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Molecular Systems Biology, ISSN 1744-4292, 2011, Volume 7, Issue 1, pp. 465 - n/a
.... In this study, we design and experimentally demonstrate three transcriptional oscillators in vitro... 
oscillation | synthetic biology | cell free | in vitro | transcriptional circuits | SYSTEM | NETWORK | DESIGN | BIOCHEMISTRY & MOLECULAR BIOLOGY | PRINCIPLES | PREDATOR | ROBUST | RHYTHMS | MODELS | CELL-CYCLE OSCILLATOR | FEEDBACK | Electrophoresis, Polyacrylamide Gel | Ribonuclease H - physiology | Escherichia coli Proteins - physiology | Gene Regulatory Networks | DNA-Directed DNA Polymerase - genetics | Systems Biology - methods | Feedback, Physiological | Metabolic Networks and Pathways | Synthetic Biology - methods | Escherichia coli Proteins - genetics | DNA-Directed DNA Polymerase - physiology | Transcription, Genetic | Models, Genetic | Ribonuclease H - genetics | Networks | Amplitudes | Transcription | Circuits | p53 Protein | Oscillations | Ribonuclease H | Regulatory sequences | Biochemistry | Biology | Hybridization | DNA-directed RNA polymerase | Modularity | Information systems | Design | Degradation | Engineering | Negative feedback | Robustness (mathematics) | E coli | Feedback | Bacteria | Qualitative analysis | Synthetic biology | Mathematical models | Deoxyribonucleic acid--DNA | RNA phages | Biodegradation | Enzymes | Construction | MDM2 protein | Degradation products | Nucleotide sequence | Interference | Analog circuits | Chemical reactions | Computer engineering | Ribonucleic acid--RNA | Oscillators | Molecular chains | Waste management | Amplification | Organic chemistry | Inhibitors | Asymmetry | Titration | In vivo methods and tests | Control theory
Journal Article
Journal Article
Physical review. A, Atomic, molecular, and optical physics, ISSN 1094-1622, 2013, Volume 88, Issue 6
A degenerate optical parametric oscillator network is proposed to solve the NP-hard problem of finding a ground state of the Ising model... 
OPTICS | QUANTUM | FLUCTUATIONS | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | Physics - Quantum Physics
Journal Article
Scientific reports, ISSN 2045-2322, 11/2015, Volume 5, Issue 1, p. 16994
.... In spatially ordered ensembles of candle flame oscillators the fluctuations in the ratio of oxygen atoms with respect to that of carbon, hydrogen and nitrogen produces an oscillation in the visible... 
SYNCHRONIZATION | MOTION | KURAMOTO-SIVASHINSKY-EQUATION | MULTIDISCIPLINARY SCIENCES | ORDERED STATES | FLAME | CHAOTIC DYNAMICS | Oxygen | Oscillators | Physics - Chemical Physics
Journal Article
The Journal of chemical physics, ISSN 1089-7690, 2018, Volume 149, Issue 4, p. 045101
Biochemical oscillations are ubiquitous in living organisms. In an autonomous system, not influenced by an external signal, they can only occur out of... 
SYSTEM | CHEMICAL-REACTIONS | RESONANCE | FLUCTUATIONS | KINETICS | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | DYNAMICS | CHEMISTRY, PHYSICAL | NOISE | BRUSSELATOR | KAIC PHOSPHORYLATION | CYCLE | Organic chemistry | Oscillations | Qualitative analysis | Biochemistry | Diffusion coefficient | Phase transitions | Oscillators | Species diffusion
Journal Article
The journal of physical chemistry. B, ISSN 1520-6106, 03/2017, Volume 121, Issue 10, pp. 2331 - 2338
Journal Article
Proceedings of the National Academy of Sciences - PNAS, ISSN 1091-6490, 2002, Volume 99, Issue 9, pp. 5988 - 5992
.... We show that this type of oscillator is driven mainly by two elements: the concentration of a repressor protein and the dynamics of an activator protein forming an inactive complex with the repressor... 
