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1. Full Text Control of Hydrogen Photoproduction by the Proton Gradient Generated by Cyclic Electron Flow in Chlamydomonas reinhardtii
by Dimitri Tolleter and Bart Ghysels and Jean Alric and Dimitris Petroutsos and Irina Tolstygina and Danuta Krawietz and Thomas Happe and Pascaline Auroy and Jean-Marc Adriano and Audrey Beyly and Stéphan Cuiné and Julie Plet and Ilja M. Reiter and Bernard Genty and Laurent Cournac and Michael Hippler and Gilles Peltier
The Plant Cell, ISSN 1040-4651, 7/2011, Volume 23, Issue 7, pp. 2619 - 2630
Hydrogen photoproduction by eukaryotic microalgae results from a connection between the photosynthetic electron transport chain and a plastidial hydrogenase.... 
Protons | Hydrogen | Fluorescence | Starches | Photoproduction | Sulfur | Photosynthesis | Chlorophylls | Hydrogen production | Plant cells | ARABIDOPSIS-THALIANA | ENERGY | BIOCHEMISTRY & MOLECULAR BIOLOGY | LIGHT | GREEN-ALGAE | IRON-DEFICIENCY | PLANT SCIENCES | CELL BIOLOGY | ATP SYNTHASE | H-2 PRODUCTION | STARCH METABOLISM | PHOTOSYSTEM-II | PHOTOSYNTHESIS | Anaerobiosis | Electron Transport - drug effects | Genetic Complementation Test | Oxygen - metabolism | Hydrogenase - metabolism | Chlamydomonas reinhardtii - genetics | Light | Plants, Genetically Modified | Photosynthesis - physiology | Proton Ionophores - pharmacology | Photosystem I Protein Complex - metabolism | Chlamydomonas reinhardtii - metabolism | Membrane Proteins - metabolism | Plant Proteins - metabolism | Electron Transport - physiology | Hydrogen - metabolism | Sulfur - metabolism | Chlamydomonas reinhardtii - cytology | Aerobiosis | Oxidation-Reduction | Membrane Proteins - genetics | Photosystem I Protein Complex - genetics | Plant Proteins - genetics | Photosynthesis - drug effects | Carbonyl Cyanide p-Trifluoromethoxyphenylhydrazone - pharmacology | Electrons | Photosystem I Protein Complex - drug effects | Physiological aspects | Research | Chlamydomonas
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2. Full Text Metabolic flux analysis of heterotrophic growth in Chlamydomonas reinhardtii
by Boyle, Nanette R and Sengupta, Neelanjan and Morgan, John A
PLoS ONE, ISSN 1932-6203, 05/2017, Volume 12, Issue 5, p. e0177292
Despite the wealth of knowledge available for C. reinhardtii, the central metabolic fluxes of growth on acetate have not yet been determined. In this study,... 
PHOTOAUTOTROPHIC METABOLISM | AMINO-ACID | C-13 | MULTIDISCIPLINARY SCIENCES | ESCHERICHIA-COLI | BALANCE ANALYSIS | MAPPING MATRICES | MICROALGA CHLORELLA PROTOTHECOIDES | NETWORKS | CARBON METABOLISM | ACETATE | Carbon - metabolism | Heterotrophic Processes - physiology | Chlamydomonas reinhardtii - growth & development | Oxaloacetic Acid - metabolism | Carbon Isotopes | Mitochondria - metabolism | Zinc Acetate - metabolism | Metabolic Flux Analysis | Coenzyme A - metabolism | Acetyl Coenzyme A - metabolism | Models, Biological | Adenosine Triphosphate - metabolism | Malates - metabolism | Cytosol - metabolism | Plastids - metabolism | Chlamydomonas reinhardtii - metabolism | Citrate (si)-Synthase - metabolism | Plant Proteins - metabolism | Fatty Acids - metabolism | Physiological aspects | Research | Metabolism | Growth | Chlamydomonas | Bioengineering | Carbon dioxide | Labelling | Biochemistry | Biomass | Dehydrogenase | ADP | T-cell receptor | Microorganisms | Drug tolerance | Physiology | Acetate kinase | Labeling | Carbon sources | Enzymes | Chlorophyll | Starvation | Cultivation | Plants | Biofuels | Environmental effects | Studies | Oil | Malate | Atmosphere | Computer applications | Butanol | Photosynthesis | Acetic acid | Assimilation | Biotechnology | Media (culture) | Seeds | Growth rate | Chemical engineering | Transportation | Genes | Amino acids | Lipids | Genomes | Leaves | Engineering | E coli | Metabolites | Network topologies | Food | Barley | Algae | Continuous culture | Corn | Nitrogen | Brackish water | Carbon
