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Frontiers in Genetics, ISSN 1664-8021, 09/2019, Volume 10
In recent years, the advent of NGS technology has made genome sequencing much cheaper than in the past; the high parallelization capability and the possibility... 
symbiont | deconvolution | binning | NGS | machine learning
Journal Article
PeerJ, ISSN 2167-8359, 2015, Volume 2015, Issue 10
Advances in high-throughput sequencing and 'omics technologies are revolutionizing studies of naturally occurring microbial communities. Comprehensive... 
Metagenomics | Visualization | Metatranscriptomics | Genome binning | Assembly | SNP profiling | READ ALIGNMENT | BACTERIA | RARE | RAST SERVER | MULTIDISCIPLINARY SCIENCES | METAGENOMIC ANALYSIS | SINGLE-CELL | GENOMES | COMMUNITY RESPONSE | DEEP-SEA | SEQUENCING DATA
Journal Article
Molecular Phylogenetics and Evolution, ISSN 1055-7903, 02/2018, Volume 119, pp. 128 - 143
[Display omitted] •Hyloidea includes >50% of all frog species, but hyloid phylogeny is poorly resolved.•We obtained data from 2214 nuclear UCE loci from 18 of... 
Anura | Amphibia | Biogeography | Naive binning | Statistical binning | Phylogenomics | DIVERSIFICATION | GLOBAL PATTERNS | BIOCHEMISTRY & MOLECULAR BIOLOGY | ULTRACONSERVED ELEMENTS | SPECIES TREES | INFERENCE | DISPERSAL | EVOLUTIONARY BIOLOGY | EVOLUTION | ANALYSES REVEAL | ALIGNMENT | GENES | GENETICS & HEREDITY | Frogs | Family | Phylogeny | Amphibians | Methods
Journal Article
Journal of the American Statistical Association, ISSN 0162-1459, 10/2015, Volume 110, Issue 512, pp. 1753 - 1769
Exploratory data analysis plays a central role in applied statistics and econometrics. In the popular regression-discontinuity (RD) design, the use of... 
Binning | Partitioning | RD plots | Tuning parameter selection | STATISTICS & PROBABILITY | ASYMPTOTIC NORMALITY | INFERENCE | CONVERGENCE-RATES | DESIGNS | LIFE
Journal Article
Medical Physics, ISSN 0094-2405, 04/2017, Volume 44, Issue 4, pp. 1359 - 1368
Journal Article
PeerJ, ISSN 2167-8359, 2015, Volume 2015, Issue 8, p. e1165
Grouping large genomic fragments assembled from shotgun metagenomic sequences to deconvolute complex microbial communities, or metagenome binning, enables the... 
MetaBAT | Metagenome binning | FRAGMENTS | SEQUENCES | RICHNESS | COVERAGE | BIAS | MULTIDISCIPLINARY SCIENCES | METAGENOMES | CLASSIFICATION | Genomes | Public software | Animal behavior | Genomics | Automation | Algorithms | Computer applications | Probability | Biology | Bioinformatics | Computer programs | BASIC BIOLOGICAL SCIENCES
Journal Article
Frontiers in Microbiology, ISSN 1664-302X, 2012, Volume 3, p. 410
So far, microbial physiology has dedicated itself mainly to pure cultures. In nature, cross feeding and competition are important aspects of microbial... 
Metagenomics | Binning | Interpolated Markov models | Tetranucleotide frequencies | Interpolated Markov Models | enrichment culture
Journal Article
IEEE transactions on medical imaging, ISSN 0278-0062, 8/2017, Volume 36, Issue 8, pp. 1626 - 1635
Cardiac SPECT images are known to suffer from both cardiac and respiratory motion blur. In this work, we investigate a 4D reconstruction approach to suppress... 
cardiac gating | Cardiac SPECT | respiratory binning | 4D reconstruction
Journal Article
Journal Article
Biology Direct, ISSN 1745-6150, 04/2018, Volume 13, Issue 1, pp. 1 - 17
Background: There are numerous computational tools for taxonomic or functional analysis of microbiome samples, optimized to run on hundreds of millions of... 
Functional binning | Algorithms | Long reads | Software | Nanopore | Taxonomic binning | Sequence analysis | PacBio | Microbiome | SEQUENCES | CLASSIFICATION | ENCYCLOPEDIA | DATABASE | GENOMES | GENES | BIOLOGY | Biological research | Research | Nucleotide sequencing | Molecular systematics | Methods | Computational biology | DNA sequencing | Biology, Experimental
Journal Article
Sensors (Switzerland), ISSN 1424-8220, 06/2015, Volume 15, Issue 7, pp. 14917 - 14931
This paper presents an image enhancement algorithm for low-light scenes in an environment with insufficient illumination. Simple amplification of intensity... 
Pixel binning | Anti-saturation | Image enhancement | ELECTROCHEMISTRY | CHEMISTRY, ANALYTICAL | INSTRUMENTS & INSTRUMENTATION | pixel binning | image enhancement | NOISE-REDUCTION | anti-saturation
Journal Article
Frontiers in Microbiology, ISSN 1664-302X, 2016, Volume 7, Issue MAY, p. 783
The role of the microbiome in health and disease is attracting great attention, yet we still know little about some of the most prevalent microorganisms inside... 
Metagenomics | Binning | Genome assembly | Butyricicoccus | Microbiome | Esters | Genomics
Journal Article