-RESONANCE | q-space | RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING | Animals | Magnetic Resonance Spectroscopy - methods | Swine | Staining and Labeling | Axons - ultrastructure | Diffusion Magnetic Resonance Imaging | Sciatic Nerve - ultrastructure | Image Processing, Computer-Assisted - methods | Optic Nerve - ultrastructure | Spinal Cord - ultrastructure
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3. Full Text In vivo measurement of axon diameter distribution in the corpus callosum of rat brain
by Barazany, Daniel and Basser, Peter J and Assaf, Yaniv
Brain, ISSN 0006-8950, 5/2009, Volume 132, Issue 5, pp. 1210 - 1220
Here, we present the first in vivo non-invasive measurement of the axon diameter distribution in the rat corpus callosum. Previously, this measurement was only... 
Brain | Axon diameter distribution | Diffusion | MRI | Corpus callosum | diffusion | WHITE-MATTER | CONDUCTION-VELOCITY | HUMANS | brain | MYELINATED NERVE-FIBERS | NEUROSCIENCES | RESTRICTED DIFFUSION | CLINICAL NEUROLOGY | DEMYELINATION | SPECTROSCOPY | axon diameter distribution | DIFFUSION-TENSOR | corpus callosum | MORPHOLOGY | Animals | Image Processing, Computer-Assisted | Rats, Wistar | Axons - ultrastructure | Rats | Male | Corpus Callosum - ultrastructure | Diffusion Magnetic Resonance Imaging - methods | Microscopy, Electron | Cluster Analysis | Original
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4. Full Text Single‐ and double‐Diffusion encoding MRI for studying ex vivo apparent axon diameter distribution in spinal cord white matter
by Anaby, Debbie and Morozov, Darya and Seroussi, Inbar and Hametner, Simon and Sochen, Nir and Cohen, Yoram
NMR in Biomedicine, ISSN 0952-3480, 12/2019, Volume 32, Issue 12, p. n/a
Mapping average axon diameter (AAD) and axon diameter distribution (ADD) in neuronal tissues non‐invasively is a challenging task that may have a tremendous... 
diffusion MRI | double diffusion encoding (DDE)‐MRI | microstructure | spinal cord | axon diameter | Magnetic resonance spectroscopy | Spinal cord | Magnetic resonance imaging | DDE | Central nervous system | Histology | Mapping | Nitrous oxide | Tissues | Diffusion | Substantia alba | Microstructure
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5. Full Text NODDI: Practical in vivo neurite orientation dispersion and density imaging of the human brain
by Zhang, Hui and Schneider, Torben and Wheeler-Kingshott, Claudia A and Alexander, Daniel C
NeuroImage, ISSN 1053-8119, 07/2012, Volume 61, Issue 4, pp. 1000 - 1016
This paper introduces neurite orientation dispersion and density imaging (NODDI), a practical diffusion MRI technique for estimating the microstructural... 
Neurite density | Diffusion MRI | Microstructure imaging | Orientation dispersion | Gray matter microstructure | White matter microstructure | DIFFUSION-WEIGHTED MRI | WHITE-MATTER | MODEL | NEUROSCIENCES | NEUROIMAGING | CEREBRAL-CORTEX | DEGENERATION | AXON DIAMETER DISTRIBUTION | WATER DIFFUSION | TENSOR MRI | MULTIPLE FIBER ORIENTATIONS | UNCERTAINTY | RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING | Neuroimaging - methods | Brain - cytology | Neurites - ultrastructure | Humans | Image Interpretation, Computer-Assisted | Adult | Male | Brain Mapping - methods | Diffusion Magnetic Resonance Imaging - methods | Brain | Diagnostic imaging | Anisotropy | Specific gravity | Aging | Protocol
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6. Full Text Along-axon diameter variation and axonal orientation dispersion revealed with 3D electron microscopy: implications for quantifying brain white matter microstructure with histology and diffusion MRI
by Lee, HH and Yaros, K and Veraart, J and Pathan, JL and Liang, FX and Kim, SG and Novikov, DS and Fieremans, E
BRAIN STRUCTURE & FUNCTION, ISSN 1863-2653, 05/2019, Volume 224, Issue 4, pp. 1469 - 1488
Tissue microstructure modeling of diffusion MRI signal is an active research area striving to bridge the gap between macroscopic MRI resolution and... 
