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1. Full Text Isolation and Characterization of Spore‐Forming Bacilli (SFB) from Shepherd's Purse (Capsella bursa‐pastoris)
by Lee, Won‐Jun and Kim, Hye‐Bin and Kim, Keun‐Sung
Journal of Food Science, ISSN 0022-1147, 03/2016, Volume 81, Issue 3, pp. M684 - M691
Shepherd's purse (Capsella bursa‐pastoris), native to Europe, is commonly consumed fresh and sometimes inadequately washed before consumption in Korea. The... 
enterotoxin | spore‐forming bacillus | shepherd's purse | SFB | Bacillus pseudomycoides | Enterotoxin | Spore-forming bacillus | Shepherd's purse | STRAINS | SPOILAGE | BACTERIA | FOOD SCIENCE & TECHNOLOGY | IDENTIFICATION | EMETIC TOXIN | HBL | spore-forming bacillus | ENZYMES | PCR | CEREUS GROUP | FOOD | Genes, Bacterial | Species Specificity | Europe | Hemolysin Proteins - genetics | Humans | Vegetables - microbiology | Spores, Bacterial | Bacillus - genetics | Drug Resistance, Microbial - genetics | Bacillus cereus - isolation & purification | Food Microbiology | Enterotoxins - genetics | Bacillus cereus - genetics | Bacillus - isolation & purification | Polymerase Chain Reaction | DNA, Bacterial - analysis | Capsella - microbiology | Republic of Korea | Cruciferae | Bacillus (Bacteria) | Health aspects | Food safety | Food contamination & poisoning | Antibiotics | Drug resistance | Consumption | Spoilage | Genes | Bacillus | Toxins | Foods | Assessments
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2. Full Text Dynamics and diversity of microbial community succession in traditional fermentation of Shanxi aged vinegar
by Nie, Zhiqiang and Zheng, Yu and Du, Hongfu and Xie, Sankuan and Wang, Min
Food Microbiology, ISSN 0740-0020, 05/2015, Volume 47, pp. 62 - 68
The traditional fermentation of Shanxi aged vinegar (SAV), a well-known traditional Chinese vinegar, generally involves the preparation of starter , starch... 
Microbial succession | Microbial diversity | Solid-state fermentation | Vinegar | Microbial community | BALSAMIC VINEGAR | FOOD SCIENCE & TECHNOLOGY | MICROBIOLOGY | ACETOBACTER-PASTEURIANUS | CHINESE VINEGAR | MATURE VINEGAR | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | ACETIC-ACID BACTERIA | TOOL | Bacteria - metabolism | Fungi - classification | Saccharomycetales - isolation & purification | Fungi - isolation & purification | Enterobacteriaceae - isolation & purification | Phylogeny | Biodiversity | Fermentation | Fungi - genetics | Microbial Consortia | Denaturing Gradient Gel Electrophoresis | Mitosporic Fungi - isolation & purification | Acetic Acid | Bacteria - isolation & purification | Bacillus - isolation & purification | Staphylococcus - isolation & purification | Bacteria - classification | Acetobacter - classification | Eurotiales - isolation & purification | Lactobacillales - isolation & purification | Actinomycetales - isolation & purification | Acetic acid | Organic acids | Biological diversity
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3. Full Text Isolation and nitrogen removal characteristics of an aerobic heterotrophic nitrifying–denitrifying bacterium, Bacillus subtilis A1
by Yang, Xin-Ping and Wang, Shi-Mei and Zhang, De-Wei and Zhou, Li-Xiang
Bioresource Technology, ISSN 0960-8524, 2011, Volume 102, Issue 2, pp. 854 - 862
Bacterium A1, isolated to enhance nitrogen removal from ammonium-rich wastewater , exhibited an amazing ability to convert ammonium to gaseous nitrogen... 
