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1. Full Text N3 Protonation Induces Base Rotation of 2 '-Deoxyadenosine-5 '-monophosphate and Adenosine-5 '-monophosphate
by Wu, R.R and He, C.C and Hamlow, L.A and Nei, Y.w and Berden, G and Oomens, J and Rodgers, M.T
Journal of Physical Chemistry B: Condensed Matter, Materials, Surfaces, Interfaces and Biophysical, ISSN 1520-6106, 2016, Volume 120, Issue 20, pp. 4616 - 4624
Infrared multiple photon dissociation (IRMPD) action spectroscopy experiments combined with theoretical calculations are performed to investigate the stable... 
GAS-PHASE CONFORMATIONS | MONONUCLEOTIDES | DISSOCIATION ACTION SPECTROSCOPY | ADENINE-NUCLEOTIDES | CYCLIC 3',5'-ADENOSINE-MONOPHOSPHATE | COMPLEXES | CHEMISTRY, PHYSICAL | INFRARED-SPECTROSCOPY | BINDING-SITES | MASS-SPECTROMETRY | AQUEOUS-SOLUTION | Protons | Spectrophotometry, Infrared | Deoxyadenine Nucleotides - chemistry | Hydrogen Bonding | Nitrogen - chemistry | Adenosine Monophosphate - chemistry | Infrared spectroscopy | Usage | Chemical properties | Adenylic acid | Index Medicus | Phosphates | Mathematical analysis | Nucleosides | Protonation | Photons | Spectra | Adenines
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2. Full Text Hydrogels Based on Ag+‐Modulated Assembly of 5′‐Adenosine Monophosphate for Enriching Biomolecules
by Hu, Yuanyuan and Xie, Dong and Wu, Yang and Lin, Nangui and Song, Aixin and Hao, Jingcheng
Chemistry – A European Journal, ISSN 0947-6539, 11/2017, Volume 23, Issue 62, pp. 15721 - 15728
Supramolecular hydrogels obtained by combining 5′‐adenosine monophosphate (AMP) with Ag + were fabricated in this work. Their gelation capability was enhanced... 
pi stacking | self-assembly | silver | gels | nucleobases | NANOCRYSTALS | COORDINATION | CHEMISTRY, MULTIDISCIPLINARY | NANOCLUSTERS | PLATFORM | NANOPARTICLES | NUCLEOBASE | DISCRIMINATION | Nanofibers - chemistry | Microscopy, Electron, Transmission | Photoelectron Spectroscopy | Temperature | Metal Nanoparticles - chemistry | Adenosine Monophosphate - chemistry | Silver - chemistry | Spectroscopy, Fourier Transform Infrared | Ultraviolet Rays | Hydrogen Bonding | Light | Ligands | Rheology - radiation effects | Circular Dichroism | Hydrogels - chemistry | Hydrogen-Ion Concentration | Silver | Biotechnology | Adenosine | Biochemistry | Adenylic acid | Hydrogen | Enrichment | Photosensitivity | Self assembly | Adenosine monophosphate | Gels | Hydrogels | AMP | Gelation | pH effects | Hydrogen bonding | Nanoparticles | Self-assembly | Chemical bonds | Biomolecules | Nanofibers | Bonding | Index Medicus
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3. Full Text Recognition of Adenosine Monophosphate and H2PO4- using Zinc Ensemble of New Hexaphenylbenzene Derivative: Potential Bioprobe and Multichannel Keypad System
by Bhalla, V and Vij, V and Kumar, M and Sharma, PR and Kaur, T
ORGANIC LETTERS, ISSN 1523-7060, 02/2012, Volume 14, Issue 4, pp. 1012 - 1015
Zinc ensemble of hexaphenylbenzene derivative 3 exhibits sensitive response toward adenosine monophosphate (AMP) and H2PO4- ions. Further, the application of... 
PHOSPHATE | CHEMISTRY, ORGANIC | SENSOR | RECEPTORS | PYROPHOSPHATE | WATER | Ions - chemistry | Adenosine Monophosphate - chemistry | Biosensing Techniques | Phosphoric Acids - chemistry | Benzene - chemistry | Molecular Structure | Zinc - chemistry | Index Medicus
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4. Full Text Highly selective binding of organometallic ruthenium ethylenediamine complexes to nucleic acids: Novel recognition mechanisms
by Chen, Haimei and Parkinson, John A and Morris, Robert E and Sadler, Peter J
Journal of the American Chemical Society, ISSN 0002-7863, 01/2003, Volume 125, Issue 1, pp. 173 - 186
We have investigated the recognition of nucleic acid derivatives by organometallic ruthenium(II) arene anticancer complexes of the type... 
