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Journal Article
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 5/2009, Volume 106, Issue 18, pp. 7654 - 7659
The phytochrome-interacting factor PIF3 has been proposed to act as a positive regulator of chloroplast development. Here, we show that the pif3 mutant has a... 
Hems | Phenotypes | Chloroplasts | Plant growth regulators | Tetrapyrroles | Germination | Gene expression regulation | Plants | Chlorophylls | Seedlings | Circadian regulation | Chlorophyll synthesis | Etioplast light signaling | Phytochrome | phytochrome | ARABIDOPSIS-THALIANA | light signaling | MULTIDISCIPLINARY SCIENCES | CHLOROPHYLL BIOSYNTHESIS | FUNCTIONAL-CHARACTERIZATION | etioplast | PHYTOCHROME INTERACTING FACTOR-3 | BHLH TRANSCRIPTION FACTORS | TETRAPYRROLE BIOSYNTHESIS | circadian regulation | NEGATIVE REGULATOR | LOOP-HELIX PROTEIN | chlorophyll synthesis | DE-ETIOLATION | LIGHT SIGNAL-TRANSDUCTION | Tetrapyrroles - biosynthesis | Darkness | Arabidopsis Proteins - genetics | Basic Helix-Loop-Helix Transcription Factors - genetics | Arabidopsis - growth & development | Arabidopsis - ultrastructure | Repressor Proteins - genetics | Seedlings - genetics | Aldehyde Oxidoreductases - genetics | Circadian Rhythm | Protochlorophyllide - metabolism | Seedlings - growth & development | Seedlings - ultrastructure | Arabidopsis - genetics | Arabidopsis Proteins - metabolism | Basic Helix-Loop-Helix Transcription Factors - metabolism | Gene Expression Regulation, Plant | Chloroplasts - physiology | Tetrapyrroles - genetics | Mutation | Chloroplasts - genetics | Repressor Proteins - metabolism | Physiological aspects | Research | Chemical properties | Botany | Biological Sciences
Journal Article
The Plant Cell, ISSN 1040-4651, 11/2009, Volume 21, Issue 11, pp. 3535 - 3553
Light signals perceived by the phytochromes induce the transition from skotomorphogenic to photomorphogenic development (deetiolation) in dark-germinated... 
Datasets | Phenotypes | Cotyledons | Transcriptional regulatory elements | Genes | Gene expression regulation | Plants | Gene expression | Seedlings | Plant cells | GLYOXYLATE CYCLE | SEED-GERMINATION | REGULATED GENE-EXPRESSION | RED-LIGHT | BIOCHEMISTRY & MOLECULAR BIOLOGY | CHLOROPHYLL BIOSYNTHESIS | PHYTOCHROME-INTERACTING FACTOR | NEGATIVE REGULATOR | PLANT SCIENCES | CELL BIOLOGY | SIGNAL-TRANSDUCTION | LOOP-HELIX PROTEIN | CHLOROPLAST DEVELOPMENT | Darkness | Transcriptional Activation - genetics | Arabidopsis - growth & development | Transcription, Genetic - radiation effects | Gene Expression Regulation, Developmental - genetics | Seedlings - genetics | Light Signal Transduction - genetics | Seedlings - growth & development | Arabidopsis Proteins - metabolism | Phytochrome - radiation effects | Basic Helix-Loop-Helix Transcription Factors - metabolism | Light | Phytochrome - metabolism | Phytochrome - genetics | Arabidopsis Proteins - genetics | Gene Expression Regulation, Plant - radiation effects | Basic Helix-Loop-Helix Transcription Factors - genetics | Morphogenesis - genetics | Morphogenesis - radiation effects | Transcriptional Activation - radiation effects | Gene Expression Regulation, Plant - genetics | Transcription Factors - genetics | Mutation - genetics | Arabidopsis - metabolism | Arabidopsis - genetics | Transcription Factors - metabolism | Gene Expression Regulation, Developmental - radiation effects | Transcription, Genetic - genetics | Photic Stimulation | Seedlings - metabolism | Transcription factors | Arabidopsis | Physiological aspects | Genetic aspects | Research | Photomorphogenesis
Journal Article
Journal Article
PLoS Pathogens, ISSN 1553-7366, 05/2011, Volume 7, Issue 5, p. e1002021
Symptoms on virus-infected plants are often very specific to the given virus. The molecular mechanisms involved in viral symptom induction have been... 