Nitrogen removal | Heterotrophic nitrification | Bacillus subtilis | Aerobic denitrification | WASTE-WATER TREATMENT | C/N | AERATION | AMMONIA | DENITRIFICATION | ENERGY & FUELS | SIMULTANEOUS NITRIFICATION | CULTURE | AGRICULTURAL ENGINEERING | CARBON SOURCE | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | SEQUENCING BATCH REACTOR | ACCUMULATION | Nitrification - physiology | Carbon - metabolism | Aerobiosis | Heterotrophic Processes - physiology | Molecular Sequence Data | Waste Disposal, Fluid | Biological Oxygen Demand Analysis | Water Purification | Bacillus subtilis - isolation & purification | Bacillus subtilis - growth & development | Quaternary Ammonium Compounds - isolation & purification | Bioreactors - microbiology | Denitrification - physiology | Nitrogen - isolation & purification | Denitrification | Analysis | Nitrification
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4. Full Text Mechanism of N6-Threonylcarbamoyladenonsine (t6A) Biosynthesis: Isolation and Characterization of the Intermediate Threonylcarbamoyl-AMP
by Lauhon, Charles T
Biochemistry, ISSN 0006-2960, 11/2012, Volume 51, Issue 44, pp. 8950 - 8963
Genetic and biochemical studies have recently implicated four proteins required in bacteria for the biosynthesis of the universal tRNA modified base... 
ESSENTIAL GENES | IN-VITRO | PROTEIN | TRANSFER RIBONUCLEIC-ACID | BACILLUS-SUBTILIS | BIOCHEMISTRY & MOLECULAR BIOLOGY | ESCHERICHIA-COLI | MODIFIED NUCLEOSIDE | TRANSFER RNA-SYNTHETASE | N-(PURIN-6-YLCARBAMOYL)THREONINE | ANTICODON LOOP | Adenosine Monophosphate - isolation & purification | Adenine - biosynthesis | Adenine - analogs & derivatives | Threonine - biosynthesis | Adenosine Monophosphate - analogs & derivatives | Substrate Specificity | Alcohol Oxidoreductases - metabolism | Threonine - isolation & purification | Adenosine Monophosphate - biosynthesis | Bacillus subtilis - enzymology | Kinetics | Threonine - analogs & derivatives | Physiological aspects | Adenosine | Genetic aspects | Research | Bacterial proteins | Pyrophosphates
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5. Full Text Biofouling and biodeterioration in materials stored at the Historical Archive of the Museum of La Plata, Argentine and at the National Archive of the Republic of Cuba
by Guiamet, Patricia and Borrego, Sofía and Lavin, Paola and Perdomo, Ivette and Saravia, Sandra Gómez de
Colloids and Surfaces B: Biointerfaces, ISSN 0927-7765, 2011, Volume 85, Issue 2, pp. 229 - 234
► Biofouling and biodeterioration of photos and maps. ► Historical Archive of the Museum of La Plata. ► National Archive of the Republic of Cuba. ► Bacteria... 
