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1. Full Text Chloroplast RNA polymerases: Role in chloroplast biogenesis
by Börner, Thomas and Aleynikova, Anastasia Yu and Zubo, Yan O and Kusnetsov, Victor V
BBA - Bioenergetics, ISSN 0005-2728, 09/2015, Volume 1847, Issue 9, pp. 761 - 769
Plastid genes are transcribed by two types of RNA polymerase in angiosperms: the bacterial type plastid-encoded RNA polymerase (PEP) and one (RPOTp in... 
Chloroplast biogenesis | Chloroplast RNA polymerase | Chloroplast RNA | Chloroplast development | Photosynthesis | Chloroplast transcription | BIOCHEMISTRY & MOLECULAR BIOLOGY | TRANSCRIPTION INITIATION | RIBOSOMAL-RNA | BARLEY CHLOROPLASTS | LEAF DEVELOPMENT | BIOPHYSICS | MESSENGER-RNA | NONCODING RNAS | PLASTID GENE-EXPRESSION | ENCODED SIGMA-FACTOR | COPY NUMBER | LIGHT-RESPONSIVE PROMOTER | Chloroplasts - physiology | Promoter Regions, Genetic | Transcription, Genetic | DNA-Directed RNA Polymerases - genetics | Chloroplasts - genetics | DNA-Directed RNA Polymerases - physiology | Arabidopsis thaliana | Biosynthesis | RNA | Phytochemistry | RNA polymerases
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2. Full Text Dysregulation of the basal RNA polymerase transcription apparatus in cancer
by Bywater, Megan J and Pearson, Richard B and McArthur, Grant A and Hannan, Ross D
Nature Reviews Cancer, ISSN 1474-175X, 05/2013, Volume 13, Issue 5, pp. 299 - 314
Mutations that directly affect transcription by RNA polymerases rank among the most central mediators of malignant transformation, but the frequency of new... 
BREAST-CANCER | TATA-BINDING PROTEIN | III TRANSCRIPTION | I TRANSCRIPTION | ONCOLOGY | NONCODING RNAS | COACTIVATOR COMPLEX | C-MYC | MAMMALIAN MEDIATOR COMPLEX | ELONGATION-FACTOR | RIBOSOMAL GENE-TRANSCRIPTION | Humans | Transcriptional Activation - drug effects | DNA-Directed RNA Polymerases - physiology | Gene Expression Regulation, Neoplastic | Neoplasms - enzymology | Molecular Targeted Therapy | Cell Transformation, Neoplastic - metabolism | Transcription Factors, General - genetics | Neoplasms - drug therapy | Animals | Neoplasms - genetics | Cell Transformation, Neoplastic - genetics | Antineoplastic Agents - pharmacology | Mutation | Oncogenes | Transcription Factors, General - metabolism | Physiological aspects | Genetic aspects | Research | Genetic transcription | RNA polymerases | Cancer
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3. Full Text Sequence-Resolved Detection of Pausing by Single RNA Polymerase Molecules
by Herbert, Kristina M and La Porta, Arthur and Wong, Becky J and Mooney, Rachel A and Neuman, Keir C and Landick, Robert and Block, Steven M
Cell, ISSN 0092-8674, 2006, Volume 125, Issue 6, pp. 1083 - 1094
Transcriptional pausing by RNA polymerase (RNAP) plays an important role in the regulation of gene expression. Defined, sequence-specific pause sites have been... 
Promoter Regions, Genetic | Base Sequence | DNA-Directed RNA Polymerases - physiology | Templates, Genetic | Transcription, Genetic | DNA-Directed RNA Polymerases - genetics | Sequence Analysis, DNA | Nucleotide sequence | RNA polymerases | Research | RNA | Gene expression | Analysis | DNA
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4. Full Text PolIVb Influences RNA-Directed DNA Methylation Independently of Its Role in siRNA Biogenesis
by Rebecca A. Mosher and Frank Schwach and David Studholme and David C. Baulcombe
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 2/2008, Volume 105, Issue 8, pp. 3145 - 3150
DNA-dependent RNA polymerase (Pol)IV in Arabidopsis exists in two isoforms (PolIVa and PolIVb), with NRPD1a and NRPD1b as their respective largest subunits.... 
