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The Plant cell, ISSN 1040-4651, 11/2012, Volume 24, Issue 11, pp. 4465 - 4482
.... Phenylpropanoid metabolism has to direct up to 30% of the carbon fixed by plants to the biosynthesis of lignin precursors... 
Proteins | Enzymes | Lignin | Protein metabolism | Sterols | RESEARCH ARTICLES | Hematocrit | Fluorescence | Cytochromes | Plants | Plant cells | ENDOPLASMIC-RETICULUM MEMBRANE | MOLECULAR-INTERACTIONS | ARABIDOPSIS-THALIANA | BIOCHEMISTRY & MOLECULAR BIOLOGY | CINNAMIC ACID | PHENYLALANINE AMMONIA-LYASE | CYTOCHROME P450 REDUCTASE | PLANT SCIENCES | CELL BIOLOGY | PHENYLPROPANOID PATHWAY | TANDEM AFFINITY PURIFICATION | ENZYME COMPLEXES | BINDING PROTEIN-1 | Green Fluorescent Proteins | Protein Multimerization | Cytochrome P-450 Enzyme System - metabolism | Endoplasmic Reticulum - metabolism | Trans-Cinnamate 4-Monooxygenase - genetics | Acyltransferases - metabolism | Recombinant Fusion Proteins | Coenzyme A Ligases - metabolism | Arabidopsis Proteins - metabolism | Trans-Cinnamate 4-Monooxygenase - metabolism | Lignin - metabolism | Plants, Genetically Modified | Membrane Proteins - metabolism | Transgenes | Acyl Coenzyme A - metabolism | Arabidopsis Proteins - genetics | Hydroxylation | Hydroxybenzoates - metabolism | Membrane Proteins - genetics | Tobacco - metabolism | Arabidopsis - metabolism | Protein Interaction Mapping | Arabidopsis - genetics | Plant Leaves - genetics | Plant Leaves - metabolism | Tobacco - genetics | Cytochrome P-450 Enzyme System - genetics | Phytochemistry | Physiological aspects | Biosynthesis | Research | Protein-protein interactions | Membrane proteins | Life Sciences | Molecular biology | Cellular Biology | Biochemistry, Molecular Biology
Journal Article
Methods (San Diego, Calif.), ISSN 1046-2023, 2017, Volume 115, pp. 80 - 90
[Display omitted] •TrackMate is a software tool for automated, and semi-automated particle tracking.•TrackMate’s major development focus is on usability and... 
Phototoxicity | Open-source software | Image analysis | Single-particle tracking | Microscopy | Clathin-mediated endocytosis | SYSTEM | CLATHRIN-MEDIATED ENDOCYTOSIS | TPLATE | BIOCHEMISTRY & MOLECULAR BIOLOGY | BIOCHEMICAL RESEARCH METHODS | TRANSPORT | DYNAMICS | ARABIDOPSIS | CELL | EMBRYOGENESIS | Image Processing, Computer-Assisted - statistics & numerical data | Plant Cells - metabolism | Adaptor Proteins, Vesicular Transport - genetics | Cell Tracking - methods | Embryo, Nonmammalian - metabolism | Arabidopsis - ultrastructure | Clathrin - genetics | Adaptor Proteins, Vesicular Transport - metabolism | Fibroblasts - ultrastructure | Cell Tracking - statistics & numerical data | Clathrin - metabolism | Arabidopsis - metabolism | Caenorhabditis elegans | Endocytosis | Algorithms | Animals | Light Signal Transduction | Single-Cell Analysis - statistics & numerical data | Single-Cell Analysis - methods | Embryo, Nonmammalian - ultrastructure | Plant Cells - ultrastructure | Gene Expression Regulation, Plant | Software | Fibroblasts - metabolism | Single-Cell Analysis/methods | Arabidopsis/metabolism | Embryo, Nonmammalian/ultrastructure | Cellular Biology | Life Sciences | Clathrin/genetics | Fibroblasts/metabolism | Cell Tracking/methods | Plant Cells/metabolism | Cell Tracking/statistics & numerical data | Arabidopsis/ultrastructure | Image Processing, Computer-Assisted/statistics & numerical data | Embryo, Nonmammalian/metabolism | Adaptor Proteins, Vesicular Transport/genetics | Clathrin/metabolism | Plant Cells/ultrastructure | Single-Cell Analysis/statistics & numerical data | Fibroblasts/ultrastructure | Adaptor Proteins, Vesicular Transport/metabolism
Journal Article
Nature (London), ISSN 1476-4687, 2013, Volume 500, Issue 7463, pp. 422 - 426
Journal Article
Proceedings of the National Academy of Sciences - PNAS, ISSN 1091-6490, 2012, Volume 109, Issue 19, pp. E1192 - E1200
... (the JAZ or DELLA family of proteins), which, at the resting state, represses cognate transcription factors involved in defense (e.g., MYCs) or growth [e.g... 