Biodeterioration | Environment | Paper | Microorganisms | Archives | GELATIN | BACTERIA | MATERIALS SCIENCE, BIOMATERIALS | FUNGI | BIOPHYSICS | CHEMISTRY, PHYSICAL | IDENTIFICATION | Aspergillus - ultrastructure | Cladosporium - isolation & purification | Streptococcus - growth & development | Air Microbiology | Fungi - ultrastructure | Fungi - isolation & purification | Serratia - ultrastructure | Colony Count, Microbial | Bacteria - growth & development | Streptococcus - ultrastructure | Bacillus - isolation & purification | Streptococcus - isolation & purification | Streptomyces - growth & development | Aspergillus - isolation & purification | Bacteria - ultrastructure | Fungi - growth & development | Bacillus - growth & development | Argentina | Microscopy, Electron, Scanning | Cladosporium - ultrastructure | Staphylococcus - growth & development | Staphylococcus - ultrastructure | Environmental Monitoring - methods | Penicillium - isolation & purification | Aspergillus - growth & development | Enterobacter - ultrastructure | Serratia - growth & development | Museums | Microbial Viability | Cuba | Streptomyces - isolation & purification | Bacteria - isolation & purification | Serratia - isolation & purification | Staphylococcus - isolation & purification | Streptomyces - ultrastructure | Biofouling | Penicillium - ultrastructure | Bacillus - ultrastructure | Cladosporium - growth & development | Enterobacter - growth & development | Enterobacter - isolation & purification | Penicillium - growth & development | Biodegradation | Repositories | Fungi | Scanning electron microscopy | Penicillium | Bacteria
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6. Full Text Raw starch-degrading alpha-amylase from Bacillus aquimaris MKSC 6.2: isolation and expression of the gene, bioinformatics and biochemical characterization of the recombinant enzyme
by Puspasari, F and Radjasa, O. K and Noer, A. S and Nurachman, Z and Syah, Y. M and van der Maarel, M and Dijkhuizen, L and Janecek, S and Natalia, D and Janeček, Š
Journal of Applied Microbiology, ISSN 1364-5072, 01/2013, Volume 114, Issue 1, pp. 108 - 120
Aims The aims were to isolate a raw starchdegrading a-amylase gene baqA from Bacillus aquimaris MKSC 6.2, and to characterize the gene product through in... 
α‐amylase | GH13 subfamily | B. aquimaris MKSC 6.2 | raw starch degrading | Raw starch degrading | α-amylase | aquimaris MKSC 6 | ESCHERICHIA-COLI | BINDING DOMAIN | MICROBIOLOGY | BARLEY ALPHA-AMYLASE-1 | FAMILY | a-amylase | CLONING | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | SEQUENCE | PURIFICATION | DEGRADATION | POTATO STARCH | STRUCTURE PREDICTION | Protein Structure, Tertiary | Recombinant Proteins - metabolism | Amino Acid Sequence | Genes, Bacterial | Open Reading Frames | Computational Biology | Starch - metabolism | Molecular Sequence Data | Bacillus - genetics | Recombinant Proteins - genetics | alpha-Amylases - metabolism | Protein Folding | alpha-Amylases - genetics | Bacillus - enzymology | Escherichia coli - genetics | Base Sequence | Escherichia coli - metabolism | Protein Interaction Domains and Motifs
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7. Full Text Discoipyrroles A–D: Isolation, Structure Determination, and Synthesis of Potent Migration Inhibitors from Bacillus hunanensis
by Hu, Youcai and Potts, Malia B and Colosimo, Dominic and Herrera-Herrera, Mireya L and Legako, Aaron G and Yousufuddin, Muhammed and White, Michael A and MacMillan, John B
Journal of the American Chemical Society, ISSN 0002-7863, 09/2013, Volume 135, Issue 36, pp. 13387 - 13392
Discoidin domain receptor 2 (DDR2) is a receptor tyrosine kinase involved in a variety of cellular response pathways, including regulation of cell growth,... 
