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The Plant cell, ISSN 1532-298X, 2012, Volume 24, Issue 7, pp. 2765 - 2778
Journal Article
Journal Article
Nature (London), ISSN 1476-4687, 2002, Volume 419, Issue 6905, pp. 403 - 407
The 26S proteasome is responsible for most intracellular proteolysis in eukaryotes. Efficient substrate recognition relies on conjugation of substrates with... 
REGULATORY PARTICLE | SIGNAL | DOMAIN | THERMODYNAMICS | GENE | UBIQUITIN | ENZYMES | MULTIDISCIPLINARY SCIENCES | SACCHAROMYCES-CEREVISIAE | ATP | Cysteine Endopeptidases - chemistry | Protein Subunits | Drug Resistance, Multiple | Peptide Hydrolases - genetics | Saccharomyces cerevisiae - genetics | Zinc - metabolism | Molecular Sequence Data | Multienzyme Complexes - metabolism | Proteasome Endopeptidase Complex | Trans-Activators - chemistry | Cell Cycle Proteins - chemistry | Genes, Lethal | Endopeptidases - chemistry | Cysteine Endopeptidases - metabolism | Cattle | Protein Denaturation | Cell Cycle Proteins - genetics | Ovomucin - chemistry | Genes, Fungal - genetics | Ubiquitins - metabolism | Peptide Hydrolases - metabolism | Protein Structure, Tertiary | Amino Acid Sequence | Endopeptidases - metabolism | Ovomucin - metabolism | Cell Cycle Proteins - metabolism | Adenosine Triphosphatases - metabolism | Multienzyme Complexes - genetics | Saccharomyces cerevisiae Proteins - genetics | Blotting, Western | Peptide Hydrolases - chemistry | Macromolecular Substances | Multienzyme Complexes - chemistry | Animals | Endopeptidases - genetics | Cysteine Endopeptidases - genetics | Saccharomyces cerevisiae Proteins - metabolism | Saccharomyces cerevisiae - enzymology | Adenosine Triphosphatases - chemistry | Trans-Activators - metabolism | Adenosine Triphosphatases - genetics | Protein Processing, Post-Translational | Kinetics | Saccharomyces cerevisiae Proteins - chemistry | Cellular biology | Molecules | Biochemistry
Journal Article
Molecular cell, ISSN 1097-2765, 2002, Volume 10, Issue 3, pp. 495 - 507
We have identified proteins that are abundant in affinity-purified proteasomes, but absent from proteasomes as previously defined because elevated salt... 
YEAST | COMPLEX | DOMAIN | DOA4 DEUBIQUITINATING ENZYME | PATHWAY | UBIQUITIN | BIOCHEMISTRY & MOLECULAR BIOLOGY | 26S PROTEASOME | IDENTIFICATION | SACCHAROMYCES-CEREVISIAE | CORE PARTICLE | CELL BIOLOGY | Cysteine Endopeptidases - chemistry | Ligases - isolation & purification | Ligases - genetics | Multienzyme Complexes - metabolism | Proteasome Endopeptidase Complex | Recombinant Fusion Proteins - metabolism | Protein Subunits - metabolism | Saccharomyces cerevisiae - metabolism | Salts - chemistry | Cysteine Endopeptidases - metabolism | Protein Subunits - isolation & purification | Adenosine Triphosphate - metabolism | Saccharomyces cerevisiae Proteins - isolation & purification | Binding Sites | Endopeptidases - isolation & purification | Protein Subunits - genetics | Multienzyme Complexes - ultrastructure | Endopeptidases - metabolism | Ligases - metabolism | Saccharomyces cerevisiae Proteins - genetics | Canavanine - metabolism | Multienzyme Complexes - chemistry | Proteins - genetics | Ubiquitin-Protein Ligases | Endopeptidases - genetics | Proteins - metabolism | Cysteine Endopeptidases - isolation & purification | Saccharomyces cerevisiae Proteins - metabolism | Protein Binding | Recombinant Fusion Proteins - genetics | Cysteine Endopeptidases - ultrastructure | Multienzyme Complexes - isolation & purification
Journal Article
The Journal of Immunology, ISSN 0022-1767, 10/2008, Volume 181, Issue 8, pp. 5537 - 5544
The periodontal pathogen Porphyromonas gingivalis is highly resistant to the bactericidal activity of human complement, which is present in the gingival... 
