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1. Full Text Hairpin bisulfite sequencing: Synchronous methylation analysis on complementary DNA strands of individual chromosomes
by Giehr, Pascal and Walter, Jörn
Methods in Molecular Biology, ISSN 1064-3745, 2018, Volume 1708, pp. 573 - 586
The accurate and quantitative detection of 5-methylcytosine is of great importance in the field of epigenetics. The method of choice is usually bisulfite... 
Restriction | Chromosome | Hairpin bisulfite sequencing | ssDNA circles | DNA strands | Covalent linking | Index Medicus
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2. Full Text The reality of pervasive transcription
by Clark, Michael B and Amaral, Paulo P and Schlesinger, Felix J and Dinger, Marcel E and Taft, Ryan J and Rinn, John L and Ponting, Chris P and Stadler, Peter F and Morris, Kevin V and Morillon, Antonin and Rozowsky, Joel S and Gerstein, Mark B and Wahlestedt, Claes and Hayashizaki, Yoshihide and Carninci, Piero and Gingeras, Thomas R and Mattick, John S
PLoS Biology, ISSN 1544-9173, 07/2011, Volume 9, Issue 7, pp. e1000625; discussion e1001102 - e1000625; discussion e1001102
  In parallel, whole chromosome tiling array interrogation of the RNA content of a variety of human tissues and cell lines revealed that, collectively, at... 
LONG NONCODING RNAS | NUMBERS | MAPS | BIOCHEMISTRY & MOLECULAR BIOLOGY | BIOLOGY | ARCHITECTURE | REVEAL | IDENTIFICATION | EXPRESSION | GENOME | SEQ | DNA, Complementary - analysis | Epigenomics | Oligonucleotide Array Sequence Analysis - methods | Humans | DNA, Complementary - genetics | Databases, Genetic | Expressed Sequence Tags - chemistry | Mammals | Sequence Analysis, RNA - methods | Artifacts | Animals | Transcription, Genetic | DNA, Complementary - chemistry | Genome | Proteins | Medical research | Genomes | Arrays | Index Medicus
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3. Full Text Microfluidic single-cell whole-transcriptome sequencing
by Aaron M. Streets and Xiannian Zhang and Chen Cao and Yuhong Pang and Xinglong Wu and Liang Xiong and Lu Yang and Yusi Fu and Liang Zhao and Fuchou Tang and Yanyi Huang
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 5/2014, Volume 111, Issue 19, pp. 7048 - 7053
Single-cell whole-transcriptome analysis is a powerful tool for quantifying gene expression heterogeneity in populations of cells. Many techniques have, thus,... 
Transcriptomes | RNA | Complementary DNA | Genetic variation | Genes | Stem cells | Libraries | Embryonic cells | Embryonic stem cells | Cells | Embryonic stem cell | Lab on chip | Genomics | LANDSCAPE | MULTIDISCIPLINARY SCIENCES | QPCR | LEVEL | HETEROGENEITY | AMPLIFICATION | embryonic stem cell | EMBRYONIC STEM-CELLS | GENE-EXPRESSION | STOCHASTICITY | genomics | lab on chip | MESSENGER-RNA-SEQ | SMART-SEQ2 | DNA, Complementary - analysis | Reproducibility of Results | Gene Library | Single-Cell Analysis - standards | RNA, Messenger - genetics | DNA, Complementary - genetics | Genomics - standards | RNA, Messenger - analysis | Transcriptome - genetics | Mice, 129 Strain | Embryonic Stem Cells - physiology | High-Throughput Nucleotide Sequencing - standards | Sequence Analysis, RNA - methods | Artifacts | Microfluidics - standards | Animals | Single-Cell Analysis - methods | Mice | Sequence Analysis, RNA - standards | Genomics - methods | High-Throughput Nucleotide Sequencing - methods | Microfluidics - methods | Usage | Research | Nucleotide sequencing | Genetic transcription | Gene expression | DNA sequencing | Ribonucleic acid--RNA | Rodents | Deoxyribonucleic acid--DNA | Index Medicus | Biological Sciences | Physical Sciences
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4. Full Text In vitro induction of apoptosis, necrosis and genotoxicity by cosmetic preservatives: application of flow cytometry as a complementary analysis by NRU
by de Carvalho, C. M and Menezes, P. F. C and Letenski, G. C and Praes, C. E. O and Feferman, I. H. S and Lorencini, M
International Journal of Cosmetic Science, ISSN 0142-5463, 04/2012, Volume 34, Issue 2, pp. 176 - 182
Preservatives are used in cosmetics to prevent microbial contamination; however, some preservatives are not free of allergenic and cytotoxic potential.... 