SUPPRESSOR | CUCUMBER-MOSAIC-VIRUS | SIRNA BIOGENESIS | MICROBIOLOGY | MICRORNAS | MAINTENANCE | GEMINIVIRUS | PATHOGENICITY | VIROLOGY | DEFECTIVE INTERFERING RNAS | PLANT-VIRUSES | TOMATO | PARASITOLOGY | RNA, Small Interfering - genetics | Genes, Plant | Molecular Sequence Data | Lyases - metabolism | RNA, Messenger - metabolism | Chlorophyll - genetics | Cucumber Mosaic Virus Satellite - metabolism | Plant Diseases - virology | RNA, Viral - genetics | RNA Interference | Base Sequence | Gene Expression Regulation, Plant | Tobacco - virology | Capsicum - virology | Cucumovirus - pathogenicity | Lyases - genetics | Lycopersicon esculentum - genetics | Plant Diseases - genetics | RNA, Viral - metabolism | Arabidopsis - virology | Plants, Genetically Modified - virology | Plants, Genetically Modified - genetics | Down-Regulation | Lycopersicon esculentum - virology | RNA, Messenger - genetics | Plants, Genetically Modified - enzymology | Cucumovirus - metabolism | Cucumber Mosaic Virus Satellite - genetics | Capsicum - genetics | Arabidopsis - genetics | Host-Pathogen Interactions | Phenotype | Tobacco - genetics | Tobacco - enzymology | Chlorophyll - biosynthesis | RNA, Small Interfering - metabolism | Physiological aspects | Chlorophyll | Usage | Genetic engineering | Genetic aspects | Research | Satellites | Tobacco | Disease | Viruses | Biosynthesis | Experiments | Machinery
Journal Article
PLoS Genetics, ISSN 1553-7390, 09/2017, Volume 13, Issue 9, p. e1007022
Disruption of protein homeostasis in chloroplasts impairs the correct functioning of essential metabolic pathways, including the methylerythritol 4-phosphate... 
MITOCHONDRIAL UPR | SHOCK PROTEINS | BIOGENESIS | PATHWAY | VAR2-MEDIATED LEAF VARIEGATION | MUTANT REVEALS | GENETICS & HEREDITY | QUALITY CONTROL | PLANT DEVELOPMENT | HEAT-STRESS RESPONSE | CHLAMYDOMONAS | Arabidopsis Proteins - genetics | Signal Transduction | Unfolded Protein Response - genetics | Molecular Chaperones - genetics | Seedlings - genetics | Endopeptidase Clp - genetics | HSP70 Heat-Shock Proteins - genetics | Genome, Plant | Transcription Factors - genetics | DNA-Binding Proteins - genetics | Lincomycin - pharmacology | Heat Shock Transcription Factors | Arabidopsis - genetics | Heat-Shock Proteins - genetics | Plant Proteins - genetics | Gene Expression Regulation, Plant - drug effects | Photosynthesis - genetics | Plants, Genetically Modified | Chloroplasts - genetics | HSP70 Heat-Shock Proteins - biosynthesis | Plant proteins | Arabidopsis thaliana | Protein folding | Physiological aspects | Homeostasis | Genetic aspects | Observations | Gene expression | Transcription factors | Genomics | Proteinase | Genes | Plant resistance | Biosynthesis | Genomes | Activation | Chaperones | Solubilization | Heat shock factors | Proteins | Signal transduction | Mitochondria | Carotenoids | Pathways | Lincomycin | Chloroplasts | Metabolites | Protease | Factories | Enzymes | Protein biosynthesis | Hsp70 protein | Metabolism | Retrograde transport | Seedlings | Protein synthesis | Proteases | Quality control | Metabolic pathways | Mutation | Terpenes | Photosynthesis | Heat shock
Journal Article
BMC Plant Biology, ISSN 1471-2229, 07/2012, Volume 12, Issue 1, pp. 118 - 118
Background: The eukaryotic translation initiation factor 5A (eIF5A) promotes formation of the first peptide bond at the onset of protein synthesis. However,... 
