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1. Full Text Genomic Changes in Resynthesized Brassica napus and Their Effect on Gene Expression and Phenotype
by Robert T. Gaeta and J. Chris Pires and Federico Iniguez-Luy and Enrique Leon and Thomas C. Osborn
The Plant Cell, ISSN 1040-4651, 11/2007, Volume 19, Issue 11, pp. 3403 - 3417
Many previous studies have provided evidence for genome changes in polyploids, but there are little data on the overall population dynamics of genome change... 
Allopolyploidy | Polyploidy | Complementary DNA | Genetic variation | DNA | Linkage groups | Genomics | Genomes | Data lines | Methylation | ARABIDOPSIS POLYPLOIDS | BIOCHEMISTRY & MOLECULAR BIOLOGY | ALLOPOLYPLOIDS | REARRANGEMENTS | CONCERTED EVOLUTION | PLANT SCIENCES | CELL BIOLOGY | QUANTITATIVE TRAIT LOCI | HOMEOLOGOUS RECOMBINATION | FLOWERING PLANTS | OILSEED RAPE | NICOTIANA | CYTOSINE METHYLATION | Chromosome Segregation | Brassica napus - genetics | Genome, Plant - genetics | RNA, Messenger - genetics | Genetic Markers | Phylogeny | Chromosomes, Plant - metabolism | DNA, Plant - metabolism | RNA, Messenger - metabolism | DNA Transposable Elements | Polymorphism, Single-Stranded Conformational | DNA Methylation | Phenotype | Gene Expression Regulation, Plant | Recombination, Genetic - genetics | DNA, Complementary - metabolism | Amplified Fragment Length Polymorphism Analysis | Genetic Linkage | Evaluation | Brassica | Gene mutations | Genetic aspects | Gene expression | Observations
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2. Full Text The first meiosis of resynthesized Brassica napus , a genome blender
by E. Szadkowski and F. Eber and V. Huteau and M. Lodé and C. Huneau and H. Belcram and O. Coriton and M. J. Manzanares-Dauleux and R. Delourme and G. J. King and B. Chalhoub and E. Jenczewski and A-M. Chèvre
The New Phytologist, ISSN 0028-646X, 4/2010, Volume 186, Issue 1, pp. 102 - 112
Polyploidy promotes the restructuring of merged genomes within initial generations of resynthesized Brassica napus, possibly caused by homoeologous... 
Gametes | Polyploidy | Genomics | Plant genetics | Evolutionary genetics | Meiosis | Genomes | Oilseeds | Chromosomes | Cytoplasm | Brassica napus | meiosis | polyploidy | synthetic hybrids | oilseed rape | homoeologous recombination | Synthetic hybrids | Homoeologous recombination | Brassica napus (oilseed rape) | POPULATIONS | MAJOR ROLE | REARRANGEMENTS | PLANT SCIENCES | CHROMOSOME EVOLUTION | HOMEOLOGOUS RECOMBINATION | GENE-EXPRESSION | OILSEED RAPE | POLYPLOIDS | OLERACEA | HAPLOIDS | Pollen - cytology | Brassica napus - genetics | Genome, Plant - genetics | Chromosome Pairing - genetics | Monosomy - genetics | Meiosis - genetics | Trisomy - genetics | Metaphase - genetics | Brassica napus - cytology | Pollen - genetics | Alleles | Recombination, Genetic - genetics | Gene Rearrangement - genetics | Chromosomes, Plant - genetics | Chromosome Breakage | Crosses, Genetic | Genetic Linkage | Population Dynamics | Evolutionary biology | Genetic research | Evolution | Plants | Trisomy | Genome, Plant | Chromosomes, Plant | Life Sciences | Plant breeding | Recombination, Genetic | Metaphase | Gene Rearrangement | Pollen | Vegetal Biology | Chromosome Pairing | Monosomy
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3. Full Text Homoeologous shuffling and chromosome compensation maintain genome balance in resynthesized allopolyploid Brassica napus
by Zhiyong Xiong and Robert T. Gaeta and J. Chris Pires and Susan R. Wessler
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 5/2011, Volume 108, Issue 19, pp. 7908 - 7913
Polyploidy has contributed to the evolution of eukaryotes, particularly flowering plants. The genomic consequences of polyploidy have been extensively studied,... 