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3. Full Text A light harvesting complex-like protein in maintenance of photosynthetic components in Chlamydomonas
by Zhao, Lei and Cheng, Dongmei and Huang, Xiahe and Chen, Mei and Dall’Osto, Luca and Xing, Jiale and Gao, Liyan and Li, Lingyu and Wang, Yale and Bassi, Roberto and Peng, Lianwei and Wang, Yingchun and Rochaix, Jean-David and Huang, Fang
Plant Physiology, ISSN 0032-0889, 08/2017, Volume 174, Issue 4, pp. 2419 - 2433
Using a genetic approach, we have identified and characterized a novel protein, named Msf1 (Maintenance factor for photosystem I), that is required for the... 
CAB-LIKE PROTEINS | THYLAKOID MEMBRANES | PLANT PHOTOSYSTEM-I | SYNECHOCYSTIS-SP PCC-6803 | STRESS-PROTEINS | REINHARDTII | PSI-LHCI SUPERCOMPLEX | A/B-BINDING-PROTEINS | SP PCC 6803 | CHLOROPHYLL SYNTHESIS | PLANT SCIENCES | Amino Acid Sequence | Chlamydomonas - growth & development | Chlamydomonas - physiology | Light-Harvesting Protein Complexes - metabolism | Stress, Physiological | Biosynthetic Pathways | Chlorophyll - metabolism | Chlamydomonas - metabolism | Mutation - genetics | Genetic Complementation Test | Protein Subunits - metabolism | Thylakoids - metabolism | Photosystem II Protein Complex - metabolism | Heat-Shock Response | Plant Proteins - chemistry | Protein Binding | Photosystem I Protein Complex - metabolism | Plant Proteins - metabolism | Photosynthesis | Light-Harvesting Protein Complexes - chemistry | Genetic aspects | Gene expression | Observations | Chlamydomonas
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4. Full Text Photosynthetic trichomes contain a specific rubisco with a modified pH-dependent activity
by Laterre, Raphaëlle and Pottier, Mathieu and Remacle, Claire and Boutry, Marc
Plant Physiology, ISSN 0032-0889, 04/2017, Volume 173, Issue 4, pp. 2110 - 2120
Ribulose-1,5-biphosphate carboxylase/oxygenase (Rubisco) is the most abundant enzyme in plants and is responsible for CO2 fixation during photosynthesis. This... 
METABOLITES | TRANSPORT | PLANT TRANSFORMATION | BIOSYNTHESIS | SMALL-SUBUNIT | INCREASES | PROTEINS | GLANDULAR TRICHOMES | TOBACCO | CHLAMYDOMONAS | PLANT SCIENCES | Ribulose-Bisphosphate Carboxylase - genetics | Electrophoresis, Gel, Two-Dimensional | Trichomes - enzymology | Phylogeny | Protein Subunits - metabolism | Protein Subunits - classification | Chlamydomonas reinhardtii - genetics | Mass Spectrometry | Gene Expression Regulation, Plant | Chlamydomonas reinhardtii - metabolism | Plant Proteins - metabolism | Proteomics - methods | Protein Subunits - genetics | Trichomes - metabolism | Carbon Dioxide - metabolism | Tobacco - metabolism | Reverse Transcriptase Polymerase Chain Reaction | Ribulose-Bisphosphate Carboxylase - classification | Plant Proteins - genetics | Ribulose-Bisphosphate Carboxylase - metabolism | Plant Leaves - genetics | Plant Leaves - metabolism | Tobacco - genetics | Chlamydomonas reinhardtii - enzymology | Trichomes - genetics | Kinetics | Photosynthesis | Tobacco - enzymology | Hydrogen-Ion Concentration | Physiological aspects | Botanical research | Rubisco | Trichomes | Research | Hydrogen-ion concentration
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5. Full Text Chloroplast RNA metabolism
by Stern, David B and Goldschmidt-Clermont, Michel and Hanson, Maureen R
Annual Review of Plant Biology, ISSN 1543-5008, 06/2010, Volume 61, Issue 1, pp. 125 - 155
The chloroplast genome encodes proteins required for photosynthesis, gene expression, and other essential organellar functions. Derived from a cyanobacterial... 