Protein isoforms | Transposons | RNA | DNA | Small interfering RNA | Epigenetics | Genetic loci | Genomes | Methylation | Polls | Demethylation | RNA polymerase IV | RNA silencing | ARABIDOPSIS-THALIANA | METHYLTRANSFERASE | POLYMERASE-IV | MULTIDISCIPLINARY SCIENCES | PROCESSING CENTER | GENOME | demethylation | MAINTENANCE | HETEROCHROMATIN | ARGONAUTE4 | REPEATS | RNA, Small Interfering - genetics | Arabidopsis Proteins - genetics | Arabidopsis Proteins - physiology | Arabidopsis - enzymology | DNA-Directed RNA Polymerases - physiology | Molecular Sequence Data | DNA-Directed RNA Polymerases - genetics | Sequence Analysis, DNA | Arabidopsis - genetics | Blotting, Northern | DNA Methylation | Base Sequence | RNA, Small Interfering - biosynthesis | Chromatin Assembly and Disassembly - physiology | Protein Subunits - genetics | Chromatin | Gene loci | RNA polymerase | Flowers & plants | Mutation | Deoxyribonucleic acid--DNA | Biological Sciences
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5. Full Text Structural basis of transcription inhibition by α-amanitin and implications for RNA polymerase II translocation
by Brueckner, Florian and Cramer, Patrick
Nature Structural and Molecular Biology, ISSN 1545-9993, 08/2008, Volume 15, Issue 8, pp. 811 - 818
To study how RNA polymerase II translocates after nucleotide incorporation, we prepared elongation complex crystals in which pre- and post-translocation states... 
ROTATION | TRIGGER LOOP | SITE | MECHANISM | ELONGATION COMPLEX | BIOCHEMISTRY & MOLECULAR BIOLOGY | MODEL | CELL BIOLOGY | ANGSTROM RESOLUTION | BIOPHYSICS | DNA | ACTIVE-CENTER | SELECTION | Protein Structure, Tertiary | Molecular Conformation | DNA-Directed RNA Polymerases - physiology | RNA Polymerase II - physiology | RNA Polymerase II - metabolism | Leucine - chemistry | Protein Transport | Crystallography, X-Ray - methods | Saccharomyces cerevisiae - metabolism | Alpha-Amanitin - chemistry | Hydrogen Bonding | Models, Biological | Protein Conformation | Transcription, Genetic | DNA-Directed RNA Polymerases - chemistry | Binding Sites | Index Medicus
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6. Full Text Role of RNA Polymerase IV in Plant Small RNA Metabolism
by Xiaoyu Zhang and Ian R. Henderson and Cheng Lu and Pamela J. Green and Steven E. Jacobsen
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 3/2007, Volume 104, Issue 11, pp. 4536 - 4541
In addition to the three RNA polymerases (RNAP I-III) shared by all eukaryotic organisms, plant genomes encode a fourth RNAP (RNAP IV) that appears to be... 
RNA precursors | MicroRNA | RNA | DNA | Genomics | Small interfering RNA | Genetic loci | Genomes | Methylation | Sequencing | DNA methylation | Gene silencing | RNA interference | Epigenetic | Arabidopsis | DIRECTED DNA METHYLATION | ARABIDOPSIS-THALIANA | DICER-LIKE-4 | epigenetic | MULTIDISCIPLINARY SCIENCES | gene silencing | PROCESSING CENTER | HISTONE METHYLATION | BIOGENESIS | TRANS-ACTING SIRNAS | HETEROCHROMATIN FORMATION | ACCUMULATION | ARGONAUTE4 | RNA, Plant | Arabidopsis Proteins - genetics | Ribonuclease III - genetics | Genes, Plant | Epigenesis, Genetic | DNA-Directed RNA Polymerases - physiology | Gene Silencing | Molecular Sequence Data | DNA-Directed RNA Polymerases - genetics | Genome, Plant | Arabidopsis - genetics | DNA Methylation | RNA Interference | Base Sequence | Argonaute Proteins | Plant Physiological Phenomena | RNA, Small Interfering - metabolism | Arabidopsis thaliana | Genetic aspects | Research | RNA polymerases | Plant genetics | Proteins | Eukaryotes | Biochemistry | RNA polymerase | Ribonucleic acid--RNA | Metabolism | Biological Sciences
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7. Full Text Histone Chaperone Spt16 Promotes Redeposition of the Original H3-H4 Histones Evicted by Elongating RNA Polymerase
by Jamai, Adil and Puglisi, Andrea and Strubin, Michel
Molecular Cell, ISSN 1097-2765, 2009, Volume 35, Issue 3, pp. 377 - 383
Nucleosomes are surprisingly dynamic structures in vivo, showing transcription-independent exchange of histones H2A-H2B genome-wide and exchange of H3-H4... 