Allopolyploidy | Polyploidy | Genomics | Ploidies | Aneuploidy | Evolutionary genetics | Genomes | Pollen | Plants | Chromosomes | RECOMBINATION | ARABIDOPSIS-THALIANA | QUANTITATIVE TRAITS | EVOLUTION | SPECIATION | MULTIDISCIPLINARY SCIENCES | GENE-EXPRESSION | POLYPLOID PLANTS | REARRANGEMENTS | IDENTIFICATION | HYBRIDS | DNA Shuffling | Brassica napus - genetics | In Situ Hybridization, Fluorescence | Genome, Plant | RNA, Ribosomal - genetics | RNA, Ribosomal, 5S - genetics | Dosage Compensation, Genetic | Base Sequence | Gene Rearrangement | Karyotyping | Cytogenetic Analysis | Chromosomes, Plant - genetics | Chromosomal Instability | DNA, Plant - genetics | DNA, Ribosomal - genetics | Physiological aspects | Evolution | Brassica | Research | Plant genetics | Biological Sciences
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4. Full Text Associative transcriptomics of traits in the polyploid crop species Brassica napus
by Harper, Andrea L and Trick, Martin and Higgins, Janet and Fraser, Fiona and Clissold, Leah and Wells, Rachel and Hattori, Chie and Werner, Peter and Bancroft, Ian
Nature Biotechnology, ISSN 1087-0156, 08/2012, Volume 30, Issue 8, pp. 798 - 802
Association genetics can quickly and efficiently delineate regions of the genome that control traits and provide markers to accelerate breeding by... 
ARABIDOPSIS-THALIANA | GENE | SEGMENTS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | SEQUENCE | ARCHITECTURE | OILSEED RAPE | PATTERNS | OLERACEA | GENOME-WIDE ASSOCIATION | REVEALS | Plant Proteins - genetics | Polyploidy | Brassica napus - genetics | Genetic Markers - genetics | Transcriptome | Gene Expression Profiling - methods | Transcription Factors - genetics | Genome-Wide Association Study - methods | Genomics - methods | Quantitative Trait Loci | RNA | Physiological aspects | Rape (Plant) | Genetic aspects | Research | Single nucleotide polymorphisms | Gene expression | Biomarkers | Genomes | Genomics
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5. Full Text The Brassica napus blackleg resistance gene LepR3 encodes a receptor-like protein triggered by the Leptosphaeria maculans effector AVRLM1
by N. J. Larkan and D. J. Lydiate and I. A. P. Parkin and M. N. Nelson and D. J. Epp and W. A. Cowling and S. R. Rimmer and M. H. Borhan
New Phytologist, ISSN 0028-646X, 1/2013, Volume 197, Issue 2, pp. 595 - 605
, found in the cv ‘Surpass 400’, provides race-specific resistance to the fungal pathogen , which was overcome after great devastation in Australia in 2004. We... 