Pentatricopeptide | Helical repeat proteins | RNA editing | Ribonuclease | Splicing | RNA processing | GROUP-II INTRON | ARABIDOPSIS-THALIANA | POLYNUCLEOTIDE PHOSPHORYLASE | helical repeat proteins | SUBUNIT RIBOSOMAL-RNA | pentatricopeptide | PLANT SCIENCES | IN-VITRO | MAIZE CHLOROPLASTS | CHLAMYDOMONAS-REINHARDTII | CIS-ACTING ELEMENTS | PSBL MESSENGER-RNA | PENTATRICOPEPTIDE REPEAT PROTEIN | splicing | ribonuclease | RNA, Chloroplast - metabolism | Plants - metabolism | Plants - genetics | RNA Processing, Post-Transcriptional | Plant Proteins - chemistry | RNA-Binding Proteins - chemistry | Plant Proteins - metabolism | RNA, Chloroplast - genetics | Chloroplasts - genetics | Chloroplasts - metabolism | RNA-Binding Proteins - metabolism | Amino Acid Motifs
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6. Full Text Chlorophyll metabolism
by Tanaka, Ryouichi and Tanaka, Ayumi
Current Opinion in Plant Biology, ISSN 1369-5266, 2006, Volume 9, Issue 3, pp. 248 - 255
Since the 1970s, researchers have proposed several regulatory pathways governing chlorophyll metabolism, but only recently have the underlying molecular... 
CAB-LIKE PROTEINS | ARABIDOPSIS-THALIANA | SYNECHOCYSTIS-SP PCC-6803 | TRANSFER-RNA REDUCTASE | CHLAMYDOMONAS-REINHARDTII | OXYGENASE CAO | SUBCELLULAR-LOCALIZATION | MG-PROTOPORPHYRIN-IX | TETRAPYRROLE BIOSYNTHESIS | CELL-DEATH | PLANT SCIENCES | Chlorophyll - chemistry | Plants - metabolism | Molecular Structure | Chlorophyll - metabolism | Chlorophyll - genetics | Gene Expression Regulation, Plant | Physiological aspects | Photosynthesis | Chlorophyll
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7. Full Text A Mutant in the ADH1 Gene of Chlamydomonas reinhardtii Elicits Metabolic Restructuring during Anaerobiosis
by Leonardo Magneschi and Claudia Catalanotti and Venkataramanan Subramanian and Alexandra Dubini and Wenqiang Yang and Florence Mus and Matthew C. Posewitz and Michael Seibert and Pierdomenico Perata and Arthur R. Grossman
Plant Physiology, ISSN 0032-0889, 3/2012, Volume 158, Issue 3, pp. 1293 - 1305
The green alga Chlamydomonas reinhardtii has numerous genes encoding enzymes that function in fermentative pathways. Among these, the bifunctional... 