P-31 NMR | COORDINATION CHEMISTRY | ALPHA-PO4 CHELATION | NMR EVIDENCE | PENTAAMMINERUTHENIUM(III) COMPLEXES | TETRAAMINE COMPLEX | DOUBLE-STRANDED DNA | PLATINUM ANTICANCER DRUGS | CHEMISTRY, MULTIDISCIPLINARY | MOLECULAR MECHANICS | AQUEOUS-SOLUTION | Guanosine Monophosphate - chemistry | Thymidine Monophosphate - chemistry | Adenosine Monophosphate - chemistry | Substrate Specificity | Ruthenium - chemistry | Nucleotides - chemistry | Nucleic Acids - chemistry | Cyclic GMP - chemistry | Nuclear Magnetic Resonance, Biomolecular | Nucleosides - metabolism | Adenosine - chemistry | Ethylenediamines - metabolism | Ruthenium - metabolism | Inosine - chemistry | Nucleosides - chemistry | Thymidine Monophosphate - metabolism | Adenosine Monophosphate - metabolism | Ethylenediamines - chemistry | Inosine - metabolism | Inosine Monophosphate - metabolism | Nucleic Acids - metabolism | Nucleotides - metabolism | Inosine Monophosphate - chemistry | Cyclic GMP - metabolism | Organometallic Compounds - metabolism | Guanosine Monophosphate - metabolism | Adenosine - metabolism | Organometallic Compounds - chemistry | Kinetics | Chemical properties | Nucleic acids | Ethylenediamines | Organometallic compounds | Index Medicus
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5. Full Text Self-healing metal-coordinated hydrogels using nucleotide ligands
by Liang, Hao and Zhang, Zijie and Yuan, Qipeng and Liu, Juewen
Chemical Communications, ISSN 1359-7345, 08/2015, Volume 51, Issue 82, pp. 15196 - 15199
A supramolecular gel formed by coordination of Zn2+ with adenosine monophosphate (AMP) is reported. The adenine base, themonophosphate, and Zn2+ are all... 
NANOPARTICLES | NUCLEOBASE | DRUG-DELIVERY | STABILITY | POLYMER | BRANCHED POLYOXAZOLINE COMPLEX | REVERSIBLE HYDROGEL | RELEASE | CHEMISTRY, MULTIDISCIPLINARY | INDUCED GEL FORMATION | MOLECULES | Guanosine Monophosphate - chemistry | Temperature | Adenosine Monophosphate - chemistry | Zinc - chemistry | Coordination Complexes - chemistry | Cytidine Monophosphate - chemistry | Animals | Osmolar Concentration | Cattle | Ligands | Serum Albumin, Bovine - chemistry | Rhodamines - chemistry | Fluorescein - chemistry | Hydrogels - chemistry | Hydrogen-Ion Concentration | Index Medicus | Entrapment | Adenosine monophosphate | Hydrogels | Formations | Adenines | Nucleotides
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6. Full Text Characterization of the structures of phosphodiesterase 10 binding with adenosine 3′,5′-monophosphate and guanosine 3′,5′- monophosphate by hybrid quantum mechanical/molecular mechanical calculations
by Lu, Haiting and Goren, Alan C and Zhan, Chang-Guo
Journal of Physical Chemistry B, ISSN 1520-6106, 05/2010, Volume 114, Issue 20, pp. 7022 - 7028
Quantum mechanical/molecular mechanical (QM/MM) geometry optimizations of the X-ray crystal structures of PDE10-AMP (PDB code 2OUN) and PDE10-GMP (PDB code... 
AMIDE ROTAMERS | ASPARAGINE | PROTEIN CRYSTAL-STRUCTURES | PDE10A | GLUTAMINE | CYCLIC-NUCLEOTIDE PHOSPHODIESTERASES | ORIENTATION | CHEMISTRY, PHYSICAL | NQ-FLIPPER | SELECTIVITY | CAMP | Guanosine Monophosphate - chemistry | Thermodynamics | Quantum Theory | Cyclic AMP - chemistry | Hydrogen Bonding | Cyclic GMP - chemistry | Humans | Adenosine Monophosphate - chemistry | Protein Binding | Crystallography, X-Ray | Phosphoric Diester Hydrolases - chemistry | X-ray crystallography | Usage | Analysis | Amides | Enzyme binding | Chemical properties | Adenylic acid | Structure | Phosphodiesterases | Hydrogen bonding | Quantum theory | Index Medicus
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7. Full Text Gas-phase spectroscopy of protonated adenine, adenosine 5′-monophosphate and monohydrated ions
by Pedersen, Sara Øvad and Støchkel, Kristian and Byskov, Camilla Skinnerup and Baggesen, Lisbeth Munksgaard and Nielsen, Steen Brøndsted
Physical Chemistry Chemical Physics, ISSN 1463-9076, 10/2013, Volume 15, Issue 45, pp. 19748 - 19752
Microsolvation of chromophore ions commonly has large effects on their electronic structure and as a result on their optical absorption spectra. Here... 