Full papers | Disease resistance | Plant diseases | Scabs | Genes | Medical genetics | Alleles | Genetic loci | Genomes | Plants | Chromosomes | blackleg resistance | rassica napus | rassica rapa | canola/oilseed rape | eptosphaeria maculans | receptor‐like protein | collinearity | rabidopsis thaliana | Arabidopsis thaliana | Brassica rapa | Leptosphaeria maculans | Receptor-like protein | Blackleg resistance | Brassica napus (canola/oilseed rape) | Collinearity | ARABIDOPSIS-THALIANA | AVIRULENCE GENES | DEFENSE RESPONSES | receptor-like protein | PLANT-DISEASE RESISTANCE | CLADOSPORIUM-FULVUM | PLANT SCIENCES | AGROBACTERIUM-TUMEFACIENS | IMMUNE-SYSTEM | MAP-BASED CLONING | OILSEED RAPE | POLYGENIC RESISTANCE | Genes, Plant | Virulence | Genetic Loci - genetics | Brassica napus - immunology | Plant Diseases - microbiology | RNA, Messenger - metabolism | Ascomycota - pathogenicity | Plants, Genetically Modified | Gene Expression Regulation, Plant | Plant Diseases - genetics | Membrane Proteins - metabolism | Plant Proteins - metabolism | Brassica napus - microbiology | Disease Resistance - genetics | Transformation, Genetic | Brassica napus - genetics | Synteny - genetics | Ascomycota - physiology | Genetic Association Studies | Membrane Proteins - genetics | RNA, Messenger - genetics | Chromosome Mapping | Genetic Markers | Plant Proteins - genetics | Phenotype | Chromosomes, Plant - genetics | Fungal Proteins - metabolism | Drug resistance in microorganisms
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6. Full Text CRISPR-Cas9 targeted mutagenesis leads to simultaneous modification of different homoeologous gene copies in polyploid oilseed rape (Brassica napus)
by Braatz, Janina and Harloff, Hans-Joachim and Mascher, Martin and Stein, Nils and Himmelbach, Axel and Jung, Christian
Plant Physiology, ISSN 0032-0889, 06/2017, Volume 174, Issue 2, pp. 935 - 942
In polyploid species, altering a trait by random mutagenesis is highly inefficient due to gene redundancy. We have stably transformed tetraploid oilseed rape... 
RNA-GUIDED CAS9 | SPECIFICITY | BARLEY | PLANTS | MUTATIONS | ARABIDOPSIS | PLANT SCIENCES | Transformation, Genetic | Gene Targeting | Polyploidy | Brassica napus - genetics | Seeds - genetics | Gene Dosage | Genome, Plant | Mutation - genetics | CRISPR-Cas Systems - genetics | Sequence Homology, Nucleic Acid | Mutagenesis, Insertional - genetics | DNA, Bacterial - genetics | Base Sequence | Inheritance Patterns - genetics | Brassica napus - growth & development | Botanical research | Rape (Plant) | Physiological aspects | Plant mutation | Genetic aspects | Research | Nucleotide sequencing | Methods | DNA sequencing
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7. Full Text High-density SNP-based genetic map development and linkage disequilibrium assessment in Brassica napus L
by Delourme, Régine and Falentin, Cyril and Fomeju, Berline F and Boillot, Marie and Lassalle, Gilles and André, Isabelle and Duarte, Jorge and Gauthier, Valérie and Lucante, Nicole and Marty, Amandine and Pauchon, Maryline and Pichon, Jean-Philippe and Ribière, Nicolas and Trotoux, Gwenn and Blanchard, Philippe and Rivière, Nathalie and Martinant, Jean-Pierre and Pauquet, Jérôme
BMC Genomics, ISSN 1471-2164, 02/2013, Volume 14, Issue 1, pp. 120 - 120
Background: High density genetic maps built with SNP markers that are polymorphic in various genetic backgrounds are very useful for studying the genetics of... 
POLYMORPHISM MARKERS | QUANTITATIVE TRAIT LOCI | ARABIDOPSIS-THALIANA | QTL ANALYSIS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | OIL CONTENT | GENETICS & HEREDITY | OILSEED RAPE | POPULATION-STRUCTURE | FLOWERING TIME | COMPLEX TRAITS | GENOME-WIDE ASSOCIATION | Brassica napus - genetics | Polymorphism, Single Nucleotide - genetics | Chromosome Mapping | Genome, Plant | Genetic Linkage | Linkage Disequilibrium | Quantitative Trait Loci - genetics | Chromosome mapping | Plant genetics | Rape (Plant) | Genetic aspects | Genomes | Research | Nucleotide sequencing | Identification and classification | DNA sequencing | Studies | Genetic diversity | Seeds | Genomics | Polymerase chain reaction | Genotyping | Nucleotide sequence | Breeding | Linkage disequilibrium | Development | Evolution | Single-nucleotide polymorphism | Gene mapping | Life Sciences | Agricultural sciences | Vegetal Biology
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8. Full Text Unraveling the Complex Trait of Crop Yield With Quantitative Trait Loci Mapping in Brassica napus
by Shi, Jiaqin and Li, Ruiyuan and Qiu, Dan and Jiang, Congcong and Long, Yan and Morgan, Colin and Bancroft, Ian and Zhao, Jianyi and Meng, Jinling
Genetics, ISSN 0016-6731, 07/2009, Volume 182, Issue 3, pp. 851 - 861
Yield is the most important and complex trait for the genetic improvement of crops. Although much research into the genetic basis of yield and yield-associated... 
