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Journal Article
Journal Article
Proceedings of the National Academy of Sciences - PNAS, ISSN 1091-6490, 09/2011, Volume 109, Issue 8, pp. 2802 - 2807
We use an integrated approach to understand breast cancer heterogeneity by modeling mRNA, copy number alterations, micro-RNAs, and methylation in a pathway context utilizing the pathway recognition... 
Datasets | T lymphocytes | Messenger RNA | BREAST CANCER SPECIAL FEATURE | Noninfiltrating intraductal carcinoma | Breast cancer | Mast cells | Macrophages | Signatures | Tumors | Cancer | Integrated molecular data | Perturbated pathway | Functional genomics | Omics | Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Prognosis | Genomics | Humans | Gene Expression Regulation, Neoplastic | Databases, Genetic | Carcinoma, Intraductal, Noninfiltrating - genetics | Gene Expression Profiling | Th2 Cells - immunology | Th1 Cells - immunology | Interleukins - metabolism | Carcinoma, Intraductal, Noninfiltrating - immunology | Female | Breast Neoplasms - classification | Reproducibility of Results | Neoplasm Invasiveness | Mammography | Signal Transduction - genetics | Breast Neoplasms - blood supply | Algorithms | Breast Neoplasms - genetics | Carcinoma, Intraductal, Noninfiltrating - pathology | Breast Neoplasms - pathology | Survival Analysis | Lymphocyte Count | Carcinoma, Intraductal, Noninfiltrating - classification | Lymphocytes, Tumor-Infiltrating - immunology | Interleukins | RNA | Physiological aspects | Carcinoma, Ductal | Development and progression | Genetic aspects | Research | Health aspects | Signal transduction | Cytokines | Lymphocytes | Gene expression | Cell adhesion & migration | Carcinoma | Helper cells | Cytotoxicity | Lymphocytes T | Extracellular matrix | Immunity (humoral) | genomics | miRNA | copy number | Integration | Invasiveness | Data processing | Stat4 protein | Inflammation | ErbB-2 protein | Survival | DNA | Methylation | Index Medicus | integrated molecular data | Biological Sciences | functional genomics | perturbated pathway | omics
Journal Article
Journal Article
Journal Article
Breast cancer research and treatment, ISSN 0167-6806, 2/2012, Volume 132, Issue 1, pp. 29 - 39
Journal Article
by Ciriello, Giovanni and Gatza, Michael L and Beck, Andrew H and Wilkerson, Matthew D and Rhie, Suhn K and Pastore, Alessandro and Zhang, Hailei and McLellan, Michael and Yau, Christina and Kandoth, Cyriac and Bowlby, Reanne and Shen, Hui and Hayat, Sikander and Fieldhouse, Robert and Lester, Susan C and Tse, Gary M.K and Factor, Rachel E and Collins, Laura C and Allison, Kimberly H and Chen, Yunn-Yi and Jensen, Kristin and Johnson, Nicole B and Oesterreich, Steffi and Mills, Gordon B and Cherniack, Andrew D and Robertson, Gordon and Benz, Christopher and Sander, Chris and Laird, Peter W and Hoadley, Katherine A and King, Tari A and Perou, Charles M and Akbani, Rehan and Auman, J. Todd and Balasundaram, Miruna and Balu, Saianand and Barr, Thomas and Beck, Andrew and Benz, Stephen and Berrios, Mario and Beroukhim, Rameen and Bodenheimer, Tom and Boice, Lori and Bootwalla, Moiz S and Bowen, Jay and Brooks, Denise and Chin, Lynda and Cho, Juok and Chudamani, Sudha and Davidsen, Tanja and Demchok, John A and Dennison, Jennifer B and Ding, Li and Felau, Ina and Ferguson, Martin L and Frazer, Scott and Gabriel, Stacey B and Gao, JianJiong and Gastier-Foster, Julie M and Gehlenborg, Nils and Gerken, Mark and Getz, Gad and Gibson, William J and Hayes, D. Neil and Heiman, David I and Holbrook, Andrea and Holt, Robert A and Hoyle, Alan P and Hu, Hai and Huang, Mei and Hutter, Carolyn M and Hwang, E. Shelley and Jefferys, Stuart R and Jones, Steven J.M and Ju, Zhenlin and Kim, Jaegil and Lai, Phillip H and Lawrence, Michael S and Leraas, Kristen M and Lichtenberg, Tara M and Lin, Pei and Ling, Shiyun and Liu, Jia and Liu, Wenbin and Lolla, Laxmi and Lu, Yiling and Ma, Yussanne and Maglinte, Dennis T and Mardis, Elaine and Marks, Jeffrey and Marra, Marco A and McAllister, Cynthia and Meng, Shaowu and Meyerson, Matthew and Moore, Richard A and Mose, Lisle E and Mungall, Andrew J and Murray, Bradley A and Naresh, Rashi and Noble, Michael S and ... and TCGA Research Network and TCGA Res Network
Cell (Cambridge), ISSN 0092-8674, 10/2015, Volume 163, Issue 2, pp. 506 - 519
Journal Article