CELL LUNG-CANCER | DISCOIDIN | COLLAGEN MATRICES | BIOSYNTHESIS | KINASE | DOMAIN RECEPTOR 2 | GENE-EXPRESSION | CHITINOPHAGA-SANCTI | ERYTHROBACTER SP | CHEMISTRY, MULTIDISCIPLINARY | DDR2 | Heterocyclic Compounds, 3-Ring - pharmacology | Stereoisomerism | Humans | Biological Products - pharmacology | Structure-Activity Relationship | Dose-Response Relationship, Drug | Discoidin Domain Receptors | Heterocyclic Compounds, 3-Ring - isolation & purification | Pyrrolidinones - pharmacology | Receptor Protein-Tyrosine Kinases - antagonists & inhibitors | Molecular Structure | Cell Survival - drug effects | Receptors, Mitogen - antagonists & inhibitors | Models, Molecular | Antineoplastic Agents, Phytogenic - chemistry | Receptors, Mitogen - metabolism | Receptor Protein-Tyrosine Kinases - metabolism | Pyrrolidinones - chemistry | Biological Products - isolation & purification | Cell Movement - drug effects | Biological Products - chemistry | Pyrrolidinones - isolation & purification | Receptor Protein-Tyrosine Kinases - genetics | Signal Transduction - drug effects | Fibroblasts - drug effects | Heterocyclic Compounds, 3-Ring - chemistry | Bacillus - chemistry | Cell Line, Tumor | Cell Proliferation - drug effects | Fibroblasts - cytology | Antineoplastic Agents, Phytogenic - pharmacology | Antineoplastic Agents, Phytogenic - isolation & purification | Drug Screening Assays, Antitumor | Receptors, Mitogen - genetics | X-ray crystallography | Care and treatment | Usage | Gene mutations | Lung cancer | Nuclear magnetic resonance spectroscopy | Research | Diagnosis
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8. Full Text Bacterial and Fungal Communities in Pu'er Tea Samples of Different Ages
by Tian, Jianqing and Zhu, Zixiang and Wu, Bing and Wang, Lin and Liu, Xingzhong
Journal of Food Science, ISSN 0022-1147, 08/2013, Volume 78, Issue 8, pp. M1249 - M1256
Pu'er is a major kind of postfermented tea and is made with a “large leaf” variety of Camellia sinensis (C. sinensis assamica), whose distribution is limited... 
aging time | Pu'er tea | microbial communities | DGGE | Aging time | Microbial communities | CELLS | QUALITY | OXIDATIVE DAMAGE | FOOD SCIENCE & TECHNOLOGY | ERH TEA | GRADIENT GEL-ELECTROPHORESIS | SAUSAGES | CHEMICAL-COMPOSITION | FERMENTATION | 16S RIBOSOMAL-RNA | Camellia sinensis - chemistry | Plant Leaves - chemistry | Alcaligenes - isolation & purification | Food Contamination - analysis | Fungi - classification | Penicillium - isolation & purification | Fungi - isolation & purification | Food Microbiology | Pseudomonas - isolation & purification | Streptomyces - isolation & purification | Bacteria - isolation & purification | Achromobacter - isolation & purification | Bacillus - isolation & purification | Staphylococcus - isolation & purification | China | Polyphenols - analysis | Aspergillus - isolation & purification | Bacteria - classification | RNA, Ribosomal, 16S - genetics | Tea - microbiology | Sporosarcina - isolation & purification | Arthrobacter - isolation & purification | Camellia sinensis - microbiology | Plant Leaves - microbiology | Tea | Contamination | Methods | Food | Testing | Mountains | Fungi | Microorganisms | Correlation | Polyphenols | Bacteria | Raw
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9. Full Text Isolation of levoglucosan-utilizing thermophilic bacteria
by Iwazaki, Shintaro and Hirai, Hirokazu and Hamaguchi, Norihisa and Yoshida, Nobuyuki
Scientific Reports, ISSN 2045-2322, 12/2018, Volume 8, Issue 1, pp. 4066 - 7
We previously developed an industrial production process for novel water-soluble indigestible polysaccharides (resistant glucan mixture, RGM). During the... 
BACILLUS-SMITHII | LIPID-METABOLISM | MULTIDISCIPLINARY SCIENCES | RATS | DIETARY-FIBERS | IMMUNE FUNCTION | 1,6-ANHYDRO-BETA-D-GLUCOPYRANOSE | Fungi | Levoglucosan | Thermophilic bacteria | Filamentous microorganisms | Polysaccharides | Microorganisms | rRNA 16S | Bacteria | Carbon | Carbon sources
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10. Full Text Isolation of the Hg(II)‐volatilizing Bacillus sp. strain DC‐B2 and its potential to remediate Hg(II)‐contaminated soils
by Chen, Jinquan and Dong, Jia and Shen, Shili and Mei, Jian and Chang, Junjun
Journal of Chemical Technology & Biotechnology, ISSN 0268-2575, 05/2019, Volume 94, Issue 5, pp. 1433 - 1440
BACKGROUND Mercury (Hg) contamination is a major global environmental problem, and its remediation using environmentally friendly biotechnologies has attracted... 