FLOWERING-TIME | SATIVA | GREEN-REVOLUTION | TRANSGRESSIVE VARIATION | RICE ORYZA-RUFIPOGON | CANDIDATE GENES | GENETICS & HEREDITY | QTL | GRAIN-YIELD | DOMESTICATION | DISEASE RESISTANCE | Brassica napus - genetics | Genome, Plant - genetics | Seeds - genetics | Genotype | Gene Expression Profiling | Biomass | Flowers - growth & development | Phenotype | Seeds - growth & development | Time Factors | Gene Expression Regulation, Developmental | Genes, Plant - genetics | Chromosome Mapping - methods | Genetic Markers - genetics | Gene Expression Regulation, Plant | Chromosomes, Plant - genetics | Flowers - genetics | Brassica napus - growth & development | Crosses, Genetic | Quantitative Trait Loci - genetics | Quantitative genetics | Measurement | Quantitative trait loci | Crop yields | Chromosome mapping | Rape (Plant) | Genetic aspects | Research | Methods | Confidence intervals | Seeds | Winter | Genomics | Research methodology | Genetics | Population | Environmental conditions | Investigations
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9. Full Text Patterns of molecular variation in a species-wide germplasm set of Brassica napus
by Bus, Anja and Körber, Niklas and Snowdon, Rod J and Stich, Benjamin
Theoretical and Applied Genetics, ISSN 0040-5752, 12/2011, Volume 123, Issue 8, pp. 1413 - 1423
Rapeseed (Brassica napus L.) is the leading European oilseed crop serving as source for edible oil and renewable energy. The objectives of our study were to... 
Life Sciences | Biochemistry, general | Biotechnology | Plant Biochemistry | Plant Breeding/Biotechnology | Agriculture | Plant Genetics & Genomics | AGRONOMY | INTROGRESSION | PLANT SCIENCES | GENETIC DIVERSITY | HORTICULTURE | LINKAGE DISEQUILIBRIUM | SSR | POLYMORPHISMS | RAPESEED CULTIVARS | GENETICS & HEREDITY | IMPROVEMENT | POPULATION-STRUCTURE | ASSOCIATION | Genetic Variation | Gene Frequency - genetics | Brassica napus - genetics | Species Specificity | Seeds - genetics | Alleles | Genetic Loci - genetics | Linkage Disequilibrium - genetics | Genotype | Principal Component Analysis | Microsatellite Repeats - genetics | Rape (Plant) | Genetic research | Botanical research | Genetic aspects | Research | Genetic variation
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10. Full Text Genome-wide delineation of natural variation for pod shatter resistance in Brassica napus
by Raman, Harsh and Raman, Rosy and Kilian, Andrzej and Detering, Frank and Carling, Jason and Coombes, Neil and Diffey, Simon and Kadkol, Gururaj and Edwards, David and McCully, Margaret and Ruperao, Pradeep and Parkin, Isobel A. P and Batley, Jacqueline and Luckett, David J and Wratten, Neil
PLoS ONE, ISSN 1932-6203, 07/2014, Volume 9, Issue 7, p. e101673
Resistance to pod shattering (shatter resistance) is a target trait for global rapeseed (canola, Brassica napus L.), improvement programs to minimise grain... 