EIF5A | YEAST | SALT STRESS | ARABIDOPSIS-THALIANA | GENE | TRANSCRIPTION FACTOR | PROTEIN-SYNTHESIS | EXPRESSION | BINDING | CELL-DEATH | PLANT SCIENCES | Adaptation, Physiological | RNA-Binding Proteins - genetics | Superoxide Dismutase - genetics | Saccharomyces cerevisiae - genetics | Sodium Chloride - pharmacology | Regulatory Sequences, Nucleic Acid | Stress, Physiological | Cell Membrane - genetics | Chlorophyll - genetics | Saccharomyces cerevisiae - metabolism | Cloning, Molecular | Gene Expression Regulation, Plant | Abscisic Acid - metabolism | Cell Membrane - metabolism | Plant Proteins - metabolism | Superoxide Dismutase - metabolism | Tamaricaceae - physiology | Transformation, Genetic | Plants, Genetically Modified - physiology | Promoter Regions, Genetic | Salt-Tolerant Plants - metabolism | Plants, Genetically Modified - genetics | Signal Transduction | Solubility | Tamaricaceae - metabolism | Chlorophyll - metabolism | Transcription Factors - genetics | Tamaricaceae - genetics | Peptide Initiation Factors - metabolism | Transcription Factors - metabolism | Abscisic Acid - pharmacology | Peptide Initiation Factors - genetics | Plant Proteins - genetics | Plants, Genetically Modified - metabolism | Peroxidase - genetics | Genetic Vectors | RNA-Binding Proteins - metabolism | Peroxidase - metabolism | Salt-Tolerant Plants - genetics | Salt-Tolerant Plants - physiology | Physiological aspects | Transcription factors | Genetic aspects | Stress (Physiology) | Research | Peptides | Chlorophyll | Abscisic acid | Protein biosynthesis | Superoxide | Genetic engineering | DNA binding proteins | Genetic translation | Protein binding | Trees | Yeast | Microbiology | Abiotic stress | Cloning | Molecular weight | Proteins | Studies | Signal transduction | Protein synthesis | Cell cycle | Phylogenetics | Apoptosis
Journal Article
The Plant Cell, ISSN 1040-4651, 12/2011, Volume 23, Issue 12, pp. 4476 - 4491
5-Aminolevulinic acid (ALA) is the universal precursor for tetrapyrrole biosynthesis and is synthesized in plants in three enzymatic steps: ligation of... 
Proteins | Enzymes | Yeasts | Chloroplasts | Tetrapyrroles | Thylakoids | Biosynthesis | Plants | Chlorophylls | Seedlings | BIOCHEMISTRY & MOLECULAR BIOLOGY | CHLOROPHYLL BIOSYNTHESIS | MAGNESIUM CHELATASE | ESCHERICHIA-COLI | TETRAPYRROLE BIOSYNTHESIS | HORSERADISH-PEROXIDASE | THALIANA CHLOROPLASTS | PLANT SCIENCES | CELL BIOLOGY | TRANSFER-RNA REDUCTASE | CHLAMYDOMONAS-REINHARDTII | GENE-EXPRESSION | PHOTOSYSTEM-II | Heme - metabolism | Genes, Plant | Agrobacterium tumefaciens - genetics | Molecular Sequence Data | RNA, Plant - metabolism | Chlorophyll - genetics | Arabidopsis Proteins - metabolism | Thylakoid Membrane Proteins - metabolism | Heme - genetics | RNA Interference | Aminolevulinic Acid - metabolism | Escherichia coli - metabolism | Gene Expression Regulation, Plant | Plasmids - genetics | Transcription, Genetic | Recombinant Proteins - metabolism | Amino Acid Sequence | Arabidopsis Proteins - genetics | Chloroplasts - ultrastructure | Plants, Genetically Modified - genetics | Tobacco - metabolism | Recombinant Proteins - genetics | Aldehyde Oxidoreductases - genetics | RNA, Plant - genetics | Thylakoid Membrane Proteins - genetics | Plasmids - metabolism | Chloroplasts - metabolism | Aldehyde Oxidoreductases - metabolism | Arabidopsis - metabolism | Protein Interaction Mapping | Arabidopsis - genetics | Carrier Proteins - genetics | Two-Hybrid System Techniques | Carrier Proteins - metabolism | Plants, Genetically Modified - metabolism | Agrobacterium tumefaciens - metabolism | Escherichia coli - genetics | Tobacco - genetics | Chlorophyll - biosynthesis | Arabidopsis thaliana | Physiological aspects | Amino acids | Research | Binding proteins
Journal Article
The Plant Cell, ISSN 1040-4651, 11/2009, Volume 21, Issue 11, pp. 3473 - 3492
We hypothesized that chloroplast energy imbalance sensed through alterations in the redox state of the photosynthetic electron transport chain, measured as... 
