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1. Full Text Desulfuration of 2-thiouridine with hydrogen peroxide in the physiological pH range 6.6a7.6 is pH-dependent and results in two distinct products
by Sochacka, Elzbieta and Bartos, Paulina and Kraszewska, Karina and Nawrot, Barbara
Bioorganic & medicinal chemistry letters, ISSN 0960-894X, 11/2013, Volume 23, Issue 21, pp. 5803 - 5805
Anticodons
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2. Full Text Anticodon Loop Modifications Modulate Structural Flexibility in E. coli tRNA super(Arg1, 2) that Lacks a U-turn Conformation in Solution
by Cantara, WA and Bilbille, Y and Kim, J and Malkiewicz, A and Agris, PF
Journal of biomolecular structure & dynamics, ISSN 0739-1102, 06/2011, Volume 28, Issue 6, pp. 1072 - 1072
Anticodons
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3. Full Text Ensemble cryo-EM elucidates the mechanism of translation fidelity
by Loveland, Anna B and Demo, Gabriel and Grigorieff, Nikolaus and Korostelev, Andrei A
Nature (London), ISSN 0028-0836, 06/2017, Volume 546, Issue 7656, pp. 113 - 117
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Anticodon - ultrastructure | Ribosome Subunits - chemistry | Protein Biosynthesis | Anticodon - chemistry | Ribosomes - metabolism | RNA, Ribosomal, 16S - ultrastructure | GTP Phosphohydrolases - ultrastructure | Guanosine Triphosphate - metabolism | RNA, Transfer, Amino Acyl - metabolism | Protein Domains | Codon - genetics | RNA, Transfer, Amino Acyl - ultrastructure | RNA, Ribosomal, 16S - metabolism | Anticodon - genetics | Ribosomes - chemistry | Models, Molecular | RNA, Transfer, Amino Acyl - genetics | Escherichia coli - chemistry | Peptide Elongation Factor Tu - ultrastructure | Cryoelectron Microscopy | Hydrolysis | Peptide Elongation Factor Tu - metabolism | Codon - ultrastructure | Ribosomes - ultrastructure | Codon - chemistry | GTP Phosphohydrolases - metabolism | Escherichia coli - genetics | Ribosome Subunits - ultrastructure | RNA, Ribosomal, 16S - genetics | Escherichia coli - ultrastructure | Ribosome Subunits - metabolism | RNA sequencing | Messenger RNA | Physiological aspects | Observations | Genetic translation | Methods | Transfer RNA | Binding | Fidelity | Anticodons | High resolution | tRNA | Molecular structure | Ricin | Ribosomes | Elongation factor EF-Tu | Decoding | Ribonucleic acid--RNA | Intermediates | Proteins | Docks | Guanosine triphosphate | Microscopy | Elongated structure | Accommodation | Codons | Molecular biology | Binding sites | Elongation | Conformation | Index Medicus
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4. Full Text Recognition of Cognate Transfer RNA by the 30S Ribosomal Subunit
by James M. Ogle and Ditlev E. Brodersen and William M. Clemons and Michael J. Tarry and Andrew P. Carter and V. Ramakrishnan
Science (American Association for the Advancement of Science), ISSN 0036-8075, 5/2001, Volume 292, Issue 5518, pp. 897 - 902
Messenger RNA | Hydrogen bonds | RNA | Antibiotics | Protein synthesis | Ribosomes | Crystals | Research Articles | Codons | Anticodon | Transfer RNA | Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | Structure in molecular biology | Molecular biophysics | Crystalline structure | Codon - metabolism | Anticodon - metabolism | Protein Biosynthesis | Peptide Chain Elongation, Translational | RNA, Transfer, Phe - chemistry | Anticodon - chemistry | RNA, Transfer, Amino Acid-Specific - metabolism | Ribosomes - metabolism | Thermus thermophilus - metabolism | Crystallography, X-Ray | Thermus thermophilus - ultrastructure | Guanosine Triphosphate - metabolism | RNA, Messenger - metabolism | Paromomycin - pharmacology | Thermodynamics | Nucleic Acid Conformation | RNA, Transfer - chemistry | Binding Sites | RNA, Bacterial - metabolism | RNA, Ribosomal, 16S - metabolism | RNA, Transfer, Phe - metabolism | Thermus thermophilus - chemistry | RNA, Transfer - metabolism | Ribosomes - chemistry | Models, Molecular | Anti-Bacterial Agents - metabolism | Peptide Elongation Factor Tu - metabolism | RNA, Transfer, Amino Acid-Specific - chemistry | RNA, Ribosomal, 16S - chemistry | Ribosomes - ultrastructure | Codon - chemistry | Base Pairing | Hydrogen Bonding | RNA, Bacterial - chemistry | RNA, Messenger - chemistry | Anti-Bacterial Agents - pharmacology | Paromomycin - metabolism | Protein research | Usage | Polypeptides | Amino acids | Research | Molecular biology | Statistics | Ribonucleic acid--RNA | Ribonucleic acid | ribosomal subunit 30S | paromomysin | Index Medicus