Proteins | Enzymes | Lactates | Dehydrogenases | Cellular metabolism | Ethanol | Anaerobic conditions | Formates | Fermentation | Acetates | ENVIRONMENTAL STRESS AND ADAPTATION TO STRESS | PYRUVATE FORMATE-LYASE | OXYGEN | CARROT CELLS | HYDROGEN PHOTOPRODUCTION | ALCOHOL-DEHYDROGENASE | RESPIRATION | ESCHERICHIA-COLI | FERMENTATION | ALGA | ARABIDOPSIS | PLANT SCIENCES | Anaerobiosis | Acetyltransferases - metabolism | Genes, Plant | Acetyltransferases - genetics | Alcohol Dehydrogenase - physiology | Chlamydomonas reinhardtii - genetics | Chlamydomonas reinhardtii - physiology | Pyruvate Synthase - metabolism | Transcription, Genetic | Chlamydomonas reinhardtii - metabolism | Plant Proteins - metabolism | Hydrogen - metabolism | NAD - metabolism | Formates - metabolism | Alcohol Dehydrogenase - metabolism | Carbon Dioxide - metabolism | Ethanol - metabolism | Plant Proteins - physiology | Acetates - metabolism | Lactic Acid - metabolism | Metabolome | Acetate Kinase - metabolism | Blotting, Western | Plant Proteins - genetics | Acetate Kinase - genetics | Glycerol - metabolism | Chlamydomonas reinhardtii - enzymology | Alcohol Dehydrogenase - genetics | Plant physiology | Plant genetics | Physiological aspects | Genetic aspects | Research | Chlamydomonas
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8. Full Text Nitrogen-Sparing Mechanisms in Chlamydomonas Affect the Transcriptome, the Proteome, and Photosynthetic Metabolism
by Stefan Schmollinger and Timo Mühlhaus and Nanette R. Boyle and Ian K. Blaby and David Casero and Tabea Mettler and Jeffrey L. Moseley and Janette Kropat and Frederik Sommer and Daniela Strenkert and Dorothea Hemme and Matteo Pellegrini and Arthur R. Grossman and Mark Stitt and Michael Schroda and Sabeeha S. Merchant
The Plant Cell, ISSN 1040-4651, 4/2014, Volume 26, Issue 4, pp. 1410 - 1435
Nitrogen (N) is a key nutrient that limits global primary productivity; hence, N-use efficiency is of compelling interest in agriculture and aquaculture. We... 
Datasets | Enzymes | Messenger RNA | Genes | Ribosomes | Proteomics | Amino acids | LARGE-SCALE BIOLOGY ARTICLE | Proteomes | Plants | Plant cells | ARABIDOPSIS-THALIANA | BIOCHEMISTRY & MOLECULAR BIOLOGY | NITRATE ASSIMILATION | IRON-DEFICIENCY | TANDEM MASS-SPECTROMETRY | PLANT SCIENCES | CELL BIOLOGY | HIGHER-PLANTS | RNA-SEQ | CHLAMYDORNONAS-REINHARDTII | TRIACYLGLYCEROL ACCUMULATION | REGULATORY GENE NIT2 | NITRITE REDUCTASE | Physiological aspects | Botanical research | Nitrogen | Health aspects | Chlamydomonas | Large-Scale Biology
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9. Full Text Small RNAs reveal two target sites of the RNA-maturation factor Mbb1 in the chloroplast of Chlamydomonas
by Loizeau, Karen and Qu, Yujiao and Depp, Sébastien and Fiechter, Vincent and Ruwe, Hannes and Lefebvre-Legendre, Linnka and Schmitz-Linneweber, Christian and Goldschmidt-Clermont, Michel
Nucleic Acids Research, ISSN 0305-1048, 2014, Volume 42, Issue 5, pp. 3286 - 3297
Many chloroplast transcripts are protected against exonucleolytic degradation by RNA-binding proteins. Such interactions can lead to the accumulation of short... 