cytotoxicitym | flow cytometry | assays | cosmetic preservative | in vitro | in vitro assays | CELLS | SAFETY | DNA-DAMAGE | TOXICITY | CYTOTOXICITY | DERMATOLOGY | Flow Cytometry | Apoptosis - drug effects | Humans | Mutagenicity Tests | Cells, Cultured | Inhibitory Concentration 50 | Adult | Cosmetics | In Vitro Techniques | Necrosis | Preservatives, Pharmaceutical - toxicity | Apoptosis | Index Medicus
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5. Full Text Hormone therapy failure in human prostate cancer: Analysis by complementary DNA and tissue microarrays
by Bubendorf, Lukas and Kolmer, Meelis and Kononen, Juha and Koivisto, Pasi and Mousses, Spyro and Chen, Yidong and Mahlamäki, Eija and Schraml, Peter and Moch, Holger and Willi, Niels and Elkahloun, Abdel G and Pretlow, Thomas G and Gasser, Thomas C and Mihatsch, Michael J and Sauter, Guido and Kallioniemi, Olli-P
Journal of the National Cancer Institute, ISSN 0027-8874, 10/1999, Volume 91, Issue 20, pp. 1758 - 1764
The molecular mechanisms underlying the progression of prostate cancer during hormonal therapy have remained poorly understood. In this study, we developed a... 
DNA, Complementary - analysis | Immunohistochemistry | Prostatic Neoplasms - chemistry | Humans | Neoplasm Recurrence, Local | Male | Transplantation, Heterologous | Reverse Transcriptase Polymerase Chain Reaction | DNA, Neoplasm - drug effects | Prostatic Hyperplasia - genetics | Insulin-Like Growth Factor Binding Protein 2 - genetics | Heat-Shock Proteins - genetics | Animals | Prostatic Neoplasms - genetics | Insulin-Like Growth Factor Binding Protein 2 - analysis | Mice, Nude | Antineoplastic Agents, Hormonal - therapeutic use | Treatment Failure | DNA, Neoplasm - analysis | Mice | Gene Expression Regulation, Neoplastic - drug effects | DNA, Complementary - drug effects | Heat-Shock Proteins - analysis | Prostatic Neoplasms - drug therapy | Models | Research | Hormone therapy | Gene expression | Prostate cancer | Tissue | Genes | Deoxyribonucleic acid | DNA | Genetics | Scientific imaging | Medical diagnosis | Index Medicus
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6. Full Text Generation and Initial Analysis of More Than 15,000 Full-Length Human and Mouse cDNA Sequences
by Mammalian Gene Collection (MGC) Program Team and Mammalian Gene Collection MGC Pro and Mammalian Gene Collection Program Team and Mammalian Gene Collection (MGC) Program Team
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 12/2002, Volume 99, Issue 26, pp. 16899 - 16903
The National Institutes of Health Mammalian Gene Collection (MGC) Program is a multiinstitutional effort to identify and sequence a cDNA clone containing a... 
Biological Sciences | Complementary DNA | Human genome | Genes | CDNA libraries | Genomes | Libraries | Geometric centers | Open reading frames | Nucleic acids | Sequencing | RESOURCES | HUMAN GENOME | PROGRAMS | MULTIDISCIPLINARY SCIENCES | CLONES | DNA, Complementary - analysis | Algorithms | Animals | Gene Library | Humans | Open Reading Frames | Mice | DNA, Complementary - chemistry | Sequence Analysis, DNA | Physiological aspects | Genetic research | DNA | Genetics | Deoxyribonucleic acid | Analysis | Rodents | Index Medicus
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7. Full Text DNA tetrahedron-based nanogels for siRNA delivery and gene silencing (Electronic supplementary information (ESI) available: Experimental materials and methods, sequences of DNA and siRNA, complementary gel analysis images, DLS and zeta potential images. See DOI: 10.1039/c9cc00175a)
by Han Xue and Fei Ding and Jiao Zhang and Yuanyuan Guo and Xihui Gao and Jing Feng and Xinyuan Zhu and Chuan Zhang
Chemical Communications : Chem Comm, ISSN 1359-7345, 01/2019, Volume 55, Issue 29, pp. 4222 - 4225
DNA tetrahedra are employed as building blocks to construct a novel DNA-based nanogel for intracellular siRNA delivery. With a compact architecture that embeds... 