LINKAGE MAP | QUANTITATIVE TRAIT LOCI | SILIQUA STRENGTH | GENE | SNP DISCOVERY | CELL-SEPARATION | MULTIDISCIPLINARY SCIENCES | SEED DISPERSAL | QTL | OILSEED RAPE | ARABIDOPSIS | Brassica napus - genetics | Genetic Association Studies | Seeds - physiology | Genes, Plant | Seeds - genetics | Chromosome Mapping | Polymorphism, Single Nucleotide | Brassica napus - anatomy & histology | Genetic Markers | Quantitative Trait Loci | Brassica napus - physiology | Seeds - anatomy & histology | Arabidopsis thaliana | Quantitative genetics | Chromosomes | Analysis | Genomics | Seeds | Grain | Genes | Plant biology | Valves | Genomes | Fragmentation | Genotype & phenotype | Germplasm | Genetics | Agriculture | Genotypes | Food | Rice | Rape plants | Domestication | Corn | Sorghum | Genetic diversity | Standing crop | Loci | Quantitative trait loci | Brassica | Genotyping | Rapeseed | Variation
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11. Full Text Single nucleotide polymorphism (SNP) discovery in the polyploid Brassica napus using Solexa transcriptome sequencing
by Trick, Martin and Long, Yan and Meng, Jinling and Bancroft, Ian
Plant Biotechnology Journal, ISSN 1467-7644, 05/2009, Volume 7, Issue 4, pp. 334 - 346
Oilseed rape (Brassica napus) was selected as an example of a polyploid crop, and the Solexa sequencing system was used to generate approximately 20 million... 
Brassica | Marker | Sequence | Single nucleotide polymorphism | Next generation sequencing | Solexa | ARABIDOPSIS-THALIANA | single nucleotide polymorphism | next generation sequencing | REGION | PLANT SCIENCES | sequence | GENE | COMPARATIVE GENOMICS | SEGMENTS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | marker | OILSEED RAPE | MAIZE | OLERACEA | Polyploidy | Brassica napus - genetics | Computational Biology | Chromosome Mapping | Gene Expression Profiling | Genome, Plant | RNA, Plant - genetics | Sequence Alignment | Plant Leaves - genetics | Alleles | Polymorphism, Single Nucleotide | Software | Sequence Analysis, DNA - methods | Expressed Sequence Tags | Genetics | Genetic aspects
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12. Full Text A genome-wide association study of plant height and primary branch number in rapeseed (Brassica napus)
by Li, Lixia and Li, Feng and Li, Jun and Li, Hao and Chen, Biyun and Xu, Kun and Gao, Guizhen and Yan, Guixin and Qiao, Jiangwei and Xiao, Xin and Zhang, Tianyao and Nishio, Takeshi and Wu, Xiaoming
Plant Science, ISSN 0168-9452, 01/2016, Volume 242, pp. 169 - 177
Crop plant architecture plays a highly important role in its agronomic performance. Plant height (PH) and primary branch number (PB) are two major factors that... 
Primary branch number | Brassica napus | Association mapping | Plant architecture | SNP | Plant height | ARABIDOPSIS-THALIANA | GREEN-REVOLUTION | BIOCHEMISTRY & MOLECULAR BIOLOGY | GENETIC ARCHITECTURE | PLANT SCIENCES | QUANTITATIVE TRAIT LOCI | YIELD-RELATED TRAITS | OILSEED RAPE | AGRONOMIC TRAITS | MOLECULAR-CLONING | COMPLEX TRAITS | FLOWERING TIME | Brassica napus - genetics | Genome, Plant - genetics | Arabidopsis - growth & development | Genetic Association Studies - methods | Chromosome Mapping | Arabidopsis - metabolism | Linkage Disequilibrium | Arabidopsis - genetics | Algorithms | Genes, Plant - genetics | Brassica napus - classification | Models, Genetic | Polymorphism, Single Nucleotide | Chromosomes, Plant - genetics | Brassica napus - growth & development | Quantitative Trait Loci - genetics | Genetic research | Genomes | Single nucleotide polymorphisms | Genomics | Plant genetics | Arabidopsis thaliana | Quantitative genetics | Analysis | Genes
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