GINGIPAINS | BACTEROIDES-GINGIVALIS | OUTER-MEMBRANE | PERIODONTAL-DISEASES | ALPHA-CHAIN | CYSTEINE PROTEINASES | APOPTOTIC CELLS | SURFACE-PROTEINS | NEISSERIA-GONORRHOEAE | IMMUNOLOGY | C4B BINDING | Porphyromonas gingivalis - enzymology | Protein Binding - genetics | Virulence Factors - genetics | Porphyromonas gingivalis - pathogenicity | Adhesins, Bacterial - genetics | Humans | Bacteroidaceae Infections - genetics | Virulence Factors - immunology | Complement Activation - immunology | Blood Bactericidal Activity - genetics | Adhesins, Bacterial - metabolism | Complement C9 - immunology | Cysteine Endopeptidases - metabolism | Complement C4b-Binding Protein - genetics | Complement C4b-Binding Protein - immunology | Porphyromonas gingivalis - immunology | Bacteroidaceae Infections - enzymology | Complement C9 - metabolism | Complement C4b-Binding Protein - metabolism | Blood Bactericidal Activity - immunology | Protein Structure, Tertiary - genetics | Protein Binding - immunology | Protein Structure, Secondary - genetics | Complement Activation - genetics | Bacteroidaceae Infections - immunology | Cysteine Endopeptidases - genetics | Ligands | Virulence Factors - metabolism | Complement C9 - genetics | Mutation | Adhesins, Bacterial - immunology | Cysteine Endopeptidases - immunology | Protein Binding: genetics | Adhesins | Medical and Health Sciences | Protein Binding: immunology | Complement C9: immunology | Medicin och hälsovetenskap | Complement C4b-Binding Protein: metabolism | Immunologi inom det medicinska området | Complement C4b-Binding Protein: immunology | Bacteroidaceae Infections: genetics | Porphyromonas gingivalis: pathogenicity | Cysteine Endopeptidases: metabolism | Virulence Factors: genetics | Cysteine Endopeptidases: genetics | Complement Activation: genetics | Porphyromonas gingivalis: immunology | Virulence Factors: metabolism | Immunology in the medical area | Basic Medicine | Bacterial: genetics | Bacterial: immunology | Bacteroidaceae Infections: enzymology | Protein Structure | Complement Activation: immunology | Secondary: genetics | Blood Bactericidal Activity: immunology | Complement C9: metabolism | Complement C4b-Binding Protein: genetics | Porphyromonas gingivalis: enzymology | Complement C9: genetics | Bacterial: metabolism | Medicinska och farmaceutiska grundvetenskaper | Virulence Factors: immunology | Cysteine Endopeptidases: immunology | Tertiary: genetics | Blood Bactericidal Activity: genetics | Bacteroidaceae Infections: immunology
Journal Article
Proceedings of the National Academy of Sciences - PNAS, ISSN 1091-6490, 2011, Volume 108, Issue 28, pp. 11399 - 11404
The ability to routinely generate efficient protein catalysts of bond-forming reactions chosen by researchers, rather than nature, is a long-standing goal of... 
Directed molecular evolution | Enzymes | Yeasts | HeLa cells | Fluorescence | Evolution | Libraries | Kinetics | Genetic mutation | Enzyme substrates | MUTAGENESIS | TRANSPEPTIDASE-SRTA | COMPUTATIONAL DESIGN | MULTIDISCIPLINARY SCIENCES | SFP PHOSPHOPANTETHEINYL TRANSFERASE | STAPHYLOCOCCUS-AUREUS | SURFACE DISPLAY | SELECTION | DIRECTED EVOLUTION | Cysteine Endopeptidases - chemistry | Enzymes - chemistry | Directed Molecular Evolution - methods | Staphylococcus aureus - enzymology | Saccharomyces cerevisiae - genetics | Humans | Aminoacyltransferases - genetics | Bacterial Proteins - chemistry | Molecular Sequence Data | Substrate Specificity | Peptide Library | Cysteine Endopeptidases - metabolism | Base Sequence | Enzymes - genetics | Protein Engineering | Catalysis | Enzymes - metabolism | Recombinant Proteins - metabolism | Staphylococcus aureus - genetics | Amino Acid Sequence | Aminoacyltransferases - chemistry | DNA, Recombinant - genetics | Escherichia coli - enzymology | Gene Library | Bacterial Proteins - genetics | Mutant Proteins - genetics | Models, Molecular | Recombinant Proteins - chemistry | Mutant Proteins - metabolism | Recombinant Proteins - genetics | Escherichia coli - genetics | Cysteine Endopeptidases - genetics | Mutant Proteins - chemistry | Saccharomyces cerevisiae - enzymology | Aminoacyltransferases - metabolism | Bacterial Proteins - metabolism | HeLa Cells | Yeast fungi | Plant genetics | Physiological aspects | Genetic aspects | Research | Biological Sciences
Journal Article
FEBS letters, ISSN 0014-5793, 2016, Volume 590, Issue 24, pp. 4573 - 4585
The ubiquitin mutant UBB+1 has been identified as a hallmark of neurodegenerative diseases. In this study, we characterize polyubiquitinated forms of UBB+1 in... 