Self assembly | Materials information | Zeta potential | Tetrahedrons | Gene expression | Deoxyribonucleic acid--DNA | Gene sequencing
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8. Full Text Isolation and Functional Analysis of Arabidopsis Stress-Inducible NAC Transcription Factors That Bind to a Drought-Responsive cis-Element in the early responsive to dehydration stress 1 Promoter
by Lam-Son Phan Tran and Kazuo Nakashima and Yoh Sakuma and Sean D. Simpson and Yasunari Fujita and Kyonoshin Maruyama and Miki Fujita and Motoaki Seki and Kazuo Shinozaki and Kazuko Yamaguchi-Shinozaki
The Plant Cell, ISSN 1040-4651, 9/2004, Volume 16, Issue 9, pp. 2481 - 2498
The MYC-like sequence CATGTG plays an important role in the dehydration-inducible expression of the Arabidopsis thaliana EARLY RESPONSIVE TO DEHYDRATION STRESS... 
Proteins | Yeasts | Complementary DNA | RNA | Genes | DNA | Dehydration | Drought | Transgenic plants | Plant cells | MOLECULAR CHARACTERIZATION | LENGTH CDNA MICROARRAY | DEHYDRATION STRESS | BIOCHEMISTRY & MOLECULAR BIOLOGY | COLD-ACCLIMATION | LOW-TEMPERATURE | PLANT SCIENCES | CELL BIOLOGY | SIGNAL-TRANSDUCTION | ACTIVATION DOMAINS | GENE-EXPRESSION | THALIANA L | FREEZING TOLERANCE | Protein Binding - genetics | DNA, Complementary - genetics | Molecular Sequence Data | Amino Acid Sequence - genetics | Promoter Regions, Genetic - genetics | Arabidopsis Proteins - metabolism | DNA-Binding Proteins - metabolism | Dehydration - genetics | Dehydration - physiopathology | DNA, Complementary - analysis | Arabidopsis Proteins - genetics | Base Sequence - genetics | Plants, Genetically Modified - genetics | Silencer Elements, Transcriptional - genetics | Up-Regulation - genetics | Saline Solution, Hypertonic - pharmacology | Binding Sites - genetics | Transcription Factors - genetics | DNA-Binding Proteins - genetics | DNA-Binding Proteins - isolation & purification | Arabidopsis - metabolism | Arabidopsis - genetics | Arabidopsis Proteins - isolation & purification | Transcription Factors - metabolism | Abscisic Acid - pharmacology | Plants, Genetically Modified - metabolism | Plant Leaves - genetics | Plant Leaves - metabolism | Transcription Factors - isolation & purification | Acclimatization - genetics | Amino Acid Motifs - genetics | Dehydration - metabolism | Arabidopsis thaliana | ATP synthesis | Genetic aspects | Dehydration (Physiology) | Analysis | Index Medicus
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9. cDNA preparation and characterization [Methods in enzymology, v. 303]
by Weissman, Sherman M
1999, Methods in enzymology ; 303., ISBN 0121822044, xv, 575 p. : ill. ; 24 cm.
Chromosome mapping | Isolation & purification | Analysis | DNA analysis | RNA, Messenger | Methods | DNA, Complementary
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10. Full Text Near-field infrared nanospectroscopy and super-resolution fluorescence microscopy enable complementary nanoscale analyses of lymphocyte nuclei
by Ajaezi, Godwin C and Eisele, Max and Contu, Fabio and Lal, Sadhana and Rangel-Pozzo, Aline and Mai, Sabine and Gough, Kathleen M
Analyst, ISSN 0003-2654, 12/2018, Volume 143, Issue 24, pp. 5926 - 5934
Recent super-resolution fluorescence microscopy (3D-Structured Illumination Microscopy, 3D-SIM) studies have revealed significantly altered nuclear... 
BUCCAL CELLS | REED-STERNBERG CELLS | TELOMERE | CHEMISTRY, ANALYTICAL | DNA ORGANIZATION | PATTERNS | CONTRAST | HODGKIN | MONOCLONAL GAMMOPATHY | SCATTERING | Spectrophotometry, Infrared - methods | Microscopy, Fluorescence - methods | Hodgkin Disease - pathology | Humans | Imaging, Three-Dimensional - methods | Cell Line, Tumor | Cell Nucleus - chemistry | Lymphocytes - cytology | Cell Nucleus - ultrastructure | Lymphocytes - chemistry | Index Medicus
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11. Full Text A single-base resolution map of an archaeal transcriptome
by Wurtzel, Omri and Sapra, Rajat and Chen, Feng and Zhu, Yiwen and Simmons, Blake A and Sorek, Rotem and Joint Bioenergy Institute (JBEI)
Genome Research, ISSN 1088-9051, 01/2010, Volume 20, Issue 1, pp. 133 - 141
Organisms of the third domain of life, the Archaea, share molecular characteristics both with Bacteria and Eukarya. These organisms attract scientific... 