ANIONS | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | ELECTRON PHOTODETACHMENT DISSOCIATION | CHEMISTRY, PHYSICAL | TAUTOMERS | ABSORPTION | SPECTRA | WATER | Protons | Spectrum Analysis | Adenine - chemistry | Adenosine Monophosphate - chemistry | Water - chemistry | Index Medicus | Low energy | Spectroscopy | Wavelengths | Adenosines | Photodissociation | Absorption spectra | Adenines | Channels
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8. Full Text Colorimetric detection of mercury(II) in a high-salinity solution using gold nanoparticles capped with 3-mercaptopropionate acid and adenosine monophosphate
by Yu, Cheng-Ju and Tseng, Wei-Lung
Langmuir, ISSN 0743-7463, 11/2008, Volume 24, Issue 21, pp. 12717 - 12722
A new colorimetric sensor for sensing Hg2+ in a high-salinity solution has been developed using gold nanoparticles (AuNPs) decorated with 3-mercaptopropionate... 
TURN-ON | AQUEOUS-SOLUTIONS | DNA | NANOCRYSTALS | SILVER | CHEMISTRY, PHYSICAL | FLUORESCENT SENSORS | HG2+ IONS | BINDING | PROBES | Gold - chemistry | Mercury - analysis | Solutions | Adenosine Monophosphate - chemistry | 3-Mercaptopropionic Acid - chemistry | Colorimetry | Spectrophotometry, Ultraviolet | Metal Nanoparticles | Index Medicus
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9. Full Text Multiple Decay Mechanisms and 2D‐UV Spectroscopic Fingerprints of Singlet Excited Solvated Adenine‐Uracil Monophosphate
by Li, Quansong and Giussani, Angelo and Segarra‐Martí, Javier and Nenov, Artur and Rivalta, Ivan and Voityuk, Alexander A and Mukamel, Shaul and Roca‐Sanjuán, Daniel and Garavelli, Marco and Blancafort, Lluís
Chemistry – A European Journal, ISSN 0947-6539, 05/2016, Volume 22, Issue 22, pp. 7497 - 7507
The decay channels of singlet excited adenine uracil monophosphate (ApU) in water are studied with CASPT2//CASSCF:MM potential energy calculations and... 
ab initio calculations | molecular electronics | photophysics | UV/Vis spectroscopy | DNA | AB-INITIO SIMULATIONS | 1ST-PRINCIPLES SIMULATION | MOLECULAR-DYNAMICS | CHEMISTRY, MULTIDISCIPLINARY | NUCLEIC-ACIDS | BASE-STACKING | STATE DYNAMICS | LIGHT-HARVESTING COMPLEX | FOURIER-TRANSFORM SPECTROSCOPY | ULTRAFAST INTERNAL-CONVERSION | 2-DIMENSIONAL ELECTRONIC SPECTROSCOPY | Models, Molecular | Uridine Monophosphate - chemistry | Spectrophotometry, Ultraviolet - methods | DNA Fingerprinting - methods | Adenosine Monophosphate - chemistry | Purines | Pyrimidines | Hydrogen | Sugars | Force and energy | Monosaccharides | Spectrum analysis | Potential energy | Backbone | Spectroscopy | Fingerprints | Adenine | Ground state | Minima | Intersections | Dynamical systems | Channels | Complexity | Electron states | Energy | Simulation | Ribose | Mathematical analysis | Decay | Evolution | Yield | Excitation spectra | Uracil | Conformation | Index Medicus | Spectra | Adenines | Electrònica molecular | Molecular electronics | Molecular spectroscopy | Quantum chemistry | Química quàntica | Espectroscòpia molecular | Spectrophotometry | Espectrofotometria | or physical chemistry | Chemical Sciences | Theoretical and | Full Paper | Full Papers | Vis spectroscopy
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10. Full Text Dielectric spectra broadening as a signature for dipole-matrix interaction. III. Water in adenosine monophosphate/adenosine-5 '-triphosphate solutions
by Puzenko, A and Levy, E and Shendrik, A and Talary, MS and Caduff, A and Feldman, Y
JOURNAL OF CHEMICAL PHYSICS, ISSN 0021-9606, 11/2012, Volume 137, Issue 19, pp. 194502 - 194502
In this, the third part of our series on the dielectric spectrum symmetrical broadening of water, we consider the nucleotide aqueous solutions. Where in Parts... 