Light response | Disease resistance | Plant growth | Plant defense | Plant immunity | plant growth | TRANSCRIPTION FACTORS | ARABIDOPSIS-THALIANA | CYTOCHROME-P450 MONOOXYGENASE | PROTEIN | MULTIDISCIPLINARY SCIENCES | RECEPTOR | RESPONSES | plant defense | disease resistance | GENE | light response | REPRESSOR | plant immunity | ALPHA-AMYLASE | RICE | Arabidopsis - growth & development | Oryza - metabolism | Seedlings - genetics | Arabidopsis Proteins - metabolism | DNA-Binding Proteins - metabolism | Proteolysis - drug effects | Oryza - growth & development | Basic Helix-Loop-Helix Transcription Factors - metabolism | Oryza - genetics | Plants - genetics | RNA Interference | Gibberellins - metabolism | Plant Proteins - metabolism | Repressor Proteins - metabolism | Arabidopsis Proteins - genetics | Basic Helix-Loop-Helix Transcription Factors - genetics | Plant Development | F-Box Proteins - metabolism | Repressor Proteins - genetics | Signal Transduction - genetics | Cyclopentanes - pharmacology | Seedlings - drug effects | Transcription Factors - genetics | DNA-Binding Proteins - genetics | Reverse Transcriptase Polymerase Chain Reaction | Arabidopsis - metabolism | Arabidopsis - genetics | Transcription Factors - metabolism | Oxylipins - metabolism | Plant Proteins - genetics | Two-Hybrid System Techniques | Gene Expression Regulation, Plant - drug effects | Plants - metabolism | Signal Transduction - drug effects | Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - genetics | Oxylipins - pharmacology | Gibberellins - pharmacology | Protein Binding | Basic Helix-Loop-Helix Leucine Zipper Transcription Factors - metabolism | Cyclopentanes - metabolism | Signal Transduction - physiology | Mutation | Plant Growth Regulators - metabolism | F-Box Proteins - genetics | Plant Growth Regulators - pharmacology | Seedlings - metabolism | Biological Sciences | PNAS Plus
Journal Article
Planta, ISSN 0032-0935, 2/2012, Volume 235, Issue 2, pp. 311 - 323
Members of the peptide transporter/nitrate transporter 1 (PTR/NRT1) family in plants transport a variety of substrates like nitrate, di- and tripepetides,... 
Tonoplast | Leaves | Barley | Protoplasts | Amino acids | Nitrates | Cell membranes | Plants | Open reading frames | Generally accepted auditing standards | Life Sciences | Dipeptide | Arabidopsis | Forestry | Agriculture | Ecology | Transport | Plant Sciences | Peptide | ARABIDOPSIS-THALIANA | NITRATE | FUNCTIONAL-CHARACTERIZATION | PLASMA-MEMBRANE | BINARY VECTOR | PLANT SCIENCES | LEAF SENESCENCE | BARLEY | GENE-EXPRESSION | PLANT VACUOLES | ORGANIC NITROGEN | Pollen - metabolism | Saccharomyces cerevisiae - genetics | Open Reading Frames | Cell Membrane - genetics | Green Fluorescent Proteins - genetics | Phylogeny | RNA, Plant - metabolism | Protoplasts - cytology | Recombinant Fusion Proteins - metabolism | Arabidopsis Proteins - metabolism | Saccharomyces cerevisiae - metabolism | Oocytes - cytology | Protoplasts - metabolism | Plant Proteins - classification | Membrane Transport Proteins - genetics | Pollen - genetics | Cloning, Molecular | Gene Expression Regulation, Plant | Membrane Transport Proteins - metabolism | Cell Membrane - metabolism | Plant Proteins - metabolism | Xenopus laevis - genetics | Green Fluorescent Proteins - metabolism | Arabidopsis Proteins - genetics | Oocytes - metabolism | Arabidopsis - classification | Axenic Culture | RNA, Plant - genetics | Anion Transport Proteins - metabolism | Arabidopsis - metabolism | Arabidopsis - genetics | Microscopy, Confocal | Plant Proteins - genetics | Animals | Xenopus laevis - metabolism | Recombinant Fusion Proteins - genetics | Vacuoles - metabolism | Anion Transport Proteins - classification | Anion Transport Proteins - genetics | Intracellular Membranes - metabolism | Proteins | Amphibians | Universities and colleges
Journal Article
The Plant cell, ISSN 1532-298X, 2011, Volume 23, Issue 6, pp. 2362 - 2378
Sphingolipids are a class of structural membrane lipids involved in membrane trafficking and cell polarity. Functional analysis of the ceramide synthase family... 
