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Nature Protocols, ISSN 1754-2189, 11/2015, Volume 10, Issue 11, pp. 1643 - 1669
.... Mutational profiling (MaP) identifies modified residues by using reverse transcriptase to misread a SHAPEAPEAPE-modified nucleotide and then counting the resulting mutations by massively parallel sequencing... 
REAGENT | BIOCHEMICAL RESEARCH METHODS | ARCHITECTURE | SINGLE-NUCLEOTIDE RESOLUTION | SECONDARY STRUCTURE | PARTITION-FUNCTION | REVEALS | Computational Biology - methods | RNA Processing, Post-Transcriptional | Models, Molecular | Mutation | Nucleic Acid Conformation | RNA - chemistry | Molecular Biology - methods | Acylation | Hydroxides | RNA | Gene mutations | Analysis | DNA polymerases | Influence | Research | Methods | motif discovery | mutational profiling | structure modeling | chemical probing
Journal Article
Genome research, ISSN 1088-9051, 2012, Volume 22, Issue 8, pp. 1589 - 1598
Journal Article
Nature communications, ISSN 2041-1723, 2016, Volume 7, Issue 1, p. 10536
...) lines, which would compromise their use for cell therapies. Here we report comparative genomic analysis of nine isogenic iPSC lines generated using three reprogramming methods... 
STEM-CELLS | COPY-NUMBER | DNA | MULTIDISCIPLINARY SCIENCES | FRAMEWORK | GENERATION | VARIANT ANNOTATION | Induced Pluripotent Stem Cells - chemistry | Humans | Cell Differentiation | Fibroblasts - cytology | Mutation | DNA Mutational Analysis - methods | Genome | Genomics - methods | Induced Pluripotent Stem Cells - cytology | Fibroblasts - chemistry
Journal Article
by Alexandrov, Ludmil B and Nik-Zainal, Serena and Wedge, David C and Aparicio, Samuel A. J. R and Behjati, Sam and Biankin, Andrew V and Bignell, Graham R and Bolli, Niccolò and Borg, Ake and Børresen-Dale, Anne-Lise and Boyault, Sandrine and Burkhardt, Birgit and Butler, Adam P and Caldas, Carlos and Davies, Helen R and Desmedt, Christine and Eils, Roland and Eyfjörd, Jórunn Erla and Foekens, John A and Greaves, Mel and Hosoda, Fumie and Hutter, Barbara and Ilicic, Tomislav and Imbeaud, Sandrine and Imielinski, Marcin and Jäger, Natalie and Jones, David T. W and Jones, David and Knappskog, Stian and Kool, Marcel and Lakhani, Sunil R and López-Otín, Carlos and Martin, Sancha and Munshi, Nikhil C and Nakamura, Hiromi and Northcott, Paul A and Pajic, Marina and Papaemmanuil, Elli and Paradiso, Angelo and Pearson, John V and Puente, Xose S and Raine, Keiran and Ramakrishna, Manasa and Richardson, Andrea L and Richter, Julia and Rosenstiel, Philip and Schlesner, Matthias and Schumacher, Ton N and Span, Paul N and Teague, Jon W and Totoki, Yasushi and Tutt, Andrew N. J and Valdés-Mas, Rafael and van Buuren, Marit M and van ’t Veer, Laura and Vincent-Salomon, Anne and Waddell, Nicola and Yates, Lucy R and Zucman-Rossi, Jessica and Andrew Futreal, P and McDermott, Ultan and Lichter, Peter and Meyerson, Matthew and Grimmond, Sean M and Siebert, Reiner and Campo, Elías and Shibata, Tatsuhiro and Pfister, Stefan M and Campbell, Peter J and Stratton, Michael R and ICGC MMML-Seq Consortium and ICGC PedBrain and ICGC Breast Cancer Consortium and Australian Pancreatic Cancer Genome Initiative and ICGC Breast Canc Consortium and Australian Pancreatic Canc Genome
Nature (London), ISSN 1476-4687, 2013, Volume 500, Issue 7463, pp. 415 - 421
Journal Article
Nature genetics, ISSN 1061-4036, 02/2015, Volume 47, Issue 8, pp. 872 - 877
Journal Article
Nature (London), ISSN 1476-4687, 2012, Volume 486, Issue 7403, pp. 395 - 399
Journal Article
Nature medicine, ISSN 1546-170X, 2017, Volume 23, Issue 4, pp. 517 - 525
Journal Article