BACTERIA | ENCODED ANTISENSE RNAS | BIOCHEMISTRY & MOLECULAR BIOLOGY | SULFOLOBUS-SOLFATARICUS | TRANSLATION INITIATION | MECHANISMS | IDENTIFICATION | GENOME | NONCODING RNAS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | TATA BOX | GENETICS & HEREDITY | PROMOTER | DNA, Complementary - analysis | Operon | Sulfolobus solfataricus - genetics | RNA, Messenger - genetics | DNA, Complementary - genetics | Gene Expression Regulation, Archaeal | Molecular Sequence Data | RNA, Messenger - analysis | Gene Expression Profiling | RNA, Untranslated - genetics | Sequence Analysis, DNA | Base Sequence | Transcription Initiation Site | RNA, Untranslated - analysis | Sulfolobus solfataricus - metabolism | Archaeal Proteins - genetics | DNA, Archaeal - analysis | Genetic aspects | Sulfolobus solfataricus | Genetic transcription | Research | Gene expression | Analysis | Index Medicus | Resource
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12. Full Text Gene expression in the deep biosphere
by Orsi, William D and Edgcomb, Virginia P and Christman, Glenn D and Biddle, Jennifer F
Nature, ISSN 0028-0836, 2013, Volume 499, Issue 7457, pp. 205 - 208
Scientific ocean drilling has revealed a deep biosphere of widespread microbial life in sub-seafloor sediment. Microbial metabolism in the marine subsurface... 
ARCHAEA | SEDIMENTS | BIOMASS | MULTIDISCIPLINARY SCIENCES | LIFE | ABUNDANCE | Anaerobiosis | Cell Division - genetics | DNA, Complementary - analysis | Gene Expression Regulation, Fungal | Oceans and Seas | Seawater - microbiology | Sulfates - metabolism | DNA, Complementary - genetics | Gene Expression Profiling | Transcriptome - genetics | Biomass | Colony Count, Microbial | DNA Repair - genetics | Sequence Analysis, DNA | Geologic Sediments - microbiology | Metabolic Networks and Pathways - genetics | Gene Expression Regulation, Bacterial | Water Microbiology | Physiological aspects | Piezophiles | Genetic aspects | Ecological genetics | Research | Gene expression | Cell division | Biosphere | Genomes | Nitrates | Microbiology | Index Medicus
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13. Full Text Archaea predominate among ammonia-oxidizing prokaryotes in soils
by Schuster, S. C and Schloter, M and Qi, J and Schwark, L and Schleper, C and Urich, T and Nicol, G. W and Leininger, S and Prosser, J. I
Nature, ISSN 0028-0836, 08/2006, Volume 442, Issue 7104, pp. 806 - 809
Ammonia oxidation is the first step in nitrification, a key process in the global nitrogen cycle that results in the formation of nitrate through microbial... 
REAL-TIME PCR | AMOA | BACTERIA | CRENARCHAEOTA | QUANTIFICATION | MULTIDISCIPLINARY SCIENCES | DIVERSITY | POPULATION-SIZE | 16S RIBOSOMAL-RNA | LIPIDS | TERRESTRIAL | DNA, Complementary - analysis | Gene Dosage - genetics | Bacteria - metabolism | Gene Library | Genes, Bacterial - genetics | Oxidation-Reduction | Oxidoreductases - metabolism | Ammonia - metabolism | Oxidoreductases - genetics | Soil Microbiology | DNA, Complementary - genetics | Molecular Sequence Data | RNA, Archaeal - analysis | Archaea - enzymology | Bacteria - genetics | Genes, rRNA - genetics | Genes, Archaeal - genetics | Archaea - metabolism | Prokaryotic Cells - metabolism | Ecosystem | Bacteria - enzymology | Archaea - genetics | Lipids - analysis | RNA, Archaeal - genetics | Geochemistry | Soils | Oxidation | Microbiology | Gene expression | Genomics | Index Medicus
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