THYLAKOID MEMBRANES | REINHARDTII CHLOROPLASTS | 5' UNTRANSLATED REGION | MESSENGER-RNA | NONCODING RNAS | BIOCHEMISTRY & MOLECULAR BIOLOGY | SECONDARY STRUCTURES | GENE-EXPRESSION | SELECTABLE MARKER | PENTATRICOPEPTIDE REPEAT PROTEIN | TRANSCRIPT STABILITY | RNA, Chloroplast - metabolism | Protein Biosynthesis | RNA Processing, Post-Transcriptional | Molecular Sequence Data | RNA, Chloroplast - chemistry | Regulatory Sequences, Ribonucleic Acid | RNA Stability | RNA, Messenger - metabolism | Chloroplasts - metabolism | Photosystem II Protein Complex - metabolism | Chlamydomonas reinhardtii - genetics | 5' Untranslated Regions | Base Sequence | Photosystem II Protein Complex - genetics | RNA, Small Untranslated - chemistry | Chlamydomonas reinhardtii - metabolism | Mutation | Chloroplast Proteins - metabolism | Chloroplasts - genetics | RNA, Small Untranslated - metabolism | RNA-Binding Proteins - metabolism | RNA
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10. Full Text Photorespiration: current status and approaches for metabolic engineering
by Maurino, Veronica G and Peterhansel, Christoph
Current Opinion in Plant Biology, ISSN 1369-5266, 2010, Volume 13, Issue 3, pp. 248 - 255
Photorespiration results from the oxygenase reaction catalysed by ribulose-1,5-bisphosphate carboxylase/oxygenase and serves as a carbon recovery system. It... 
ARABIDOPSIS-THALIANA | GLYCINE DECARBOXYLASE | SERINE HYDROXYMETHYLTRANSFERASE | HIGHER-PLANTS | CHLAMYDOMONAS-REINHARDTII | CYANOBACTERIA | C-4 PHOTOSYNTHESIS | IDENTIFICATION | GLYCOLATE METABOLISM | ONE-CARBON METABOLISM | PLANT SCIENCES | Glycine - metabolism | Carbon Dioxide - metabolism | Oxidation-Reduction | Ammonia - metabolism | Arabidopsis - growth & development | Glycolates - metabolism | Mitochondria - metabolism | Chloroplasts - metabolism | Peroxisomes - metabolism | Arabidopsis - metabolism | Glyceric Acids - metabolism | Ribulose-Bisphosphate Carboxylase - metabolism | Genetic Engineering | Cell Respiration | Photosynthesis
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11. Full Text An Arabidopsis GluTR Binding Protein Mediates Spatial Separation of 5-Aminolevulinic Acid Synthesis in Chloroplasts
by Olaf Czarnecki and Boris Hedtke and Michael Melzer and Maxi Rothbart and Andreas Richter and Yvonne Schröter and Thomas Pfannschmidt and Bernhard Grimm
The Plant Cell, ISSN 1040-4651, 12/2011, Volume 23, Issue 12, pp. 4476 - 4491
5-Aminolevulinic acid (ALA) is the universal precursor for tetrapyrrole biosynthesis and is synthesized in plants in three enzymatic steps: ligation of... 
Proteins | Enzymes | Yeasts | Chloroplasts | Tetrapyrroles | Thylakoids | Biosynthesis | Plants | Chlorophylls | Seedlings | BIOCHEMISTRY & MOLECULAR BIOLOGY | CHLOROPHYLL BIOSYNTHESIS | MAGNESIUM CHELATASE | ESCHERICHIA-COLI | TETRAPYRROLE BIOSYNTHESIS | HORSERADISH-PEROXIDASE | THALIANA CHLOROPLASTS | PLANT SCIENCES | CELL BIOLOGY | TRANSFER-RNA REDUCTASE | CHLAMYDOMONAS-REINHARDTII | GENE-EXPRESSION | PHOTOSYSTEM-II | Heme - metabolism | Genes, Plant | Agrobacterium tumefaciens - genetics | Molecular Sequence Data | RNA, Plant - metabolism | Chlorophyll - genetics | Arabidopsis Proteins - metabolism | Thylakoid Membrane Proteins - metabolism | Heme - genetics | RNA Interference | Aminolevulinic Acid - metabolism | Escherichia coli - metabolism | Gene Expression Regulation, Plant | Plasmids - genetics | Transcription, Genetic | Recombinant Proteins - metabolism | Amino Acid Sequence | Arabidopsis Proteins - genetics | Chloroplasts - ultrastructure | Plants, Genetically Modified - genetics | Tobacco - metabolism | Recombinant Proteins - genetics | Aldehyde Oxidoreductases - genetics | RNA, Plant - genetics | Thylakoid Membrane Proteins - genetics | Plasmids - metabolism | Chloroplasts - metabolism | Aldehyde Oxidoreductases - metabolism | Arabidopsis - metabolism | Protein Interaction Mapping | Arabidopsis - genetics | Carrier Proteins - genetics | Two-Hybrid System Techniques | Carrier Proteins - metabolism | Plants, Genetically Modified - metabolism | Agrobacterium tumefaciens - metabolism | Escherichia coli - genetics | Tobacco - genetics | Chlorophyll - biosynthesis | Arabidopsis thaliana | Physiological aspects | Amino acids | Research | Binding proteins
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12. Full Text Metabolism of acyl‐lipids in Chlamydomonas reinhardtii
by Li‐Beisson, Yonghua and Beisson, Fred and Riekhof, Wayne
The Plant Journal, ISSN 0960-7412, 05/2015, Volume 82, Issue 3, pp. 504 - 522
Microalgae are emerging platforms for production of a suite of compounds targeting several markets, including food, nutraceuticals, green chemicals, and... 