Ceramides | Cell aggregates | Auxins | Lipids | Sphingolipids | Cell membranes | Plants | Fatty acids | Plant cells | Seedlings | CERAMIDE SYNTHASE | FAMILY-MEMBERS | BIOCHEMISTRY & MOLECULAR BIOLOGY | PLANT-CELLS | SACCHAROMYCES-CEREVISIAE | PLANT SCIENCES | CELL BIOLOGY | AUXIN TRANSPORT | F-SP LYCOPERSICI | FUMONISIN B-1 | LIPID RAFTS | TRANS-GOLGI NETWORK | ROOT-SYSTEM ARCHITECTURE | Oxidoreductases - antagonists & inhibitors | Sphingolipids - chemistry | Cell Polarity | Arabidopsis - physiology | Fumonisins - metabolism | Humans | Molecular Sequence Data | Recombinant Fusion Proteins - metabolism | Endosomes - metabolism | Intracellular Membranes - ultrastructure | Arabidopsis Proteins - metabolism | Isoenzymes - metabolism | Cell Membrane - metabolism | Membrane Proteins - metabolism | Amino Acid Sequence | Arabidopsis Proteins - genetics | Ceramides - metabolism | Enzyme Inhibitors - metabolism | Indoleacetic Acids - metabolism | Oxidoreductases - metabolism | Isoenzymes - genetics | Membrane Proteins - genetics | Oxidoreductases - genetics | Arabidopsis - cytology | Sphingolipids - metabolism | Ceramides - chemistry | Protein Synthesis Inhibitors - metabolism | Brefeldin A - metabolism | Arabidopsis - genetics | Secretory Pathway - physiology | Sequence Alignment | Animals | Membrane Proteins - chemistry | Recombinant Fusion Proteins - genetics | Intracellular Membranes - metabolism | Arabidopsis thaliana | Physiological aspects | Genetic aspects | Cell Membrane | Enzyme Inhibitors | Secretory Pathway | Intracellular Membranes | Brefeldin A | Recombinant Fusion Proteins | Life Sciences | Arabidopsis Proteins | Vegetal Biology | Protein Synthesis Inhibitors | Fumonisins | Isoenzymes | Arabidopsis | Membrane Proteins | Oxidoreductases | Indoleacetic Acids | Endosomes
Journal Article
Proceedings of the National Academy of Sciences - PNAS, ISSN 1091-6490, 2008, Volume 105, Issue 29, pp. 9970 - 9975
The results of genetic studies in Arabidopsis indicate that three proteins, the RNase III DICER-Like1 (DCL1... 
Proteins | Enzymes | Treaties | MicroRNA | Double stranded RNA | RNA | Small interfering RNA | Nucleotide sequences | Protein precursors | Plants | Dicer | Biogenesis | Arabidopsis | ARABIDOPSIS-THALIANA | PLANT MICRORNA BIOGENESIS | MULTIDISCIPLINARY SCIENCES | NUCLEAR EXPORT | MICROPROCESSOR COMPLEX | biogenesis | MATURATION | DICER-LIKE PROTEINS | SMALL INTERFERING RNA | GENES | microRNA | TRANS-ACTING SIRNAS | C-ELEGANS | RNA-Binding Proteins - genetics | Insecta | Baculoviridae - genetics | MicroRNAs - metabolism | RNA, Plant - metabolism | Arabidopsis Proteins - metabolism | Intercellular Signaling Peptides and Proteins - metabolism | Serrate-Jagged Proteins | Cell Cycle Proteins - genetics | Membrane Proteins - metabolism | Calcium-Binding Proteins - metabolism | Recombinant Proteins - metabolism | Cell Line | Arabidopsis Proteins - genetics | Ribonuclease III - genetics | Ribonuclease III - metabolism | RNA Processing, Post-Transcriptional | Membrane Proteins - genetics | Cell Cycle Proteins - metabolism | Intercellular Signaling Peptides and Proteins - genetics | Recombinant Proteins - genetics | RNA, Plant - genetics | Arabidopsis - metabolism | Arabidopsis - genetics | Animals | MicroRNAs - genetics | RNA-Binding Proteins - metabolism | Calcium-Binding Proteins - genetics | Physiological aspects | Genetic aspects | Biochemistry | Research | Properties | Binding proteins | Biological Sciences
Journal Article
Nature (London), ISSN 1476-4687, 2017, Volume 545, Issue 7654, pp. 311 - 316
Nutrient signalling integrates and coordinates gene expression, metabolism and growth... 