SYSTEM | CHEMISTRY, PHYSICAL | AQUEOUS-SOLUTIONS | SPECTROSCOPY | BOUND WATER | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | Models, Chemical | Spectrum Analysis - methods | Computer Simulation | Adenosine Monophosphate - chemistry | Water - chemistry | Adenosine Triphosphate - chemistry | Solutions - chemistry | Index Medicus | Solvents | Adenosine monophosphate | Aqueous solutions | Spectra | Dielectrics | High frequencies | Nucleotides | Three dimensional
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11. Full Text Synthesis and Deprotection of Biodegradably and Thermally Protected Dinucleoside‐2′,5′‐Monophosphate Prodrug Model of 2‐5A
by Kiuru, Emilia and Malmikare, Suvi and Ora, Mikko
Chemistry & Biodiversity, ISSN 1612-1872, 09/2017, Volume 14, Issue 9, pp. e1700220 - n/a
Protected dinucleoside‐2′,5′‐monophosphate has been prepared to develop a prodrug strategy for 2‐5A. The removal of enzymatically and thermally labile... 
Protecting group | Prodrugs | Nucleotides | 2‐5A | Deprotection | 2-5A | RNASE-L | ANALOGS | BIOCHEMISTRY & MOLECULAR BIOLOGY | CHEMISTRY, MULTIDISCIPLINARY | TRIMERIC CORDYCEPIN | BIOLOGICAL-ACTIVITY | PROSTATE-CANCER | HIV-1 REPLICATION | PHOSPHATASE-RESISTANT | ENZYMATIC DEPROTECTION | DERIVATIVES | Adenosine Monophosphate - chemistry | Prodrugs - chemical synthesis | Dinucleoside Phosphates - chemical synthesis | Prodrugs - chemistry | Chromatography, High Pressure Liquid | Adenosine Monophosphate - chemical synthesis | Dimerization | Dinucleoside Phosphates - chemistry | Isomerization | Analysis | Phosphates | Liquid chromatography | AMP | High-performance liquid chromatography | pH effects | Index Medicus
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12. Full Text Structural basis of AMPK regulation by small molecule activators
by Xiao, Bing and Sanders, Matthew J and Carmena, David and Bright, Nicola J and Haire, Lesley F and Underwood, Elizabeth and Patel, Bhakti R and Heath, Richard B and Walker, Philip A and Hallen, Stefan and Giordanetto, Fabrizio and Martin, Stephen R and Carling, David and Gamblin, Steven J
Nature Communications, ISSN 2041-1723, 12/2013, Volume 4, Issue 1, pp. 3017 - 3017
AMP-activated protein kinase (AMPK) plays a major role in regulating cellular energy balance by sensing and responding to increases in AMP/ADP concentration... 
SNF1 PROTEIN-KINASE | RAT-LIVER | MECHANISM | MULTIDISCIPLINARY SCIENCES | DISEASE | COMPLEXES | UPSTREAM KINASE | ACETYL-COA CARBOXYLASE | HEALTH | YEAST SNF1 | BETA | Protein Structure, Tertiary | Phosphorylation | Threonine - chemistry | Humans | Adenosine Monophosphate - chemistry | Recombinant Proteins - chemistry | Crystallography, X-Ray | AMP-Activated Protein Kinases - chemistry | Gene Expression Regulation, Enzymologic | Carbohydrates - chemistry | Allosteric Site | HEK293 Cells | Protein Binding | Adenosine Triphosphate - chemistry | Binding Sites | Circular Dichroism | Interferometry | Index Medicus
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13. Full Text N (6)-substituted AMPs inhibit mammalian deoxynucleotide N-hydrolase DNPH1
by Amiable, Claire and Pochet, Sylvie and Padilla, André and Labesse, Gilles and Kaminski, Pierre Alexandre
PloS one, ISSN 1932-6203, 2013, Volume 8, Issue 11, p. e80755
The gene dnph1 (or rcl) encodes a hydrolase that cleaves the 2'-deoxyribonucleoside 5'-monophosphate (dNMP) N-glycosidic bond to yield a free nucleobase and... 