DNA | Saccharomyces cerevisiae - metabolism | Transcriptional Elongation Factors - metabolism | Histones - genetics | Saccharomyces cerevisiae - genetics | Transcriptional Elongation Factors - physiology | DNA-Directed RNA Polymerases - physiology | Saccharomyces cerevisiae Proteins - metabolism | Saccharomyces cerevisiae Proteins - physiology | Histones - metabolism | Chromatin Assembly and Disassembly - physiology | Histones | Nucleosomes | DNA binding proteins | RNA | Genomics
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8. Full Text Growth-Rate-Dependent Partitioning of RNA Polymerases in Bacteria
by Stefan Klumpp and Terence Hwa
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 12/2008, Volume 105, Issue 51, pp. 20245 - 20250
Physiological changes that result in changes in bacterial gene expression are often accompanied by changes in the growth rate for fast adapting enteric... 
Cell growth | Starvation | Messenger RNA | RNA | DNA | Escherichia coli | Operons | Biosynthesis | Gene expression regulation | Parametric models | Stringent response | Transcription | Ribosomal RNA | Constitutive promoters | transcription | constitutive promoters | MULTIDISCIPLINARY SCIENCES | stringent response | ESCHERICHIA-COLI | ANTITERMINATION | PPGPP | ribosomal RNA | PROMOTERS | DKSA | COMPETITION | IN-VIVO | TRANSCRIPTION ELONGATION RATE | BINDING | Promoter Regions, Genetic | Bacteria - growth & development | Escherichia coli Proteins | Operon | RNA, Ribosomal | DNA-Directed RNA Polymerases - physiology | Gene Expression Regulation | Bacteria - enzymology | Analysis | Genetic aspects | Genetic transcription | Research | Gene expression | Biological control systems | RNA polymerases | Amino acids | RNA polymerase | E coli | Ribonucleic acid--RNA | Quantitative Biology - Subcellular Processes | Biological Sciences
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9. Full Text A Mechanism for the Activation of the Influenza Virus Transcriptase
by Serna Martin, Itziar and Hengrung, Narin and Renner, Max and Sharps, Jane and Martínez-Alonso, Mónica and Masiulis, Simonas and Grimes, Jonathan M and Fodor, Ervin
Molecular Cell, ISSN 1097-2765, 06/2018, Volume 70, Issue 6, pp. 1101 - 1110.e4
Influenza virus RNA polymerase (FluPol), a heterotrimer composed of PB1, PB2, and PA subunits (P3 in influenza C), performs both transcription and replication... 
replication | Pol II | CTD | transcription | influenza virus | cap snatching | RNA polymerase | transcriptase | RNA-POLYMERASE-II | SYSTEM | PA SUBUNIT | INTRINSIC DISORDER | DOMAIN | REPLICATION | BIOCHEMISTRY & MOLECULAR BIOLOGY | INSIGHTS | CELL BIOLOGY | RNA Replicase - genetics | Humans | Influenzavirus C - ultrastructure | DNA-Directed RNA Polymerases - physiology | Viral Proteins - genetics | RNA Polymerase II - physiology | DNA-Directed RNA Polymerases - genetics | RNA Polymerase II - metabolism | Protein Domains - physiology | Virus Replication | Protein Binding | Transcription, Genetic | RNA, Viral - metabolism | Influenzavirus C - genetics | RNA Caps - genetics | Influenza viruses | Messenger RNA | Peptides | Analysis | Influenza | Genomics | Genetic transcription
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10. Full Text Viral determinants of influenza A virus host range
by Cauldwell, Anna V and Long, Jason S and Moncorgé, Olivier and Barclay, Wendy S
Journal of General Virology, ISSN 0022-1317, 2014, Volume 95, Issue 6, pp. 1193 - 1210
Typical avian influenza A viruses are restricted from replicating efficiently and causing disease in humans. However, an avian virus can become adapted to... 
SINGLE AMINO-ACID | SWINE INFLUENZA | VIROLOGY | RNA REPLICATION | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | RIG-I | PANDEMIC H1N1 | POLYMERASE-ACTIVITY | RESPIRATORY DROPLET TRANSMISSION | MAMMALIAN-CELLS | RECEPTOR-BINDING | STALK-LENGTH | Adaptation, Physiological | Hemagglutinin Glycoproteins, Influenza Virus - physiology | Humans | Influenza A virus - genetics | Nucleoproteins - genetics | Neuraminidase - genetics | Influenza in Birds - immunology | Hemagglutinin Glycoproteins, Influenza Virus - genetics | Nucleoproteins - physiology | Genes, Viral | Viral Proteins - physiology | Influenza A virus - pathogenicity | Influenza, Human - virology | Neuraminidase - physiology | Influenza A virus - physiology | DNA-Directed RNA Polymerases - physiology | Host Specificity - immunology | Host Specificity - physiology | Viral Proteins - genetics | Birds | DNA-Directed RNA Polymerases - genetics | Immunity, Innate | Animals | Host Specificity - genetics | Influenza in Birds - virology | Mutation | Influenza, Human - immunology
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