Hg removal | soil bioremediation | Hg‐resistant bacteria | Hg volatilization | Bacillus | Hg-resistant bacteria | PATHWAYS | MERCURY CONTAMINATED SITES | BACTERIA | HEAVY-METALS | ORGANIC-MATTER | PADDY SOILS | CHEMISTRY, MULTIDISCIPLINARY | ENGINEERING, CHEMICAL | REMOVAL | ENGINEERING, ENVIRONMENTAL | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | RESISTANCE | BIOREMEDIATION | Chemical industry | Herbicides | Pesticides industry | Soils | Bacteria | Bioremediation | Soil chemistry | Peptone | Agricultural pollution | Pollution control | Soil investigations | Sediment pollution | Agricultural land | Soil pollution | Contamination | Mercury compounds | Heavy metals | Chemical pollution | Soil remediation | Organic chemistry | Inoculation | Vaporizing | Remediation | Farmlands | Mercury | Culture | Mercury (metal) | Soil contamination
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11. Full Text Isolation and recovery of microbial polyhydroxyalkanoates
by Kunasundari, B and Sudesh, K
Express Polymer Letters, ISSN 1788-618X, 07/2011, Volume 5, Issue 7, pp. 620 - 634
The deleterious environmental impacts caused by plastic wastes have attracted worldwide concern. The bio-based and biodegradable polyhydroxyalkanoate (PHA)... 
Microorganism | Recovery | Biodegradable polymers | Polyhydroxyalkanoate | POLYMER SCIENCE | SCALE PRODUCTION | RECOMBINANT ESCHERICHIA-COLI | biodegradable polymers | RALSTONIA-EUTROPHA | recovery | SODIUM-HYPOCHLORITE SOLUTION | SOLVENT-EXTRACTION | ATOMIC-FORCE MICROSCOPY | SUPERCRITICAL-FLUID DISRUPTION | HIGH-PRESSURE HOMOGENIZATION | ALCALIGENES-EUTROPHUS | microorganism | polyhydroxyalkanoate | BACILLUS-FLEXUS
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12. Full Text Isolation and characterization of novel bacterial strains exhibiting ligninolytic potential
by Bandounas, L and Wierckx, N.J.P and De Winde, J.H and Ruijssenaars, H.J
BMC Biotechnology, 11, 2011, ISSN 1472-6750, 10/2011, Volume 11, Issue 1, pp. 94 - 94
Background - To expand on the range of products which can be obtained from lignocellulosic biomass, the lignin component should be utilized as feedstock for... 
BIODEGRADATION | PHANEROCHAETE-CHRYSOSPORIUM | KRAFT-LIGNIN | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | ETHANOL-PRODUCTION | AZURE-B | BACILLUS-ANTHRACIS | DEGRADATION | LACCASE | AROMATIC-COMPOUNDS | PEROXIDASES | Biodegradation, Environmental | RNA, Ribosomal, 16S - metabolism | Burkholderiaceae - enzymology | Molecular Weight | Soil Microbiology | Burkholderiaceae - isolation & purification | Burkholderiaceae - genetics | Color | Bacillus - genetics | Biomass | Sequence Analysis, DNA | Pseudomonas - isolation & purification | Lignin - metabolism | Pseudomonas - enzymology | Bacillus - isolation & purification | Bacillus - enzymology | Phenothiazines - metabolism | Bacterial Typing Techniques | Coloring Agents - metabolism | RNA, Ribosomal, 16S - genetics | Pseudomonas - genetics | Usage | Ribosomal RNA | Physiological aspects | Bacteria | Genetic aspects | Research | Nucleotide sequencing | Enzymes | Microorganisms | Microbiology | Polycyclic aromatic hydrocarbons | Manuscripts | Chemicals | Molecular weight | Depolymerization | Enrichment | Dyes | Bacillus | Bulk molding compounds | Pseudomonas
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13. Full Text Isolation, production, purification and characterization of an organic-solvent-thermostable alkalophilic cellulase from Bacillus vallismortis RG-07
by Gaur, Rajeeva and Tiwari, Soni
BMC Biotechnology, ISSN 1472-6750, 03/2015, Volume 15, Issue 1, pp. 19 - 19
Background: The rising concerns about the scarcity of fossil fuels, the emission of green house gasses and air pollution by incomplete combustion of fossil... 