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5. Full Text tRNA’s Wobble Decoding of the Genome: 40 Years of Modification
by Agris, Paul F and Vendeix, Franck A.P and Graham, William D
Journal of molecular biology, ISSN 0022-2836, 2007, Volume 366, Issue 1, pp. 1 - 13
protein synthesis | anticodon structure | decoding the genome | codon recognition | anticodon-codon wobble interaction | Life Sciences & Biomedicine | Biochemistry & Molecular Biology | Science & Technology | Genetic Code | RNA Processing, Post-Transcriptional | Anticodon - chemistry | Ribosomes - chemistry | Models, Molecular | Molecular Sequence Data | Structure-Activity Relationship | Codon - chemistry | Base Pairing | Base Sequence | RNA, Transfer - genetics | Models, Genetic | Codon - genetics | Genome | RNA, Transfer - chemistry | Genomics | Index Medicus
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6. Full Text Human tRNALys3UUU Is Pre-Structured by Natural Modifications for Cognate and Wobble Codon Binding through Keto–Enol Tautomerism
by Vendeix, Franck A.P and Murphy, Frank V and Cantara, William A and Leszczyńska, Grażyna and Gustilo, Estella M and Sproat, Brian and Malkiewicz, Andrzej and Agris, Paul F and Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Journal of molecular biology, ISSN 0022-2836, 03/2012, Volume 416, Issue 4, pp. 467 - 485
wobble decoding | anticodon structure | tRNALys3 | modifications | tRNA
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7. Full Text Favored and less favored codon-anticodon duplexes arising from the GC codon family box encoding for alanine: some computational perspectives
by Devi, Martina and Lyngdoh, R.H. Duncan
Journal of biomolecular structure & dynamics, ISSN 0739-1102, 03/2018, Volume 36, Issue 4, pp. 1029 - 1049
codon-anticodon duplex stability | favored codons | alanine anticodons | Alanine GC codon box | wobble base pair configuration | codon–anticodon duplex stability | Biochemistry & Molecular Biology | Biophysics | Life Sciences & Biomedicine | Science & Technology | Codon - chemistry | Alanine - genetics | Base Pairing | Hydrogen Bonding | Anticodon - genetics | Anticodon - chemistry | Computational Biology | Alanine - chemistry | Codon - genetics | Nucleic Acid Conformation | Index Medicus
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8. Full Text Nucleoside modifications in the regulation of gene expression: focus on tRNA
by Duechler, Markus and Leszczyńska, Grażyna and Sochacka, Elzbieta and Nawrot, Barbara
Cellular and molecular life sciences : CMLS, ISSN 1420-682X, 8/2016, Volume 73, Issue 16, pp. 3075 - 3095
Life Sciences | Biochemistry, general | Stress signaling | Life Sciences, general | tRNA | Regulation of gene expression | Modified nucleosides | Translation rate | Biomedicine general | Cell Biology | Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Science & Technology | Codon - metabolism | Anticodon - metabolism | Nucleosides - chemistry | Protein Biosynthesis | Genetic Code | Anticodon - genetics | RNA, Transfer - metabolism | Humans | Anticodon - chemistry | Gene Expression Regulation | Stress, Physiological | Models, Molecular | Animals | Codon - chemistry | Base Pairing | RNA, Transfer - genetics | Nucleosides - metabolism | Codon - genetics | Nucleosides - genetics | Nucleic Acid Conformation | RNA, Transfer - chemistry | Proteins | RNA | Genes | Nucleosides | Heat shock proteins | Genetic research | Protein biosynthesis | Genetic translation | Ribonucleic acid--RNA | Gene expression | Deoxyribonucleic acid--DNA | Stress | Index Medicus | Review
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