green microalgae | membrane lipids | microalgal oil | Chlamydomonas reinhardtii | lipases | lipid mutants | biofuels | lipid droplets | acyltransferases | desaturases | DIACYLGLYCEROL ACYLTRANSFERASE | FATTY-ACID SYNTHESIS | BIOFUEL PRODUCTION | GREEN-ALGAE | PLANT-CELLS | PLANT SCIENCES | PLASTID ENVELOPE | TRIACYLGLYCEROL ACCUMULATION | NITROGEN DEPRIVATION | OIL ACCUMULATION | MEMBRANE-LIPIDS | Fatty Acids - chemistry | Chlamydomonas reinhardtii - genetics | Fatty Acid Desaturases - metabolism | Membrane Lipids - metabolism | Lipid Metabolism | Chlamydomonas reinhardtii - metabolism | Fatty Acids - metabolism | Triglycerides - metabolism | Membrane lipids | Unsaturated fatty acids | Synthesis | Analysis | Physiological aspects | Lipase | Fatty acids | Lipids | Metabolism | Algae | Botany
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13. Full Text Systems-Level Analysis of Nitrogen Starvation—Induced Modifications of Carbon Metabolism in a Chlamydomonas reinhardtii Starchless Mutant
by Ian K. Blaby and Anne G. Glaesener and Tabea Mettler and Sorel T. Fitz Gibbon and Sean D. Gallaher and Bensheng Liu and Nanette R. Boyle and Janette Kropat and Mark Stitt and Shannon Johnson and Christoph Benning and Matteo Pellegrini and David Casero and Sabeeha S. Merchant
The Plant Cell, ISSN 1040-4651, 11/2013, Volume 25, Issue 11, pp. 4305 - 4323
To understand the molecular basis underlying increased triacylglycerol (TAG) accumulation in starchless (sta) Chlamydomonas reinhardtii mutants, we undertook... 
Datasets | Enzymes | Messenger RNA | Genes | Lipids | Starches | Genomes | LARGE-SCALE BIOLOGY ARTICLE | Lipid metabolism | Acetates | Plant cells | MATING-TYPE LOCUS | LIPID-METABOLISM | GAMETIC DIFFERENTIATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | GROWTH-RATE | PLANT SCIENCES | CELL BIOLOGY | GREEN-ALGA | FATTY-ACID | TRIACYLGLYCEROL ACCUMULATION | SKELETONEMA-COSTATUM | EXPRESSION | OIL ACCUMULATION | Carbon - metabolism | Nitrogen - metabolism | Reproducibility of Results | Acetates - metabolism | Carbohydrate Metabolism | Starch - metabolism | Transcriptome | Cell Wall - genetics | Molecular Sequence Data | Starch - genetics | Genome, Plant | Chlamydomonas reinhardtii - genetics | Cell Wall - metabolism | Enzymes - genetics | Chlamydomonas reinhardtii - metabolism | Polymorphism, Single Nucleotide | Mutation | Enzymes - metabolism | Botanical research | Gene mutations | Physiological aspects | Genetic aspects | Research | Nitrogen | Health aspects | Carbon | Chlamydomonas | Index Medicus | Large-Scale Biology
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