TRANSCRIPTION FACTORS | ARABIDOPSIS ROOTS | METABOLISM | GLUCOSE | MULTIDISCIPLINARY SCIENCES | TRANSIENT GENE-EXPRESSION | CALCIUM | PROTOPLASTS | STRESS | TRANSLATION | PROTEIN-KINASES | Protein Kinases - metabolism | Plant Shoots - growth & development | Phosphorylation | Protein Kinases - genetics | Arabidopsis - growth & development | Calcium - metabolism | Transcriptome | Protein Kinases - chemistry | Biomass | Cellular Reprogramming | Arabidopsis Proteins - metabolism | Plants, Genetically Modified | Gene Expression Regulation, Plant | Transcription, Genetic | Plant Roots - growth & development | Calcium Signaling | Food | Amidohydrolases - metabolism | Calcium-Binding Proteins - chemistry | Calcium-Binding Proteins - metabolism | Amino Acid Sequence | Carbon - metabolism | Arabidopsis Proteins - genetics | Nitrogen - metabolism | Plant Roots - metabolism | Calcium-Calmodulin-Dependent Protein Kinases - genetics | Oxidation-Reduction | Signal Transduction | Amidohydrolases - genetics | Arabidopsis - metabolism | Arabidopsis - genetics | Calcium-Calmodulin-Dependent Protein Kinases - chemistry | Nitrates - metabolism | Arabidopsis Proteins - chemistry | Plant Shoots - metabolism | Calcium-Calmodulin-Dependent Protein Kinases - metabolism | Calcium-Binding Proteins - genetics | Transcription factors | Calcium | Architecture | Nitrates | Lethality | Hormones | Plants | Gene expression | Metabolism | Calcium nitrate | Mutants | Calcium signalling | Leaves | Signal transduction | Molecular modelling | Nitrate | Redox reactions | Nutrients | Plasticity (developmental) | Flowers & plants | Life Sciences
Journal Article
Molecular cell, ISSN 1097-2765, 2017, Volume 67, Issue 5, pp. 837 - 852.e7
.... Architectural proteins insulate compartmental domains by reducing interaction frequencies between neighboring regions in Drosophila, but CTCF loops do not play a distinct role in this organism... 
transcription | Hi-C | TAD | loop | compartment | CTCF | insulator | epigenetics | TOPOLOGY | SYSTEM | PROMOTERS | INITIATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | ARCHITECTURE | PROVIDES | DOMAINS | GENOME | CTCF SITES | REVEALS | CELL BIOLOGY | Chromatin - metabolism | Histones - chemistry | Caenorhabditis elegans Proteins - chemistry | Humans | Caenorhabditis elegans Proteins - metabolism | Structure-Activity Relationship | Drosophila Proteins - metabolism | Drosophila melanogaster - genetics | Arabidopsis Proteins - metabolism | Drosophila melanogaster - metabolism | DNA, Plant - chemistry | Computer Simulation | Transcription, Genetic | Nucleic Acid Conformation | DNA, Plant - genetics | Chromatin - chemistry | Arabidopsis Proteins - genetics | Caenorhabditis elegans - metabolism | Chromosomal Proteins, Non-Histone - metabolism | Caenorhabditis elegans - genetics | Chromatin Assembly and Disassembly | DNA - metabolism | Drosophila Proteins - chemistry | DNA, Plant - metabolism | Arabidopsis - metabolism | Chromosomal Proteins, Non-Histone - genetics | Arabidopsis - genetics | DNA - genetics | DNA - chemistry | Animals | Histones - genetics | Arabidopsis Proteins - chemistry | Models, Biological | Protein Conformation | Drosophila Proteins - genetics | Histones - metabolism | Caenorhabditis elegans Proteins - genetics | Chromatin - genetics | Chromosomal Proteins, Non-Histone - chemistry | Arabidopsis thaliana | Chromatin | Epigenetic inheritance
Journal Article
Proceedings of the National Academy of Sciences - PNAS, ISSN 1091-6490, 2012, Volume 109, Issue 31, pp. 12817 - 12821
Journal Article
Autophagy, ISSN 1554-8635, 2014, Volume 7, Issue 9, pp. 993 - 1010
Journal Article