Molecules | Biological Sciences | Determinism | Messenger RNA | Oscillation | Chemical reactions | Trajectories | Biochemistry | Stochastic models | Physics | Oscillators | RHYTHMS | CIRCADIAN CLOCKS | MULTIDISCIPLINARY SCIENCES | Promoter Regions, Genetic | Algorithms | Time Factors | Protein Binding | Transcription, Genetic | Models, Genetic | Models, Statistical | Circadian Rhythm | RNA, Messenger - metabolism | Circadian rhythms | Physiological aspects | Genetic aspects | Research | Biological control systems
Journal Article
Chemical engineering journal (Lausanne, Switzerland : 1996), ISSN 1385-8947, 2009, Volume 155, Issue 3, pp. 789 - 799
A no-moving-part microfluidic oscillator was developed for mixing two reactants prior to their admission into a microreactor... 
Micromixer | Oscillator | Mixer | Fluidics | ENGINEERING, CHEMICAL | VALVE | FLOW | Analysis | Microfluidics
Journal Article
Scientific reports, ISSN 2045-2322, 2017, Volume 7, Issue 1, pp. 7936 - 7
We report the occurrence of an explosive death transition for the first time in an ensemble of identical limit cycle and chaotic oscillators coupled via mean-field diffusion... 
CHEMICAL OSCILLATORS | STEADY-STATES | STABILITY | MULTIDISCIPLINARY SCIENCES | SYSTEMS | COUPLED NONLINEAR OSCILLATORS | AMPLITUDE DEATH | Oscillations | Death | Phase transitions | Oscillators
Journal Article
Physical chemistry chemical physics : PCCP, ISSN 1463-9076, 06/2015, Volume 17, Issue 22, pp. 14297 - 14306
.... Two widely used models, Drude oscillators and induced point-dipoles, are compared in a systematic study using their respective implementations in CHARMM and AMBER... 
FLUCTUATING CHARGE | ELECTRONIC POLARIZABILITY | MODELS | PHYSICS, ATOMIC, MOLECULAR & CHEMICAL | CHEMISTRY, PHYSICAL | FORCE-FIELD | SYSTEMS | PARTICLE MESH EWALD | MOLECULAR-DYNAMICS SIMULATIONS | IONIC LIQUIDS | POLARIZATION | WATER | Molecular dynamics | Ionic liquids | Mathematical models | Hydrogen atoms | Inclusions | Flexibility | Charge distribution | Oscillators
Journal Article
Physical chemistry chemical physics : PCCP, ISSN 1463-9076, 06/2015, Volume 17, Issue 22, pp. 14297 - 14306
.... Two widely used models, Drude oscillators and induced point-dipoles, are compared in a systematic study using their respective implementations in CHARMM and AMBER... 
Quantum Theory | Algorithms | Models, Chemical | Computer Simulation | Molecular Conformation | Oscillometry - methods | Ionic Liquids - chemistry | Molecular Dynamics Simulation
Journal Article
IEEE Transactions on Automatic Control, ISSN 0018-9286, 01/2017, Volume 62, Issue 1, pp. 372 - 378
.... A very important class of CFS consists of biological oscillators, named after Brian Goodwin and describing self-regulated chains of enzymatic reactions, where the product of each reaction catalyzes... 
Couplings | Protocols | Cyclic feedback systems (CFS) | Biological system modeling | incrementally output strictly passive (iOSP) | Genetics | Synchronization | incremental output feedback passivity (iOFP) | Oscillators | Chemicals | To be checked by Faculty | STABILITY | SYSTEMS | AUTOMATION & CONTROL SYSTEMS | ENGINEERING, ELECTRICAL & ELECTRONIC | Oscillators (Electronics) | Research | Synchronism
Journal Article
Science (American Association for the Advancement of Science), ISSN 1095-9203, 2009, Volume 323, Issue 5914, pp. 614 - 617
Journal Article