Fiber orientation distribution | QUANTIFICATION | ANATOMY & MORPHOLOGY | 3d electron microscopy | Axonal diameter distribution | MODEL | 3d axon segmentation | QUANTITATIVE-ANALYSIS | ANISOTROPY | NEUROSCIENCES | Corpus callosum | Axonal diameter variation | DENSITY | DISTRIBUTIONS | SPACE | Diffusion coarse-graining | CONNECTIVITY | CORPUS-CALLOSUM | g-Ratio | Diffusion time-dependence | Axons | Scanning electron microscopy | Learning algorithms | Image processing | Magnetic resonance imaging | Segmentation | Microscopy | Myelin | Histology | Variation | Substantia alba
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7. Full Text Apparent Fibre Density: A novel measure for the analysis of diffusion-weighted magnetic resonance images
by Raffelt, David and Tournier, J.-Donald and Rose, Stephen and Ridgway, Gerard R and Henderson, Robert and Crozier, Stuart and Salvado, Olivier and Connelly, Alan
NeuroImage, ISSN 1053-8119, 02/2012, Volume 59, Issue 4, pp. 3976 - 3994
This article proposes a new measure called Apparent Fibre Density (AFD) for the analysis of high angular resolution diffusion-weighted images using... 
Motor Neurone Disease | Diffusion MRI | Fibre orientation distribution | Amyotrophic Lateral Sclerosis | Spherical deconvolution | Apparent Fibre Density | Amyotrophic lateral sclerosis | Motor neurone disease | Apparent fibre density | RAT SPINAL-CORD | WALLERIAN DEGENERATION | AMYOTROPHIC-LATERAL-SCLEROSIS | ORIENTATION DISTRIBUTIONS | MYELINATED NERVE-FIBERS | NEUROSCIENCES | NEUROIMAGING | VOXEL-BASED MORPHOMETRY | AXON DIAMETER DISTRIBUTION | WATER DIFFUSION | TENSOR MRI | RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING | Female | Male | Image Processing, Computer-Assisted | Humans | Diffusion Magnetic Resonance Imaging | Motor Neuron Disease - pathology | Magnetic resonance imaging | Monte Carlo method | Attention deficit disorder | Studies | Software | Diffusion | Anisotropy | Registration
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8. Full Text Parametric probability distribution functions for axon diameters of corpus callosum
by Sepehrband, Farshid and Alexander, Daniel C and Clark, Kristi A and Kurniawan, Nyoman D and Yang, Zhengyi and Reutens, David C
Frontiers in Neuroanatomy, ISSN 1662-5129, 2016, Volume 10, Issue MAY, p. 59
Axon diameter is an important neuroanatomical characteristic of the nervous system that alters in the course of neurological disorders such as multiple... 
Gamma distribution | Probability distribution function | Axon diameter distribution | Electron microscopy | Generalized extreme value distribution | Corpus callosum | probability distribution function | generalized extreme value distribution | gamma distribution | WHITE-MATTER | axon diameter distribution | ANATOMY & MORPHOLOGY | DIFFUSION MRI | electron microscopy | corpus callosum | NEUROSCIENCES | BRAIN | Multiple sclerosis | Analysis | Distribution (Probability theory) | Performance evaluation | Subpopulations | Nervous system | Mathematical functions | Probability distribution | Anatomy | Neurological diseases | Autism | Axons | Magnetic resonance imaging | Microscopy | Corpus Callosum
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9. Full Text The Human Connectome Project and beyond: Initial applications of 300 mT/m gradients
by McNab, JA and Edlow, BL and Witzel, T and Huang, SY and Bhat, H and Heberlein, K and Feiweier, T and Liu, KC and Keil, B and Cohen-Adad, J and Tisdall, MD and Folkerth, RD and Kinney, HC and Wald, LL
NEUROIMAGE, ISSN 1053-8119, 10/2013, Volume 80, pp. 234 - 245
The engineering of a 3 T human MRI scanner equipped with 300 mT/m gradients - the strongest gradients ever built for an in vivo human MRI scanner - was a major... 