biomolecular NMR | neurodegeneration | polyubiquitin | UBB +1 | deubiquitinase | UBB | PROTEIN | SPECIFICITY | BIOCHEMISTRY & MOLECULAR BIOLOGY | DISORDERS | CONFORMATION | CELL BIOLOGY | INHIBITION | BIOPHYSICS | STRUCTURAL BASIS | SUBSTRATE | UBB+1 | CHAINS | ALZHEIMERS | REVEALS | Cysteine Endopeptidases - chemistry | Neurons - pathology | Ubiquitin-Specific Proteases - genetics | Humans | Middle Aged | Ubiquitin - metabolism | Endosomal Sorting Complexes Required for Transport - genetics | Male | Case-Control Studies | Polyubiquitin - genetics | Alzheimer Disease - pathology | Ubiquitin-Specific Proteases - chemistry | Endopeptidases - chemistry | Ubiquitination | Cysteine Endopeptidases - metabolism | Protein Isoforms - metabolism | Protein Isoforms - chemistry | Nuclear Magnetic Resonance, Biomolecular | Ubiquitin Thiolesterase - metabolism | Female | Endosomal Sorting Complexes Required for Transport - chemistry | Neurons - metabolism | Ubiquitin-Specific Proteases - metabolism | Polyubiquitin - chemistry | Polyubiquitin - metabolism | Endopeptidases - metabolism | Fluoresceins - chemistry | Fluorescent Dyes - chemistry | Protein Structure, Secondary | Endosomal Sorting Complexes Required for Transport - metabolism | Gene Expression Regulation | Ubiquitin - chemistry | Models, Molecular | Ubiquitin - genetics | Ubiquitin Thiolesterase - genetics | Endopeptidases - genetics | Cysteine Endopeptidases - genetics | Staining and Labeling | Alzheimer Disease - metabolism | Aged | Proteasome Endopeptidase Complex - metabolism | Alzheimer Disease - genetics | Ubiquitin Thiolesterase - chemistry | Protein Isoforms - genetics
Journal Article
Journal of Virology, ISSN 0022-538X, 2016, Volume 90, Issue 24, pp. 11106 - 11121
Journal Article
Proceedings of the National Academy of Sciences - PNAS, ISSN 1091-6490, 2016, Volume 113, Issue 21, pp. 5999 - 6004
Cancer cells develop under immune surveillance, thus necessitating immune escape for successful growth. Loss of MHC class I expression provides a key immune... 
NLRC5 | Immune evasion | Mhc class I | CITA | Cancer | CELLS | HLA CLASS-I | MULTIDISCIPLINARY SCIENCES | MHC class I | NUCLEOTIDE-BINDING DOMAIN | TUMORS | MHC CLASS-I | BREAST-CANCER | RESPONSES | CARCINOGENESIS | immune evasion | GENE-EXPRESSION | cancer | ANTIGEN | ATP-Binding Cassette Sub-Family B Member 2 - immunology | Tumor Escape | CD8-Positive T-Lymphocytes - pathology | Humans | Neoplasm Proteins - immunology | Intracellular Signaling Peptides and Proteins - immunology | Male | Transcriptional Activation - immunology | beta 2-Microglobulin - immunology | Antigen Presentation | Neoplasms - genetics | Trans-Activators - genetics | Female | Neoplasm Proteins - genetics | Intracellular Signaling Peptides and Proteins - genetics | Proteasome Endopeptidase Complex - immunology | Trans-Activators - immunology | Histocompatibility Antigens Class I - immunology | Neoplasms - mortality | Gene Expression Regulation, Neoplastic - immunology | ATP-Binding Cassette Sub-Family B Member 2 - genetics | Histocompatibility Antigens Class I - genetics | Proteasome Endopeptidase Complex - genetics | Neoplasms - immunology | Cysteine Endopeptidases - genetics | Biomarkers, Tumor - genetics | CD8-Positive T-Lymphocytes - immunology | Neoplasms - pathology | Biomarkers, Tumor - immunology | Cysteine Endopeptidases - immunology | beta 2-Microglobulin - genetics | Biological Sciences
Journal Article
International journal for parasitology, ISSN 0020-7519, 2007, Volume 37, Issue 7, pp. 713 - 724
Journal Article