16S rDNA | Solvent tolerant | Bacillus vallismortis | Thermotolerant | Heavy metal | CARBOXYMETHYLCELLULASE | DEGRADING ENZYMES | TRICHODERMA-REESEI | ETHANOL-PRODUCTION | ALKALINE | RICE HULL | ENDOGLUCANASE | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BACTERIUM | SCALE | STRAIN | Cellulase - chemistry | Bacillus - metabolism | Solvents - chemistry | Cellulase - genetics | Bacterial Proteins - chemistry | Bacterial Proteins - genetics | Enzyme Stability | Molecular Sequence Data | Bacillus - genetics | Cellulase - metabolism | Hydrocarbons - chemistry | Cellulase - isolation & purification | Bacterial Proteins - metabolism | Bacterial Proteins - isolation & purification | Physiological aspects | Enzymes | Bacillus (Bacteria) | Usage | Identification and classification | Production processes | Air pollution | Analysis | Combustion
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14. Full Text Cell thermolysis – A simple and fast approach for isolation of bacterial laccases with potential to decolorize industrial dyes
by Koschorreck, Katja and Wahrendorff, Franca and Biemann, Stefan and Jesse, Annika and Urlacher, Vlada B
Process Biochemistry, ISSN 1359-5113, 05/2017, Volume 56, pp. 171 - 176
Laccases belong to multicopper oxidases and are widespread in nature. Currently, mainly fungal laccases are applied in biotechnological processes. One reason... 
Bacterial laccase | Cell disruption | Decolorization | Cell thermolysis | Indigo carmine | Alizarin red S | POLLUTANTS | SYNTHETIC DYES | DIRECTED MUTAGENESIS | BIOCHEMISTRY & MOLECULAR BIOLOGY | ESCHERICHIA-COLI | BIOCHEMICAL-CHARACTERIZATION | ENGINEERING, CHEMICAL | REMOVAL | ENZYME | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | PURIFICATION | DEGRADATION | RECALCITRANT | Pyrolysis | Oxidases | Escherichia coli
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15. Full Text Isolation and characterization of bacteria capable of degrading poly(lactic acid) at ambient temperature
by Satti, Sadia Mehmood and Shah, Aamer Ali and Auras, Rafael and Marsh, Terence L
Polymer Degradation and Stability, ISSN 0141-3910, 10/2017, Volume 144, pp. 392 - 400
Four bacteria, sp., sp. and two strains of capable of degrading poly(lactic acid), PLA, at mesophillic temperatures (∼30 °C) were isolated. Their growth and... 
Biofilm | Mesophillic temperature | Composting | Poly(lactide) | Bacterial degradation | BIODEGRADATION | POLYMER SCIENCE | PLA | INERT SOLID MEDIUM | POLYLACTIC ACID | PSEUDOMONAS-AERUGINOSA | LACTATE | DEGRADATION | SOIL | SP-NOV | BIOFILM FORMATION | Biodegradation | Bacteria | Ecosystem components | Lactic acid
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