Cotyledons | Phenotypes | Chloroplasts | Greening | Photons | Plants | Irradiance | Chlorophylls | Seedlings | Plant cells | ALTERNATIVE OXIDASE | BIOCHEMISTRY & MOLECULAR BIOLOGY | PLASTOQUINONE POOL | CHLORELLA-VULGARIS | PLANT SCIENCES | CELL BIOLOGY | ENERGY-BALANCE | HARVESTING COMPLEX-II | GENE-EXPRESSION | PHOTOSYSTEM-II | PLASTID TERMINAL OXIDASE | MG-PROTOPORPHYRIN IX | CHLOROPLAST BIOGENESIS | ATP-Dependent Proteases - genetics | Temperature | Arabidopsis - growth & development | Mitochondrial Proteins | Genetic Variation - physiology | Metalloproteases - metabolism | Arabidopsis Proteins - metabolism | Mutation - physiology | Mitochondria - genetics | Light | Photosynthesis - physiology | Thylakoids - genetics | Membrane Proteins - metabolism | Energy Metabolism - genetics | Chloroplasts - genetics | Arabidopsis Proteins - genetics | Oxidation-Reduction | Oxidoreductases - metabolism | Membrane Proteins - genetics | Oxidoreductases - genetics | Gene Expression Regulation, Plant - genetics | Metalloproteases - genetics | Electron Transport Chain Complex Proteins - genetics | Mitochondria - metabolism | Cotyledon - genetics | Cotyledon - metabolism | Chloroplasts - metabolism | Thylakoids - metabolism | Arabidopsis - metabolism | Arabidopsis - genetics | Phenotype | Plant Leaves - genetics | Plant Leaves - metabolism | Plant Leaves - growth & development | Electron Transport Chain Complex Proteins - metabolism | Cotyledon - growth & development | Plant Proteins | Photic Stimulation | ATP-Dependent Proteases - metabolism | Arabidopsis thaliana | Physiological aspects | Leaves | Genetic aspects | Variegation | Research
Journal Article
The Plant Cell, ISSN 1040-4651, 5/2013, Volume 25, Issue 5, pp. 1657 - 1673
The critical developmental switch from heterotrophic to autotrophic growth of plants involves light signaling transduction and the production of reactive... 
Reactive oxygen species | Singlet oxygen | Cell death | RESEARCH ARTICLES | Genes | DNA | Fluorescence | Gene expression regulation | Plants | Seedlings | Plant cells | FACTOR HY5 | BIOCHEMISTRY & MOLECULAR BIOLOGY | CHLOROPHYLL BIOSYNTHESIS | MEDIATED DEGRADATION | PHYTOCHROME INTERACTING FACTOR-3 | PLANT SCIENCES | CELL BIOLOGY | PROGRAMMED CELL-DEATH | STRESS RESPONSES | CHLOROPLAST DEVELOPMENT | GENOME-WIDE ANALYSIS | GENE-EXPRESSION | SINGLET OXYGEN | Basic-Leucine Zipper Transcription Factors - metabolism | Reactive Oxygen Species - metabolism | Cryptochromes - genetics | Seedlings - genetics | Immunoblotting | Gene Expression Profiling | Promoter Regions, Genetic - genetics | Arabidopsis Proteins - metabolism | Arabidopsis - radiation effects | Basic Helix-Loop-Helix Transcription Factors - metabolism | Light | Phytochrome - metabolism | Plants, Genetically Modified | Signal Transduction - radiation effects | Nuclear Proteins - genetics | Phytochrome - genetics | Cryptochromes - metabolism | Arabidopsis Proteins - genetics | Gene Expression Regulation, Plant - radiation effects | Basic Helix-Loop-Helix Transcription Factors - genetics | Nuclear Proteins - metabolism | Signal Transduction - genetics | Basic-Leucine Zipper Transcription Factors - genetics | Reverse Transcriptase Polymerase Chain Reaction | Arabidopsis - metabolism | Arabidopsis - genetics | Carrier Proteins - genetics | Carrier Proteins - metabolism | Protein Binding | Mutation | Seedlings - radiation effects | Seedlings - metabolism | Antagonists (Biochemistry) | Arabidopsis thaliana | Physiological aspects | Genetic aspects | Genetic transcription | Research | Photosynthesis | Health aspects
Journal Article