Human connectome | HEAD-INJURY | Consciousness | Tractography | Traumatic coma | Postmortem | AMYOTROPHIC-LATERAL-SCLEROSIS | THALAMIC INTRALAMINAR NUCLEI | NEUROSCIENCES | NEUROIMAGING | Corpus callosum | RETICULAR-FORMATION | In vivo | AXON DIAMETER DISTRIBUTION | TRAUMATIC BRAIN-INJURY | CORPUS-CALLOSUM | Diffusion MRI | ASCENDING AROUSAL SYSTEM | PLACEBO-CONTROLLED TRIAL | RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING | Axon diameter | Brain - cytology | Humans | Male | Brain - physiology | Nerve Net - physiology | Nerve Net - cytology | Diffusion Tensor Imaging - methods | Young Adult | Pilot Projects | Animals | Connectome - methods | Adult | Female | Image Enhancement - methods | Models, Neurological | Models, Anatomic | traumatic coma | tractography | consciousness | postmortem | diffusion MRI | in vivo | corpus callosum | human connectome | axon diameter
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10. Full Text Compartment models of the diffusion MR signal in brain white matter: A taxonomy and comparison
by Panagiotaki, Eleftheria and Schneider, Torben and Siow, Bernard and Hall, Matt G and Lythgoe, Mark F and Alexander, Daniel C
NeuroImage, ISSN 1053-8119, 02/2012, Volume 59, Issue 3, pp. 2241 - 2254
This paper aims to identify the minimum requirements for an accurate model of the diffusion MR signal in white matter of the brain. We construct a taxonomy of... 
Diffusion MRI | Microstructure imaging | Compartment models | White matter | Axon diameter | DESIGN | PARAMETERS | NEUROSCIENCES | NEUROIMAGING | DENSITY | NMR | AXON DIAMETER DISTRIBUTION | WATER DIFFUSION | FRAMEWORK | SPIN-ECHO | RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING | Brain - cytology | Brain - anatomy & histology | Rats | Terminology as Topic | Male | Axons - physiology | Models, Statistical | Rats, Sprague-Dawley | Diffusion Tensor Imaging - methods | Algorithms | Animals | Image Processing, Computer-Assisted | Axons - ultrastructure | Bayes Theorem | Classification | Water - chemistry | Brain Chemistry | Tissue Fixation | Models, Anatomic | Brain | Models | Medical research | Nuclear magnetic resonance--NMR | Diffusion
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11. Full Text White matter characterization with diffusional kurtosis imaging
by Fieremans, Els and Jensen, Jens H and Helpern, Joseph A
Neuroimage, ISSN 1053-8119, 2011, Volume 58, Issue 1, pp. 177 - 188
Diffusional kurtosis imaging (DKI) is a clinically feasible extension of diffusion tensor imaging that probes restricted water diffusion in biological tissues... 
Axonal density | Kurtosis | Diffusion | Microstructure | MRI | White matter | NERVOUS-SYSTEM | MYELIN WATER | HUMAN BRAIN | SELF-DIFFUSION | NEUROSCIENCES | NEUROIMAGING | TENSOR | AXON DIAMETER DISTRIBUTION | IN-VIVO | MAGNETIC-RESONANCE | RAT-BRAIN | GAUSSIAN WATER DIFFUSION | RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING | Brain - cytology | Data Interpretation, Statistical | Body Water - physiology | Brain - anatomy & histology | Humans | Male | Axons - physiology | Image Processing, Computer-Assisted - methods | Normal Distribution | Diffusion Tensor Imaging - methods | Algorithms | Nerve Fibers - physiology | Axons - ultrastructure | Adult | Female | Models, Neurological | Anisotropy | Diagnostic imaging | Attention deficit disorder | Brain | Permeability | White Matter | microstructure | kurtosis | axonal density
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