Humans | Molecular Conformation | Adenosine Monophosphate - chemistry | Molecular Sequence Data | Proto-Oncogene Proteins - chemistry | N-Glycosyl Hydrolases - chemistry | Thermodynamics | Adenosine Monophosphate - pharmacology | Nuclear Proteins - genetics | Proto-Oncogene Proteins - metabolism | Amino Acid Sequence | Catalytic Domain | Adenosine Monophosphate - metabolism | Models, Molecular | Rats | Nuclear Proteins - metabolism | Proto-Oncogene Proteins - genetics | N-Glycosyl Hydrolases - genetics | Enzyme Activation - drug effects | Nuclear Proteins - chemistry | N-Glycosyl Hydrolases - metabolism | Sequence Alignment | Animals | Adenosine Monophosphate - analogs & derivatives | Protein Binding | Kinetics | Nuclear Proteins/chemistry | Proto-Oncogene Proteins/genetics | Adenosine Monophosphate/pharmacology | Life Sciences | Adenosine Monophosphate/analogs & derivatives | N-Glycosyl Hydrolases/metabolism | Nuclear Proteins/metabolism | Nuclear Proteins/genetics | N-Glycosyl Hydrolases/genetics | Enzyme Activation/drug effects | N-Glycosyl Hydrolases/chemistry | Proto-Oncogene Proteins/chemistry | Biochemistry, Molecular Biology | Proto-Oncogene Proteins/metabolism | Adenosine Monophosphate/chemistry | Adenosine Monophosphate/metabolism
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14. Full Text Adenosine Monophosphate Binding Stabilizes the KTN Domain of the Shewanella denitrificans Kef Potassium Efflux System
by Pliotas, Christos and Grayer, Samuel C and Ekkerman, Silvia and Chan, Anthony K. N and Healy, Jess and Marius, Phedra and Bartlett, Wendy and Khan, Amjad and Cortopassi, Wilian A and Chandler, Shane A and Rasmussen, Tim and Benesch, Justin L. P and Paton, Robert S and Claridge, Timothy D. W and Miller, Samantha and Booth, Ian R and Naismith, James H and Conway, Stuart J
Biochemistry, ISSN 0006-2960, 08/2017, Volume 56, Issue 32, pp. 4219 - 4234
Ligand binding is one of the most fundamental properties of proteins. Ligand functions fall into three basic types: substrates, regulatory molecules, and... 
ACTIVATION | THIOL | MECHANISM | BIOCHEMISTRY & MOLECULAR BIOLOGY | ESCHERICHIA-COLI | K+ CHANNEL | BACILLITHIOL | SUBUNIT | Potassium-Hydrogen Antiporters - genetics | Adenosine Monophosphate - genetics | Adenosine Monophosphate - metabolism | Shewanella - genetics | Protein Multimerization | Adenosine Monophosphate - chemistry | Potassium-Hydrogen Antiporters - metabolism | Shewanella - metabolism | Protein Folding | Protein Structure, Quaternary | Protein Binding | Protein Domains | Potassium-Hydrogen Antiporters - chemistry | Protein Stability | Shewanella - chemistry | Chemical bonds | Denitrification | Research | Adenylic acid | Analysis | Index Medicus
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15. Full Text Adenosine Monophosphate Forms Ordered Arrays in Multilamellar Lipid Matrices: Insights into Assembly of Nucleic Acid for Primitive Life
by Toppozini, Laura and Dies, Hannah and Deamer, David W and Rheinstädter, Maikel C
PLoS ONE, ISSN 1932-6203, 05/2013, Volume 8, Issue 5, pp. e62810 - e62810
A fundamental question of biology is how nucleic acids first assembled and then were incorporated into the earliest forms of cellular life 4 billion years ago.... 
MACROMOLECULES | CRYSTAL-STRUCTURE | MULTIDISCIPLINARY SCIENCES | ENCAPSULATION | MEMBRANES | MEDIA | POLYMERIZATION | TEMPLATE | Ribose - metabolism | Adenosine Monophosphate - metabolism | Molecular Conformation | Adenosine Monophosphate - chemistry | Models, Molecular | Phospholipids - chemistry | DNA - metabolism | RNA - chemistry | DNA - chemistry | Phosphates - metabolism | Lipid Bilayers - chemistry | Lipid Bilayers - metabolism | Phospholipids - metabolism | RNA - metabolism | Oligomers | Enzymes | Adenosine | RNA | Polymerization | Adenylic acid | Sugars | Monosaccharides | Phosphates | Membranes | Lipids | Condensation polymerization | Phospholipids | Nucleotides | Condensation | Phase transitions | X-ray scattering | Dimyristoylphosphatidylcholine | Ribose | Chemical bonds | Polymers | Chemical synthesis | Adenosine monophosphate | Hydration | AMP | Nucleic acids | Ribonucleic acid--RNA | Physics | Prebiotics | Studies | Phosphodiester bonds | Acids | X ray scattering | Astronomy | Index Medicus | Ribonucleic acid
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